RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 MPHOSPH8Q99549 860 aa13.03□□□□□ -0.32
PFDN1-203ENST00000510217 LEMD3Q9Y2U8 911 aa13.03□□□□□ -0.32
PFDN1-203ENST00000510217 UTYO14607 1347 aa13.03□□□□□ -0.32
PFDN1-203ENST00000510217 VEGFBP49765 207 aa13.02□□□□□ -0.33
PFDN1-203ENST00000510217 IFIT5Q13325 482 aaKnown RBP13.02□□□□□ -0.33
PFDN1-203ENST00000510217 KIF4BQ2VIQ3 1234 aa13.02□□□□□ -0.33
PFDN1-203ENST00000510217 PODNQ7Z5L7 613 aa13.02□□□□□ -0.33
PFDN1-203ENST00000510217 KAZALD1Q96I82 304 aa13.02□□□□□ -0.33
PFDN1-203ENST00000510217 GMLQ99445 158 aa13.02□□□□□ -0.33
PFDN1-203ENST00000510217 ANKRD2Q9GZV1 360 aa13.02□□□□□ -0.33
PFDN1-203ENST00000510217 C9orf78Q9NZ63 289 aaPredicted RBP13.02□□□□□ -0.33
PFDN1-203ENST00000510217 ABT1Q9ULW3 272 aaKnown RBP13.02□□□□□ -0.33
PFDN1-203ENST00000510217 CHMP3Q9Y3E7 222 aa13.02□□□□□ -0.33
PFDN1-203ENST00000510217 ZNF804BA4D1E1 1349 aa13.02□□□□□ -0.33
PFDN1-203ENST00000510217 IRS2Q9Y4H2 1338 aa13.02□□□□□ -0.33
PFDN1-203ENST00000510217 USP17L3A6NCW0 530 aa13.01□□□□□ -0.33
PFDN1-203ENST00000510217 USP17L4A6NCW7 530 aa13.01□□□□□ -0.33
PFDN1-203ENST00000510217 NBPF7P0C2Y1 421 aaPredicted RBP13.01□□□□□ -0.33
PFDN1-203ENST00000510217 ZNF280AP59817 542 aaPredicted RBP13.01□□□□□ -0.33
PFDN1-203ENST00000510217 ALDH1L2Q3SY69 923 aa13.01□□□□□ -0.33
PFDN1-203ENST00000510217 USP17L1Q7RTZ2 530 aa13.01□□□□□ -0.33
PFDN1-203ENST00000510217 AGBL3Q8NEM8 1001 aa13.01□□□□□ -0.33
PFDN1-203ENST00000510217 COA1Q9GZY4 146 aa13.01□□□□□ -0.33
PFDN1-203ENST00000510217 ARAP2Q8WZ64 1704 aa13.01□□□□□ -0.33
PFDN1-203ENST00000510217 POLR2AP24928 1970 aaKnown RBP13.01□□□□□ -0.33
PFDN1-203ENST00000510217 SNAP23O00161 211 aa13□□□□□ -0.33
PFDN1-203ENST00000510217 DEFB115Q30KQ5 88 aa13□□□□□ -0.33
PFDN1-203ENST00000510217 DACT2Q5SW24 774 aa13□□□□□ -0.33
PFDN1-203ENST00000510217 ZNF594Q96JF6 807 aaPredicted RBP13□□□□□ -0.33
PFDN1-203ENST00000510217 SMC4Q9NTJ3 1288 aa13□□□□□ -0.33
PFDN1-203ENST00000510217 TLL2Q9Y6L7 1015 aa13□□□□□ -0.33
PFDN1-203ENST00000510217 ASTN2O75129 1339 aaPredicted RBP12.99□□□□□ -0.33
PFDN1-203ENST00000510217 TAF5LO75529 589 aa12.99□□□□□ -0.33
PFDN1-203ENST00000510217 CELF2O95319 508 aaKnown RBP12.99□□□□□ -0.33
PFDN1-203ENST00000510217 CCDC57Q2TAC2 916 aa12.99□□□□□ -0.33
PFDN1-203ENST00000510217 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
PFDN1-203ENST00000510217 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
PFDN1-203ENST00000510217 DLK2Q6UY11 383 aa12.99□□□□□ -0.33
PFDN1-203ENST00000510217 CDC37L1Q7L3B6 337 aa12.99□□□□□ -0.33
PFDN1-203ENST00000510217 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
PFDN1-203ENST00000510217 MXD3Q9BW11 206 aa12.99□□□□□ -0.33
PFDN1-203ENST00000510217 BICC1Q9H694 974 aaKnown RBP12.99□□□□□ -0.33
PFDN1-203ENST00000510217 GGA3Q9NZ52 723 aa12.99□□□□□ -0.33
PFDN1-203ENST00000510217 WDR33Q9C0J8 1336 aaKnown RBP12.98□□□□□ -0.33
PFDN1-203ENST00000510217 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
PFDN1-203ENST00000510217 CT47B1P0C2W7 299 aaPredicted RBP12.98□□□□□ -0.33
PFDN1-203ENST00000510217 KCNJ4P48050 445 aa12.98□□□□□ -0.33
PFDN1-203ENST00000510217 TAF7LQ5H9L4 462 aa12.98□□□□□ -0.33
PFDN1-203ENST00000510217 C15orf52Q6ZUT6 534 aaKnown RBP12.98□□□□□ -0.33
PFDN1-203ENST00000510217 KRT26Q7Z3Y9 468 aa12.98□□□□□ -0.33
PFDN1-203ENST00000510217 SAPCD2Q86UD0 394 aa12.98□□□□□ -0.33
PFDN1-203ENST00000510217 USP48Q86UV5 1035 aa12.98□□□□□ -0.33
PFDN1-203ENST00000510217 ANKRD44Q8N8A2 993 aa12.98□□□□□ -0.33
PFDN1-203ENST00000510217 ZNF408Q9H9D4 720 aa12.98□□□□□ -0.33
PFDN1-203ENST00000510217 ECM29Q5VYK3 1845 aa12.97□□□□□ -0.33
PFDN1-203ENST00000510217 MYO3BQ8WXR4 1341 aa12.97□□□□□ -0.33
PFDN1-203ENST00000510217 USP17L8P0C7I0 530 aa12.97□□□□□ -0.33
PFDN1-203ENST00000510217 COL13A1Q5TAT6 717 aaPredicted RBP12.97□□□□□ -0.33
PFDN1-203ENST00000510217 STRIP1Q5VSL9 837 aa12.97□□□□□ -0.33
PFDN1-203ENST00000510217 CYP4F22Q6NT55 531 aa12.97□□□□□ -0.33
PFDN1-203ENST00000510217 LDHAL6AQ6ZMR3 332 aa12.97□□□□□ -0.33
PFDN1-203ENST00000510217 FBXW7Q969H0 707 aa12.97□□□□□ -0.33
PFDN1-203ENST00000510217 MYOZ2Q9NPC6 264 aa12.97□□□□□ -0.33
PFDN1-203ENST00000510217 FOXN1O15353 648 aa12.96□□□□□ -0.33
PFDN1-203ENST00000510217 IFFO2Q5TF58 517 aa12.96□□□□□ -0.33
PFDN1-203ENST00000510217 ANGEL2Q5VTE6 544 aaKnown RBP12.96□□□□□ -0.33
PFDN1-203ENST00000510217 DCPSQ96C86 337 aaKnown RBP12.96□□□□□ -0.33
PFDN1-203ENST00000510217 CAPNS2Q96L46 248 aa12.96□□□□□ -0.33
PFDN1-203ENST00000510217 PUS3Q9BZE2 481 aaKnown RBP12.96□□□□□ -0.33
PFDN1-203ENST00000510217 USP44Q9H0E7 712 aa12.96□□□□□ -0.33
PFDN1-203ENST00000510217 CD209Q9NNX6 404 aa12.96□□□□□ -0.33
PFDN1-203ENST00000510217 CNNM1Q9NRU3 951 aa12.96□□□□□ -0.33
PFDN1-203ENST00000510217 PAPPA2Q9BXP8 1791 aa12.96□□□□□ -0.34
PFDN1-203ENST00000510217 BRPF1P55201 1214 aaPredicted RBP12.95□□□□□ -0.34
PFDN1-203ENST00000510217 GTF2IP78347 998 aa12.95□□□□□ -0.34
PFDN1-203ENST00000510217 SCARF1Q14162 830 aa12.95□□□□□ -0.34
PFDN1-203ENST00000510217 PAXIP1Q6ZW49 1069 aaPredicted RBP12.95□□□□□ -0.34
PFDN1-203ENST00000510217 HHIPL1Q96JK4 782 aa12.95□□□□□ -0.34
PFDN1-203ENST00000510217 WBP1LQ9NX94 342 aa12.95□□□□□ -0.34
PFDN1-203ENST00000510217 PITPNM2Q9BZ72 1349 aa12.94□□□□□ -0.34
PFDN1-203ENST00000510217 PLIN1O60240 522 aa12.94□□□□□ -0.34
PFDN1-203ENST00000510217 IL1R1P14778 569 aa12.94□□□□□ -0.34
PFDN1-203ENST00000510217 ECE1P42892 770 aa12.94□□□□□ -0.34
PFDN1-203ENST00000510217 RARSP54136 660 aaKnown RBP12.94□□□□□ -0.34
PFDN1-203ENST00000510217 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
PFDN1-203ENST00000510217 ZNF804AQ7Z570 1209 aa12.94□□□□□ -0.34
PFDN1-203ENST00000510217 SULF1Q8IWU6 871 aa12.94□□□□□ -0.34
PFDN1-203ENST00000510217 CERS5Q8N5B7 392 aa12.94□□□□□ -0.34
PFDN1-203ENST00000510217 NOB1Q9ULX3 412 aaKnown RBP12.94□□□□□ -0.34
PFDN1-203ENST00000510217 RIPOR2Q9Y4F9 1068 aa12.94□□□□□ -0.34
PFDN1-203ENST00000510217 WNT10BO00744 389 aa12.93□□□□□ -0.34
PFDN1-203ENST00000510217 GRM1Q13255 1194 aa12.93□□□□□ -0.34
PFDN1-203ENST00000510217 NBPF9Q3BBW0 867 aa12.93□□□□□ -0.34
PFDN1-203ENST00000510217 LRRC24Q50LG9 513 aa12.93□□□□□ -0.34
PFDN1-203ENST00000510217 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
PFDN1-203ENST00000510217 KIAA0825Q8IV33 1275 aa12.93□□□□□ -0.34
PFDN1-203ENST00000510217 VGLL2Q8N8G2 317 aa12.93□□□□□ -0.34
PFDN1-203ENST00000510217 CDCA5Q96FF9 252 aa12.93□□□□□ -0.34
PFDN1-203ENST00000510217 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
PFDN1-203ENST00000510217 KIF16BQ96L93 1317 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms