RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 SLFNL1Q499Z3 407 aa21.04■□□□□ 0.96
SFXN1-208ENST00000507823 C8orf37Q96NL8 207 aa21.04■□□□□ 0.96
SFXN1-208ENST00000507823 M0R2C6 588 aa21.03■□□□□ 0.96
SFXN1-208ENST00000507823 ZNF445P59923 1031 aa21.03■□□□□ 0.96
SFXN1-208ENST00000507823 FKBP4Q02790 459 aaKnown RBP eCLIP21.03■□□□□ 0.96
SFXN1-208ENST00000507823 GPT2Q8TD30 523 aa21.03■□□□□ 0.96
SFXN1-208ENST00000507823 GJB2P29033 226 aa21.03■□□□□ 0.96
SFXN1-208ENST00000507823 MCAMP43121 646 aa21.03■□□□□ 0.96
SFXN1-208ENST00000507823 PUM3Q15397 648 aaKnown RBP21.03■□□□□ 0.96
SFXN1-208ENST00000507823 STOX1Q6ZVD7 989 aa21.03■□□□□ 0.96
SFXN1-208ENST00000507823 LINC00116Q8NCU8 138 aa21.03■□□□□ 0.96
SFXN1-208ENST00000507823 LPIN2Q92539 896 aa21.03■□□□□ 0.96
SFXN1-208ENST00000507823 APPBP2Q92624 585 aa21.03■□□□□ 0.96
SFXN1-208ENST00000507823 AGXT2Q9BYV1 514 aa21.03■□□□□ 0.96
SFXN1-208ENST00000507823 ZNF652Q9Y2D9 606 aa21.03■□□□□ 0.96
SFXN1-208ENST00000507823 BTAF1O14981 1849 aa21.02■□□□□ 0.96
SFXN1-208ENST00000507823 FOXP2O15409 715 aa21.01■□□□□ 0.95
SFXN1-208ENST00000507823 MBD3O95983 291 aa21.01■□□□□ 0.95
SFXN1-208ENST00000507823 HCLS1P14317 486 aaPredicted RBP21.01■□□□□ 0.95
SFXN1-208ENST00000507823 CHAMP1Q96JM3 812 aa21.01■□□□□ 0.95
SFXN1-208ENST00000507823 NIP7Q9Y221 180 aaKnown RBP eCLIP21.01■□□□□ 0.95
SFXN1-208ENST00000507823 UQCRFS1P1P0C7P4 283 aa21.01■□□□□ 0.95
SFXN1-208ENST00000507823 TTF1Q15361 905 aaPredicted RBP21.01■□□□□ 0.95
SFXN1-208ENST00000507823 CCDC152Q4G0S7 254 aa21.01■□□□□ 0.95
SFXN1-208ENST00000507823 RC3H1Q5TC82 1133 aaKnown RBP21.01■□□□□ 0.95
SFXN1-208ENST00000507823 FOXD4L5Q5VV16 416 aaPredicted RBP21.01■□□□□ 0.95
SFXN1-208ENST00000507823 GAS2L3Q86XJ1 694 aa21.01■□□□□ 0.95
SFXN1-208ENST00000507823 FOXD4L4Q8WXT5 416 aaPredicted RBP21.01■□□□□ 0.95
SFXN1-208ENST00000507823 MTMR6Q9Y217 621 aa21.01■□□□□ 0.95
SFXN1-208ENST00000507823 A0A0G2JS52 829 aa21■□□□□ 0.95
SFXN1-208ENST00000507823 F13A1P00488 732 aa21■□□□□ 0.95
SFXN1-208ENST00000507823 FBXL16Q8N461 479 aa21■□□□□ 0.95
SFXN1-208ENST00000507823 DOCK2Q92608 1830 aa21■□□□□ 0.95
SFXN1-208ENST00000507823 EXOSC10Q01780 885 aaKnown RBP21■□□□□ 0.95
SFXN1-208ENST00000507823 NECAB1Q8N987 351 aa21■□□□□ 0.95
SFXN1-208ENST00000507823 GRPEL1Q9HAV7 217 aa21■□□□□ 0.95
SFXN1-208ENST00000507823 TCHHQ07283 1943 aa20.99■□□□□ 0.95
SFXN1-208ENST00000507823 CCDC102BQ68D86 513 aa20.99■□□□□ 0.95
SFXN1-208ENST00000507823 DHX32Q7L7V1 743 aaKnown RBP20.99■□□□□ 0.95
SFXN1-208ENST00000507823 BRPF3Q9ULD4 1205 aa20.99■□□□□ 0.95
SFXN1-208ENST00000507823 ZSCAN25Q6NSZ9 544 aa20.99■□□□□ 0.95
SFXN1-208ENST00000507823 TCEANC2Q96MN5 208 aa20.99■□□□□ 0.95
SFXN1-208ENST00000507823 ADD2P35612 726 aa20.98■□□□□ 0.95
SFXN1-208ENST00000507823 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.98■□□□□ 0.952e-6■□□□□ 11.2
SFXN1-208ENST00000507823 ATP6V1DQ9Y5K8 247 aa20.98■□□□□ 0.95
SFXN1-208ENST00000507823 COL24A1Q17RW2 1714 aa20.98■□□□□ 0.95
SFXN1-208ENST00000507823 PI16Q6UXB8 463 aa20.98■□□□□ 0.95
SFXN1-208ENST00000507823 GTF3C6Q969F1 213 aa20.98■□□□□ 0.95
SFXN1-208ENST00000507823 CTNNA3Q9UI47 895 aa20.98■□□□□ 0.95
SFXN1-208ENST00000507823 A0A1B0GUL6 1792 aa20.98■□□□□ 0.95
SFXN1-208ENST00000507823 CASZ1Q86V15 1759 aa20.98■□□□□ 0.95
SFXN1-208ENST00000507823 UBE3CQ15386 1083 aa20.97■□□□□ 0.95
SFXN1-208ENST00000507823 LY75O60449 1722 aa20.97■□□□□ 0.95
SFXN1-208ENST00000507823 E7EWF7 191 aa20.97■□□□□ 0.95
SFXN1-208ENST00000507823 PHKA1P46020 1223 aa20.97■□□□□ 0.95
SFXN1-208ENST00000507823 Q6ZUG5 572 aa20.97■□□□□ 0.95
SFXN1-208ENST00000507823 SEC31BQ9NQW1 1179 aa20.97■□□□□ 0.95
SFXN1-208ENST00000507823 MYO5AQ9Y4I1 1855 aaKnown RBP20.97■□□□□ 0.95
SFXN1-208ENST00000507823 SLC5A1P13866 664 aa20.96■□□□□ 0.95
SFXN1-208ENST00000507823 PDCP20941 246 aa20.96■□□□□ 0.95
SFXN1-208ENST00000507823 ZSCAN23Q3MJ62 389 aa20.96■□□□□ 0.95
SFXN1-208ENST00000507823 USP21Q9UK80 565 aa20.96■□□□□ 0.95
SFXN1-208ENST00000507823 SF3B3Q15393 1217 aaKnown RBP20.96■□□□□ 0.95
SFXN1-208ENST00000507823 CAVIN1Q6NZI2 390 aaKnown RBP20.96■□□□□ 0.95
SFXN1-208ENST00000507823 PUS7LQ9H0K6 701 aaKnown RBP20.96■□□□□ 0.95
SFXN1-208ENST00000507823 SLC10A5Q5PT55 438 aa20.95■□□□□ 0.94
SFXN1-208ENST00000507823 MPHOSPH8Q99549 860 aa20.95■□□□□ 0.94
SFXN1-208ENST00000507823 PIH1D3Q9NQM4 214 aaKnown RBP20.95■□□□□ 0.94
SFXN1-208ENST00000507823 WASHC4Q2M389 1173 aa20.94■□□□□ 0.94
SFXN1-208ENST00000507823 SBF2Q86WG5 1849 aa20.94■□□□□ 0.94
SFXN1-208ENST00000507823 TAF1LQ8IZX4 1826 aa20.94■□□□□ 0.94
SFXN1-208ENST00000507823 PFKFB2O60825 505 aa20.94■□□□□ 0.94
SFXN1-208ENST00000507823 RPS6KA4O75676 772 aa20.94■□□□□ 0.94
SFXN1-208ENST00000507823 EVCP57679 992 aa20.94■□□□□ 0.94
SFXN1-208ENST00000507823 LLPHQ9BRT6 129 aaKnown RBP20.94■□□□□ 0.94
SFXN1-208ENST00000507823 BCL2L12Q9HB09 334 aa20.94■□□□□ 0.94
SFXN1-208ENST00000507823 NSFL1CQ9UNZ2 370 aaKnown RBP20.94■□□□□ 0.94
SFXN1-208ENST00000507823 COL4A1P02462 1669 aa20.94■□□□□ 0.94
SFXN1-208ENST00000507823 A0A0G2JLW4 131 aa20.93■□□□□ 0.94
SFXN1-208ENST00000507823 TCRBV5S4A2TA0A5A2 114 aa20.93■□□□□ 0.94
SFXN1-208ENST00000507823 GPAA1O43292 621 aa20.93■□□□□ 0.94
SFXN1-208ENST00000507823 IGHMBP2P38935 993 aaKnown RBP20.93■□□□□ 0.94
SFXN1-208ENST00000507823 USP48Q86UV5 1035 aa20.93■□□□□ 0.94
SFXN1-208ENST00000507823 PTF1AQ7RTS3 328 aa20.93■□□□□ 0.94
SFXN1-208ENST00000507823 TMEM63CQ9P1W3 806 aa20.93■□□□□ 0.94
SFXN1-208ENST00000507823 FGAP02671 866 aa20.92■□□□□ 0.94
SFXN1-208ENST00000507823 SMARCC2Q8TAQ2 1214 aa20.92■□□□□ 0.94
SFXN1-208ENST00000507823 NARFQ9UHQ1 456 aa20.92■□□□□ 0.94
SFXN1-208ENST00000507823 ONECUT3O60422 494 aaPredicted RBP20.92■□□□□ 0.94
SFXN1-208ENST00000507823 LARP1BQ659C4 914 aaKnown RBP20.92■□□□□ 0.94
SFXN1-208ENST00000507823 TTLL5Q6EMB2 1281 aa20.92■□□□□ 0.94
SFXN1-208ENST00000507823 HELBQ8NG08 1087 aaPredicted RBP20.92■□□□□ 0.94
SFXN1-208ENST00000507823 WDR19Q8NEZ3 1342 aa20.92■□□□□ 0.94
SFXN1-208ENST00000507823 FAM177BA6PVY3 158 aa20.91■□□□□ 0.94
SFXN1-208ENST00000507823 IMMTQ16891 758 aaKnown RBP20.91■□□□□ 0.94
SFXN1-208ENST00000507823 BRF1Q92994 677 aa20.91■□□□□ 0.94
SFXN1-208ENST00000507823 CDC5LQ99459 802 aaKnown RBP20.91■□□□□ 0.94
SFXN1-208ENST00000507823 SPATA5Q8NB90 893 aa20.91■□□□□ 0.94
SFXN1-208ENST00000507823 ZMYM6O95789 1325 aa20.91■□□□□ 0.94
SFXN1-208ENST00000507823 PDE6AP16499 860 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms