RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 TRMT112Q9UI30 125 aaKnown RBP26.03■■□□□ 1.76
SPCS3-203ENST00000507678 LIG1P18858 919 aa26.02■■□□□ 1.76
SPCS3-203ENST00000507678 NLRP10Q86W26 655 aa26.02■■□□□ 1.76
SPCS3-203ENST00000507678 GPHNQ9NQX3 736 aaPredicted RBP26.01■■□□□ 1.75
SPCS3-203ENST00000507678 ATP2B3Q16720 1220 aa26.01■■□□□ 1.75
SPCS3-203ENST00000507678 EXOC5O00471 708 aa26■■□□□ 1.75
SPCS3-203ENST00000507678 CYP19A1P11511 503 aaPredicted RBP26■■□□□ 1.75
SPCS3-203ENST00000507678 GUCY1B3Q02153 619 aa26■■□□□ 1.75
SPCS3-203ENST00000507678 TRIM28Q13263 835 aaKnown RBP26■■□□□ 1.75
SPCS3-203ENST00000507678 IRS4O14654 1257 aaPredicted RBP26■■□□□ 1.75
SPCS3-203ENST00000507678 LETM1O95202 739 aaPredicted RBP26■■□□□ 1.75
SPCS3-203ENST00000507678 TTLL11Q8NHH1 800 aa26■■□□□ 1.75
SPCS3-203ENST00000507678 EIF2AK3Q9NZJ5 1116 aaKnown RBP26■■□□□ 1.75
SPCS3-203ENST00000507678 HMGB1P09429 215 aaKnown RBP25.99■■□□□ 1.75
SPCS3-203ENST00000507678 RAB11FIP4Q86YS3 637 aa25.99■■□□□ 1.75
SPCS3-203ENST00000507678 PUS7LQ9H0K6 701 aaKnown RBP25.99■■□□□ 1.75
SPCS3-203ENST00000507678 CSF1RP07333 972 aa25.99■■□□□ 1.75
SPCS3-203ENST00000507678 HELBQ8NG08 1087 aaPredicted RBP25.99■■□□□ 1.75
SPCS3-203ENST00000507678 TAOK2Q9UL54 1235 aa25.99■■□□□ 1.75
SPCS3-203ENST00000507678 NOL7Q9UMY1 257 aaKnown RBP25.99■■□□□ 1.75
SPCS3-203ENST00000507678 CKAP2LQ8IYA6 745 aa25.98■■□□□ 1.75
SPCS3-203ENST00000507678 PTPDC1A2A3K4 754 aa25.97■■□□□ 1.75
SPCS3-203ENST00000507678 ADAMTS2O95450 1211 aa25.97■■□□□ 1.75
SPCS3-203ENST00000507678 CTSWP56202 376 aa25.97■■□□□ 1.75
SPCS3-203ENST00000507678 DZIP3Q86Y13 1208 aaKnown RBP25.97■■□□□ 1.75
SPCS3-203ENST00000507678 LEO1Q8WVC0 666 aaPredicted RBP25.97■■□□□ 1.75
SPCS3-203ENST00000507678 ACSBG1Q96GR2 724 aa25.97■■□□□ 1.75
SPCS3-203ENST00000507678 DACT1Q9NYF0 836 aa25.97■■□□□ 1.75
SPCS3-203ENST00000507678 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.97■■□□□ 1.75
SPCS3-203ENST00000507678 ANKRD18BA2A2Z9 1011 aa25.97■■□□□ 1.75
SPCS3-203ENST00000507678 BICD2Q8TD16 824 aa25.97■■□□□ 1.75
SPCS3-203ENST00000507678 CCDC39Q9UFE4 941 aa25.97■■□□□ 1.75
SPCS3-203ENST00000507678 NSUN7Q8NE18 718 aaKnown RBP25.96■■□□□ 1.75
SPCS3-203ENST00000507678 SCAND2PQ9GZW5 306 aaPredicted RBP25.96■■□□□ 1.75
SPCS3-203ENST00000507678 PFKFB2O60825 505 aa25.96■■□□□ 1.75
SPCS3-203ENST00000507678 CTDNEP1O95476 244 aa25.96■■□□□ 1.75
SPCS3-203ENST00000507678 MCAMP43121 646 aa25.96■■□□□ 1.75
SPCS3-203ENST00000507678 EXOSC10Q01780 885 aaKnown RBP25.96■■□□□ 1.75
SPCS3-203ENST00000507678 FTOQ9C0B1 505 aaKnown RBP eCLIP25.96■■□□□ 1.75
SPCS3-203ENST00000507678 HS1BP3Q53T59 392 aa25.95■■□□□ 1.75
SPCS3-203ENST00000507678 ZNF830Q96NB3 372 aaPredicted RBP25.95■■□□□ 1.75
SPCS3-203ENST00000507678 NUP62CLQ9H1M0 184 aa25.95■■□□□ 1.75
SPCS3-203ENST00000507678 RIPOR2Q9Y4F9 1068 aa25.95■■□□□ 1.75
SPCS3-203ENST00000507678 ADCY5O95622 1261 aa25.95■■□□□ 1.74
SPCS3-203ENST00000507678 FGAP02671 866 aa25.95■■□□□ 1.74
SPCS3-203ENST00000507678 PLA2G12BQ9BX93 195 aa25.94■■□□□ 1.74
SPCS3-203ENST00000507678 ZKSCAN5Q9Y2L8 839 aa25.94■■□□□ 1.74
SPCS3-203ENST00000507678 SNAP23O00161 211 aa25.94■■□□□ 1.74
SPCS3-203ENST00000507678 FOXP2O15409 715 aa25.94■■□□□ 1.74
SPCS3-203ENST00000507678 IDH1O75874 414 aaKnown RBP25.94■■□□□ 1.74
SPCS3-203ENST00000507678 RESTQ13127 1097 aa25.94■■□□□ 1.74
SPCS3-203ENST00000507678 PDIA4P13667 645 aaKnown RBP25.93■■□□□ 1.74
SPCS3-203ENST00000507678 BCL9O00512 1426 aa25.93■■□□□ 1.74
SPCS3-203ENST00000507678 IMMTQ16891 758 aaKnown RBP25.93■■□□□ 1.74
SPCS3-203ENST00000507678 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.93■■□□□ 1.74
SPCS3-203ENST00000507678 FUCA2Q9BTY2 467 aa25.93■■□□□ 1.74
SPCS3-203ENST00000507678 RIC1Q4ADV7 1423 aa25.92■■□□□ 1.74
SPCS3-203ENST00000507678 GPAA1O43292 621 aa25.92■■□□□ 1.74
SPCS3-203ENST00000507678 PDIA3P30101 505 aaKnown RBP25.92■■□□□ 1.74
SPCS3-203ENST00000507678 LRRFIP1Q32MZ4 808 aaKnown RBP25.92■■□□□ 1.74
SPCS3-203ENST00000507678 PGBD1Q96JS3 809 aa25.92■■□□□ 1.74
SPCS3-203ENST00000507678 UBN2Q6ZU65 1347 aa25.92■■□□□ 1.74
SPCS3-203ENST00000507678 LAMA4Q16363 1823 aa25.92■■□□□ 1.74
SPCS3-203ENST00000507678 SLC9C2Q5TAH2 1124 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 APPBP2Q92624 585 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 TNMDQ9H2S6 317 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 ITGB4P16144 1822 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 NR1I2O75469 434 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 APPP05067 770 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 MAP3K11Q16584 847 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 SMARCC2Q8TAQ2 1214 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 PDCL3Q9H2J4 239 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 FBXO3Q9UK99 471 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 ELP1O95163 1332 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 CCDC192P0DO97 292 aa25.91■■□□□ 1.74
SPCS3-203ENST00000507678 PHKA1P46020 1223 aa25.9■■□□□ 1.74
SPCS3-203ENST00000507678 ZFYP08048 801 aaPredicted RBP25.9■■□□□ 1.74
SPCS3-203ENST00000507678 UVSSAQ2YD98 709 aa25.89■■□□□ 1.74
SPCS3-203ENST00000507678 OTUD7BQ6GQQ9 843 aa25.89■■□□□ 1.74
SPCS3-203ENST00000507678 CTNNA3Q9UI47 895 aa25.89■■□□□ 1.74
SPCS3-203ENST00000507678 DENND2AQ9ULE3 1009 aa25.89■■□□□ 1.74
SPCS3-203ENST00000507678 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.89■■□□□ 1.74
SPCS3-203ENST00000507678 CDHR2Q9BYE9 1310 aa25.89■■□□□ 1.74
SPCS3-203ENST00000507678 NHSL1Q5SYE7 1610 aa25.88■■□□□ 1.73
SPCS3-203ENST00000507678 PRC1O43663 620 aa25.88■■□□□ 1.73
SPCS3-203ENST00000507678 PDE8AO60658 829 aa25.88■■□□□ 1.73
SPCS3-203ENST00000507678 LLPHQ9BRT6 129 aaKnown RBP25.88■■□□□ 1.73
SPCS3-203ENST00000507678 PIH1D3Q9NQM4 214 aaKnown RBP25.88■■□□□ 1.73
SPCS3-203ENST00000507678 ZNF213O14771 459 aa25.88■■□□□ 1.73
SPCS3-203ENST00000507678 KDM4AO75164 1064 aa25.88■■□□□ 1.73
SPCS3-203ENST00000507678 TPM2P07951 284 aa25.87■■□□□ 1.73
SPCS3-203ENST00000507678 RALYLQ86SE5 291 aaKnown RBP25.87■■□□□ 1.73
SPCS3-203ENST00000507678 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.87■■□□□ 1.73
SPCS3-203ENST00000507678 PDE8BO95263 885 aa25.87■■□□□ 1.73
SPCS3-203ENST00000507678 HMGN5P82970 282 aaKnown RBP25.87■■□□□ 1.73
SPCS3-203ENST00000507678 CCDC102BQ68D86 513 aa25.87■■□□□ 1.73
SPCS3-203ENST00000507678 AGXT2Q9BYV1 514 aa25.87■■□□□ 1.73
SPCS3-203ENST00000507678 ZSCAN16Q9H4T2 348 aaPredicted RBP25.87■■□□□ 1.73
SPCS3-203ENST00000507678 KLF18A0A0U1RQI7 1052 aa25.86■■□□□ 1.73
SPCS3-203ENST00000507678 AP5Z1O43299 807 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms