RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 GLIS2Q9BZE0 524 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-209ENST00000506632 C9orf78Q9NZ63 289 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-209ENST00000506632 ZNF804BA4D1E1 1349 aa11.49□□□□□ -0.57
PDLIM5-209ENST00000506632 USP17L3A6NCW0 530 aa11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 USP17L4A6NCW7 530 aa11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 CT47B1P0C2W7 299 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 NBPF7P0C2Y1 421 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 HSPA1AP0DMV8 641 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 HSPA1BP0DMV9 641 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 KLRK1P26718 216 aa11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 VEGFBP49765 207 aa11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 TBC1D10BQ4KMP7 808 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 C15orf52Q6ZUT6 534 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 CDC37L1Q7L3B6 337 aa11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 USP17L1Q7RTZ2 530 aa11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 COA1Q9GZY4 146 aa11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 THSD7BQ9C0I4 1608 aa11.48□□□□□ -0.57
PDLIM5-209ENST00000506632 BRPF1P55201 1214 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-209ENST00000506632 KIF4BQ2VIQ3 1234 aa11.47□□□□□ -0.57
PDLIM5-209ENST00000506632 DEFB115Q30KQ5 88 aa11.47□□□□□ -0.57
PDLIM5-209ENST00000506632 RABL6Q3YEC7 729 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-209ENST00000506632 DACT2Q5SW24 774 aa11.47□□□□□ -0.57
PDLIM5-209ENST00000506632 TLL2Q9Y6L7 1015 aa11.47□□□□□ -0.57
PDLIM5-209ENST00000506632 SNAP23O00161 211 aa11.46□□□□□ -0.57
PDLIM5-209ENST00000506632 CCDC57Q2TAC2 916 aa11.46□□□□□ -0.57
PDLIM5-209ENST00000506632 STRIP1Q5VSL9 837 aa11.46□□□□□ -0.57
PDLIM5-209ENST00000506632 ANKRD44Q8N8A2 993 aa11.46□□□□□ -0.57
PDLIM5-209ENST00000506632 ZNF594Q96JF6 807 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-209ENST00000506632 ABT1Q9ULW3 272 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-209ENST00000506632 CHMP3Q9Y3E7 222 aa11.46□□□□□ -0.57
PDLIM5-209ENST00000506632 POLR2AP24928 1970 aaKnown RBP11.46□□□□□ -0.58
PDLIM5-209ENST00000506632 TAF5LO75529 589 aa11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 CELF2O95319 508 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 SAMD1Q6SPF0 538 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 LDHAL6AQ6ZMR3 332 aa11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 SAPCD2Q86UD0 394 aa11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 USP48Q86UV5 1035 aa11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 HHIPL1Q96JK4 782 aa11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 USP44Q9H0E7 712 aa11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 SMC4Q9NTJ3 1288 aa11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 PCNTO95613 3336 aa11.45□□□□□ -0.58
PDLIM5-209ENST00000506632 ASTN2O75129 1339 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 MYO3BQ8WXR4 1341 aa11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 WDR33Q9C0J8 1336 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 KCNJ4P48050 445 aa11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 DLK2Q6UY11 383 aa11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 KRT26Q7Z3Y9 468 aa11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 DCPSQ96C86 337 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 MXD3Q9BW11 206 aa11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 CD209Q9NNX6 404 aa11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 MYOZ2Q9NPC6 264 aa11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 WBP1LQ9NX94 342 aa11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 GGA3Q9NZ52 723 aa11.44□□□□□ -0.58
PDLIM5-209ENST00000506632 PITPNM2Q9BZ72 1349 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 ADM5C9JUS6 153 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 IL1R1P14778 569 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 MMP14P50281 582 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 RARSP54136 660 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 SCARF1Q14162 830 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 TAF7LQ5H9L4 462 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 COL13A1Q5TAT6 717 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 IFFO2Q5TF58 517 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 TTLL5Q6EMB2 1281 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 MIER1Q8N108 512 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 CAPNS2Q96L46 248 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 PUS3Q9BZE2 481 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 CNNM1Q9NRU3 951 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 RIPOR2Q9Y4F9 1068 aa11.43□□□□□ -0.58
PDLIM5-209ENST00000506632 ECE1P42892 770 aa11.42□□□□□ -0.58
PDLIM5-209ENST00000506632 GTF2IP78347 998 aa11.42□□□□□ -0.58
PDLIM5-209ENST00000506632 UBE4AQ14139 1066 aa11.42□□□□□ -0.58
PDLIM5-209ENST00000506632 ANGEL2Q5VTE6 544 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-209ENST00000506632 DIEXFQ68CQ4 756 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-209ENST00000506632 CYP4F22Q6NT55 531 aa11.42□□□□□ -0.58
PDLIM5-209ENST00000506632 ZNF408Q9H9D4 720 aa11.42□□□□□ -0.58
PDLIM5-209ENST00000506632 NOB1Q9ULX3 412 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-209ENST00000506632 WNT10BO00744 389 aa11.41□□□□□ -0.58
PDLIM5-209ENST00000506632 FOXN1O15353 648 aa11.41□□□□□ -0.58
PDLIM5-209ENST00000506632 FKBP1AP62942 108 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-209ENST00000506632 ZNF804AQ7Z570 1209 aa11.41□□□□□ -0.58
PDLIM5-209ENST00000506632 SULF1Q8IWU6 871 aa11.41□□□□□ -0.58
PDLIM5-209ENST00000506632 CERS5Q8N5B7 392 aa11.41□□□□□ -0.58
PDLIM5-209ENST00000506632 VGLL2Q8N8G2 317 aa11.41□□□□□ -0.58
PDLIM5-209ENST00000506632 ZBED3Q96IU2 234 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-209ENST00000506632 API5Q9BZZ5 524 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-209ENST00000506632 MROH5Q6ZUA9 1318 aa11.4□□□□□ -0.58
PDLIM5-209ENST00000506632 PLIN1O60240 522 aa11.4□□□□□ -0.58
PDLIM5-209ENST00000506632 MAP2K2P36507 400 aa11.4□□□□□ -0.58
PDLIM5-209ENST00000506632 RFX5P48382 616 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-209ENST00000506632 NBPF9Q3BBW0 867 aa11.4□□□□□ -0.58
PDLIM5-209ENST00000506632 LRRC24Q50LG9 513 aa11.4□□□□□ -0.58
PDLIM5-209ENST00000506632 OGFOD1Q8N543 542 aa11.4□□□□□ -0.58
PDLIM5-209ENST00000506632 TDRD7Q8NHU6 1098 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-209ENST00000506632 ARHGAP45Q92619 1136 aa11.4□□□□□ -0.58
PDLIM5-209ENST00000506632 FBXW7Q969H0 707 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms