RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 DCPSQ96C86 337 aaKnown RBP12.06□□□□□ -0.48
PTPN20-216ENST00000506080 KCNQ5Q9NR82 932 aa12.06□□□□□ -0.48
PTPN20-216ENST00000506080 NSFL1CQ9UNZ2 370 aaKnown RBP12.06□□□□□ -0.48
PTPN20-216ENST00000506080 RIPK4P57078 832 aa12.05□□□□□ -0.48
PTPN20-216ENST00000506080 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
PTPN20-216ENST00000506080 TMC4Q7Z404 712 aa12.05□□□□□ -0.48
PTPN20-216ENST00000506080 CELF1Q92879 486 aaKnown RBP12.05□□□□□ -0.48
PTPN20-216ENST00000506080 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
PTPN20-216ENST00000506080 RNF186Q9NXI6 227 aa12.05□□□□□ -0.48
PTPN20-216ENST00000506080 SAGE1Q9NXZ1 904 aa12.05□□□□□ -0.48
PTPN20-216ENST00000506080 ECE2O60344 883 aa12.04□□□□□ -0.48
PTPN20-216ENST00000506080 GPSM2P81274 684 aa12.04□□□□□ -0.48
PTPN20-216ENST00000506080 KRT24Q2M2I5 525 aa12.04□□□□□ -0.48
PTPN20-216ENST00000506080 CCDC102AQ96A19 550 aa12.04□□□□□ -0.48
PTPN20-216ENST00000506080 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
PTPN20-216ENST00000506080 POLLQ9UGP5 575 aa12.04□□□□□ -0.48
PTPN20-216ENST00000506080 RTL9Q8NET4 1388 aa12.04□□□□□ -0.48
PTPN20-216ENST00000506080 POLR2AP24928 1970 aaKnown RBP12.04□□□□□ -0.48
PTPN20-216ENST00000506080 TNRC18O15417 2968 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-216ENST00000506080 SLC10A3P09131 477 aa12.03□□□□□ -0.48
PTPN20-216ENST00000506080 KIF4BQ2VIQ3 1234 aa12.03□□□□□ -0.48
PTPN20-216ENST00000506080 RTL5Q5HYW3 569 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-216ENST00000506080 FAM89AQ96GI7 184 aa12.03□□□□□ -0.48
PTPN20-216ENST00000506080 GGA3Q9NZ52 723 aa12.03□□□□□ -0.48
PTPN20-216ENST00000506080 LRRC37AA6NMS7 1700 aa12.03□□□□□ -0.48
PTPN20-216ENST00000506080 ASTN2O75129 1339 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-216ENST00000506080 RPS12P25398 132 aaKnown RBP12.03□□□□□ -0.48
PTPN20-216ENST00000506080 EMP3P54852 163 aa12.03□□□□□ -0.48
PTPN20-216ENST00000506080 CSRNP1Q96S65 589 aa12.03□□□□□ -0.48
PTPN20-216ENST00000506080 EYA3Q99504 573 aa12.03□□□□□ -0.48
PTPN20-216ENST00000506080 COL4A1P02462 1669 aa12.02□□□□□ -0.49
PTPN20-216ENST00000506080 ATP5J2-PTCD1G3V325 749 aa12.02□□□□□ -0.49
PTPN20-216ENST00000506080 SF3B3Q15393 1217 aaKnown RBP12.02□□□□□ -0.49
PTPN20-216ENST00000506080 SULF1Q8IWU6 871 aa12.02□□□□□ -0.49
PTPN20-216ENST00000506080 DDX60Q8IY21 1712 aaKnown RBP12.02□□□□□ -0.49
PTPN20-216ENST00000506080 CDCA5Q96FF9 252 aa12.02□□□□□ -0.49
PTPN20-216ENST00000506080 BABAM1Q9NWV8 329 aa12.02□□□□□ -0.49
PTPN20-216ENST00000506080 CHPF2Q9P2E5 772 aa12.02□□□□□ -0.49
PTPN20-216ENST00000506080 TMPOP42166 694 aaKnown RBP12.01□□□□□ -0.49
PTPN20-216ENST00000506080 CTU1Q7Z7A3 348 aaKnown RBP12.01□□□□□ -0.49
PTPN20-216ENST00000506080 TBC1D16Q8TBP0 767 aa12.01□□□□□ -0.49
PTPN20-216ENST00000506080 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
PTPN20-216ENST00000506080 VIL1P09327 827 aaKnown RBP12□□□□□ -0.49
PTPN20-216ENST00000506080 NEUROD2Q15784 382 aa12□□□□□ -0.49
PTPN20-216ENST00000506080 ANKRD13DQ6ZTN6 518 aa12□□□□□ -0.49
PTPN20-216ENST00000506080 RASAL3Q86YV0 1011 aa12□□□□□ -0.49
PTPN20-216ENST00000506080 PLBD2Q8NHP8 589 aa12□□□□□ -0.49
PTPN20-216ENST00000506080 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
PTPN20-216ENST00000506080 ZC3H12CQ9C0D7 883 aaKnown RBP12□□□□□ -0.49
PTPN20-216ENST00000506080 AKAP11Q9UKA4 1901 aa11.99□□□□□ -0.49
PTPN20-216ENST00000506080 POTEB3A0JP26 581 aa11.99□□□□□ -0.49
PTPN20-216ENST00000506080 IRS4O14654 1257 aaPredicted RBP11.99□□□□□ -0.49
PTPN20-216ENST00000506080 UFL1O94874 794 aa11.99□□□□□ -0.49
PTPN20-216ENST00000506080 RPS8P62241 208 aaKnown RBP11.99□□□□□ -0.49
PTPN20-216ENST00000506080 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
PTPN20-216ENST00000506080 SCARF1Q14162 830 aa11.99□□□□□ -0.49
PTPN20-216ENST00000506080 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
PTPN20-216ENST00000506080 ANGEL2Q5VTE6 544 aaKnown RBP11.99□□□□□ -0.49
PTPN20-216ENST00000506080 POTEBQ6S5H4 581 aa11.99□□□□□ -0.49
PTPN20-216ENST00000506080 SCAF8Q9UPN6 1271 aaKnown RBP11.99□□□□□ -0.49
PTPN20-216ENST00000506080 PDE4DIPQ5VU43 2346 aa11.99□□□□□ -0.49
PTPN20-216ENST00000506080 MOB2Q70IA6 237 aa11.98□□□□□ -0.49
PTPN20-216ENST00000506080 SEC31BQ9NQW1 1179 aa11.98□□□□□ -0.49
PTPN20-216ENST00000506080 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
PTPN20-216ENST00000506080 SCN9AQ15858 1988 aa11.98□□□□□ -0.49
PTPN20-216ENST00000506080 CHL1O00533 1208 aa11.97□□□□□ -0.49
PTPN20-216ENST00000506080 PRPF38BQ5VTL8 546 aaKnown RBP11.97□□□□□ -0.49
PTPN20-216ENST00000506080 CCDC146Q8IYE0 955 aa11.97□□□□□ -0.49
PTPN20-216ENST00000506080 ANKIB1Q9P2G1 1089 aa11.97□□□□□ -0.49
PTPN20-216ENST00000506080 HDAC9Q9UKV0 1011 aa11.97□□□□□ -0.49
PTPN20-216ENST00000506080 FAM205CA6NFA0 338 aa11.96□□□□□ -0.49
PTPN20-216ENST00000506080 TBC1D8O95759 1140 aa11.96□□□□□ -0.49
PTPN20-216ENST00000506080 ZNF280AP59817 542 aaPredicted RBP11.96□□□□□ -0.49
PTPN20-216ENST00000506080 RSBN1LQ6PCB5 846 aaPredicted RBP11.96□□□□□ -0.49
PTPN20-216ENST00000506080 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.49
PTPN20-216ENST00000506080 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
PTPN20-216ENST00000506080 DBF4Q9UBU7 674 aaPredicted RBP11.96□□□□□ -0.49
PTPN20-216ENST00000506080 GGA1Q9UJY5 639 aa11.96□□□□□ -0.49
PTPN20-216ENST00000506080 UBE2Q2LH0YL09 131 aa11.95□□□□□ -0.5
PTPN20-216ENST00000506080 PRAMEF18Q5VWM3 479 aa11.95□□□□□ -0.5
PTPN20-216ENST00000506080 AGBL3Q8NEM8 1001 aa11.95□□□□□ -0.5
PTPN20-216ENST00000506080 ZNF296Q8WUU4 475 aaPredicted RBP11.95□□□□□ -0.5
PTPN20-216ENST00000506080 CCDC85AQ96PX6 553 aaPredicted RBP11.95□□□□□ -0.5
PTPN20-216ENST00000506080 MYOZ2Q9NPC6 264 aa11.95□□□□□ -0.5
PTPN20-216ENST00000506080 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
PTPN20-216ENST00000506080 FKBP1BP68106 108 aa11.94□□□□□ -0.5
PTPN20-216ENST00000506080 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
PTPN20-216ENST00000506080 JARID2Q92833 1246 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-216ENST00000506080 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
PTPN20-216ENST00000506080 GMLQ99445 158 aa11.94□□□□□ -0.5
PTPN20-216ENST00000506080 HYPKQ9NX55 129 aa11.94□□□□□ -0.5
PTPN20-216ENST00000506080 PAPPA2Q9BXP8 1791 aa11.94□□□□□ -0.5
PTPN20-216ENST00000506080 TRIM28Q13263 835 aaKnown RBP11.94□□□□□ -0.5
PTPN20-216ENST00000506080 TTLL12Q14166 644 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-216ENST00000506080 PKN2Q16513 984 aaKnown RBP11.94□□□□□ -0.5
PTPN20-216ENST00000506080 DUSP27Q5VZP5 1158 aa11.94□□□□□ -0.5
PTPN20-216ENST00000506080 ZBTB38Q8NAP3 1195 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-216ENST00000506080 PITPNM2Q9BZ72 1349 aa11.93□□□□□ -0.5
PTPN20-216ENST00000506080 HOXB7P09629 217 aa11.93□□□□□ -0.5
PTPN20-216ENST00000506080 CCDC152Q4G0S7 254 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms