RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 TNPO1Q92973 898 aaKnown RBP29.61■■■□□ 2.33
DHFR-203ENST00000505337 NARFQ9UHQ1 456 aa29.61■■■□□ 2.33
DHFR-203ENST00000505337 RPAP1Q9BWH6 1393 aaPredicted RBP29.61■■■□□ 2.33
DHFR-203ENST00000505337 GOLIM4O00461 696 aa29.6■■■□□ 2.33
DHFR-203ENST00000505337 TM6SF1Q9BZW5 370 aa29.6■■■□□ 2.33
DHFR-203ENST00000505337 GOLGB1Q14789 3259 aaKnown RBP29.6■■■□□ 2.33
DHFR-203ENST00000505337 DOCK2Q92608 1830 aa29.6■■■□□ 2.33
DHFR-203ENST00000505337 ZPR1O75312 459 aa29.59■■■□□ 2.33
DHFR-203ENST00000505337 HCLS1P14317 486 aaPredicted RBP29.59■■■□□ 2.33
DHFR-203ENST00000505337 ATP2B3Q16720 1220 aa29.59■■■□□ 2.33
DHFR-203ENST00000505337 CREB3L3Q68CJ9 461 aa29.59■■■□□ 2.33
DHFR-203ENST00000505337 CNNM1Q9NRU3 951 aa29.59■■■□□ 2.33
DHFR-203ENST00000505337 COL4A1P02462 1669 aa29.59■■■□□ 2.33
DHFR-203ENST00000505337 TAF5LO75529 589 aa29.59■■■□□ 2.33
DHFR-203ENST00000505337 CCDC158Q5M9N0 1113 aa29.59■■■□□ 2.33
DHFR-203ENST00000505337 ZGPATQ8N5A5 531 aaKnown RBP29.59■■■□□ 2.33
DHFR-203ENST00000505337 CD2APQ9Y5K6 639 aa29.59■■■□□ 2.33
DHFR-203ENST00000505337 BCL2L12Q9HB09 334 aa29.58■■■□□ 2.33
DHFR-203ENST00000505337 TAF1P21675 1872 aa29.57■■■□□ 2.32
DHFR-203ENST00000505337 CHGBP05060 677 aa29.57■■■□□ 2.32
DHFR-203ENST00000505337 HSP90B1P14625 803 aaKnown RBP29.57■■■□□ 2.32
DHFR-203ENST00000505337 SLC27A2O14975 620 aa29.57■■■□□ 2.32
DHFR-203ENST00000505337 CYP2E1P05181 493 aaPredicted RBP29.57■■■□□ 2.32
DHFR-203ENST00000505337 TTC39AQ5SRH9 613 aa29.57■■■□□ 2.32
DHFR-203ENST00000505337 FAM177BA6PVY3 158 aa29.56■■■□□ 2.32
DHFR-203ENST00000505337 ADCK5Q3MIX3 580 aa29.56■■■□□ 2.32
DHFR-203ENST00000505337 MCMDC2Q4G0Z9 681 aa29.56■■■□□ 2.32
DHFR-203ENST00000505337 INTS4Q96HW7 963 aaKnown RBP29.56■■■□□ 2.32
DHFR-203ENST00000505337 MROH5Q6ZUA9 1318 aa29.55■■■□□ 2.32
DHFR-203ENST00000505337 PDE8BO95263 885 aa29.55■■■□□ 2.32
DHFR-203ENST00000505337 ZKSCAN1P17029 563 aaPredicted RBP29.55■■■□□ 2.32
DHFR-203ENST00000505337 CASTP20810 708 aaKnown RBP29.55■■■□□ 2.32
DHFR-203ENST00000505337 ZSWIM6Q9HCJ5 1215 aa29.55■■■□□ 2.32
DHFR-203ENST00000505337 TM4SF1P30408 202 aa29.54■■■□□ 2.32
DHFR-203ENST00000505337 KCNJ4P48050 445 aa29.54■■■□□ 2.32
DHFR-203ENST00000505337 DDR1Q08345 913 aa29.54■■■□□ 2.32
DHFR-203ENST00000505337 GORABQ5T7V8 394 aa29.54■■■□□ 2.32
DHFR-203ENST00000505337 HELLSQ9NRZ9 838 aa29.54■■■□□ 2.32
DHFR-203ENST00000505337 HMG20BQ9P0W2 317 aa29.54■■■□□ 2.32
DHFR-203ENST00000505337 NUCB2P80303 420 aa29.54■■■□□ 2.32
DHFR-203ENST00000505337 CCDC152Q4G0S7 254 aa29.54■■■□□ 2.32
DHFR-203ENST00000505337 ZMYM1Q5SVZ6 1142 aa29.54■■■□□ 2.32
DHFR-203ENST00000505337 CLEC17AQ6ZS10 378 aa29.54■■■□□ 2.32
DHFR-203ENST00000505337 ZNF512BQ96KM6 892 aaPredicted RBP29.54■■■□□ 2.32
DHFR-203ENST00000505337 JAKMIP1Q96N16 626 aaKnown RBP29.54■■■□□ 2.32
DHFR-203ENST00000505337 SEC62Q99442 399 aaKnown RBP29.54■■■□□ 2.32
DHFR-203ENST00000505337 DEKP35659 375 aaKnown RBP29.53■■■□□ 2.32
DHFR-203ENST00000505337 AK2P54819 239 aa29.53■■■□□ 2.32
DHFR-203ENST00000505337 RNF20Q5VTR2 975 aa29.53■■■□□ 2.32
DHFR-203ENST00000505337 PARP3Q9Y6F1 533 aa29.53■■■□□ 2.32
DHFR-203ENST00000505337 SCARF1Q14162 830 aa29.52■■■□□ 2.32
DHFR-203ENST00000505337 TSGA10IPQ3SY00 556 aa29.52■■■□□ 2.32
DHFR-203ENST00000505337 CCDC129Q6ZRS4 1044 aa29.52■■■□□ 2.32
DHFR-203ENST00000505337 NOL8Q76FK4 1167 aaKnown RBP29.52■■■□□ 2.32
DHFR-203ENST00000505337 DDX11L8A8MPP1 907 aa29.51■■■□□ 2.32
DHFR-203ENST00000505337 FGFR2P21802 821 aa29.51■■■□□ 2.32
DHFR-203ENST00000505337 VPS53Q5VIR6 699 aa29.51■■■□□ 2.32
DHFR-203ENST00000505337 GBP4Q96PP9 640 aa29.51■■■□□ 2.32
DHFR-203ENST00000505337 DCAF8L1A6NGE4 600 aa29.5■■■□□ 2.31
DHFR-203ENST00000505337 POLRMTO00411 1230 aaKnown RBP29.5■■■□□ 2.31
DHFR-203ENST00000505337 NFIXQ14938 502 aa29.5■■■□□ 2.31
DHFR-203ENST00000505337 PUM3Q15397 648 aaKnown RBP29.5■■■□□ 2.31
DHFR-203ENST00000505337 RUFY3Q7L099 469 aa29.5■■■□□ 2.31
DHFR-203ENST00000505337 SEC31BQ9NQW1 1179 aa29.5■■■□□ 2.31
DHFR-203ENST00000505337 CYP46A1Q9Y6A2 500 aa29.5■■■□□ 2.31
DHFR-203ENST00000505337 RNF113AO15541 343 aaKnown RBP29.49■■■□□ 2.31
DHFR-203ENST00000505337 CPA1P15085 419 aa29.49■■■□□ 2.31
DHFR-203ENST00000505337 U3KPZ7 1027 aaPredicted RBP29.49■■■□□ 2.31
DHFR-203ENST00000505337 MAST3O60307 1309 aa29.49■■■□□ 2.31
DHFR-203ENST00000505337 FKBP4Q02790 459 aaKnown RBP eCLIP29.48■■■□□ 2.31
DHFR-203ENST00000505337 C10orf71Q711Q0 1435 aa29.48■■■□□ 2.31
DHFR-203ENST00000505337 KIF13BQ9NQT8 1826 aa29.48■■■□□ 2.31
DHFR-203ENST00000505337 MCAMP43121 646 aa29.48■■■□□ 2.31
DHFR-203ENST00000505337 PKP1Q13835 747 aa29.48■■■□□ 2.31
DHFR-203ENST00000505337 PSMA5P28066 241 aa29.47■■■□□ 2.31
DHFR-203ENST00000505337 ARID4AP29374 1257 aaPredicted RBP29.47■■■□□ 2.31
DHFR-203ENST00000505337 ZAP70P43403 619 aa29.47■■■□□ 2.31
DHFR-203ENST00000505337 SLFNL1Q499Z3 407 aa29.47■■■□□ 2.31
DHFR-203ENST00000505337 TBC1D9BQ66K14 1250 aa29.47■■■□□ 2.31
DHFR-203ENST00000505337 LPIN2Q92539 896 aa29.47■■■□□ 2.31
DHFR-203ENST00000505337 LIMCH1Q9UPQ0 1083 aa29.47■■■□□ 2.31
DHFR-203ENST00000505337 TAF6LQ9Y6J9 622 aa29.47■■■□□ 2.31
DHFR-203ENST00000505337 LRRFIP1Q32MZ4 808 aaKnown RBP29.46■■■□□ 2.31
DHFR-203ENST00000505337 ERFEQ4G0M1 354 aa29.46■■■□□ 2.31
DHFR-203ENST00000505337 MPHOSPH8Q99549 860 aa29.46■■■□□ 2.31
DHFR-203ENST00000505337 DSCC1Q9BVC3 393 aa29.46■■■□□ 2.31
DHFR-203ENST00000505337 PDRG1Q9NUG6 133 aa29.46■■■□□ 2.31
DHFR-203ENST00000505337 TNRC6CQ9HCJ0 1690 aaKnown RBP29.46■■■□□ 2.31
DHFR-203ENST00000505337 ZFYP08048 801 aaPredicted RBP29.45■■■□□ 2.31
DHFR-203ENST00000505337 GSE1Q14687 1217 aa29.45■■■□□ 2.3
DHFR-203ENST00000505337 PI16Q6UXB8 463 aa29.45■■■□□ 2.3
DHFR-203ENST00000505337 SF3B3Q15393 1217 aaKnown RBP29.44■■■□□ 2.3
DHFR-203ENST00000505337 GPR162Q16538 588 aa29.44■■■□□ 2.3
DHFR-203ENST00000505337 ZDHHC9Q9Y397 364 aa29.44■■■□□ 2.3
DHFR-203ENST00000505337 IGHMBP2P38935 993 aaKnown RBP29.43■■■□□ 2.3
DHFR-203ENST00000505337 KRT32Q14532 448 aa29.43■■■□□ 2.3
DHFR-203ENST00000505337 CCDC102BQ68D86 513 aa29.43■■■□□ 2.3
DHFR-203ENST00000505337 KIAA1551Q9HCM1 1747 aa29.43■■■□□ 2.3
DHFR-203ENST00000505337 PHKA1P46020 1223 aa29.42■■■□□ 2.3
DHFR-203ENST00000505337 BICDL1Q6ZP65 573 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms