RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 SEC31BQ9NQW1 1179 aa20.65■□□□□ 0.9
PDLIM7-213ENST00000505074 FXR1P51114 621 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDLIM7-213ENST00000505074 OGFOD1Q8N543 542 aa20.64■□□□□ 0.89
PDLIM7-213ENST00000505074 XDHP47989 1333 aa20.63■□□□□ 0.89
PDLIM7-213ENST00000505074 ZNF853P0CG23 659 aa20.63■□□□□ 0.89
PDLIM7-213ENST00000505074 PTPN12Q05209 780 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-213ENST00000505074 TRIM28Q13263 835 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-213ENST00000505074 OTOP1Q7RTM1 612 aa20.63■□□□□ 0.89
PDLIM7-213ENST00000505074 ATP2B4P23634 1241 aa20.62■□□□□ 0.89
PDLIM7-213ENST00000505074 INHBEP58166 350 aa20.62■□□□□ 0.89
PDLIM7-213ENST00000505074 PRKG1Q13976 671 aa20.62■□□□□ 0.89
PDLIM7-213ENST00000505074 SPRYD7Q5W111 196 aa20.62■□□□□ 0.89
PDLIM7-213ENST00000505074 PHAXQ9H814 394 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-213ENST00000505074 MANSC4A6NHS7 340 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-213ENST00000505074 WNT10BO00744 389 aa20.61■□□□□ 0.89
PDLIM7-213ENST00000505074 CCDC152Q4G0S7 254 aa20.61■□□□□ 0.89
PDLIM7-213ENST00000505074 ZBTB38Q8NAP3 1195 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-213ENST00000505074 MYD88Q99836 296 aa20.61■□□□□ 0.89
PDLIM7-213ENST00000505074 ZNF646O15015 1829 aaPredicted RBP20.6■□□□□ 0.89
PDLIM7-213ENST00000505074 KIAA0100Q14667 2235 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-213ENST00000505074 LAMB1P07942 1786 aa20.59■□□□□ 0.89
PDLIM7-213ENST00000505074 MYO3BQ8WXR4 1341 aa20.59■□□□□ 0.89
PDLIM7-213ENST00000505074 LDLRAD1Q5T700 205 aa20.59■□□□□ 0.89
PDLIM7-213ENST00000505074 IFNL1Q8IU54 200 aa20.59■□□□□ 0.89
PDLIM7-213ENST00000505074 APOBEC3FQ8IUX4 373 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-213ENST00000505074 ANKRD18AQ8IVF6 992 aa20.59■□□□□ 0.89
PDLIM7-213ENST00000505074 C8orf58Q8NAV2 365 aa20.59■□□□□ 0.89
PDLIM7-213ENST00000505074 ERO1AQ96HE7 468 aa20.59■□□□□ 0.89
PDLIM7-213ENST00000505074 ANGEL1Q9UNK9 670 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-213ENST00000505074 DDX58O95786 925 aaKnown RBP20.58■□□□□ 0.89
PDLIM7-213ENST00000505074 MMP14P50281 582 aa20.58■□□□□ 0.89
PDLIM7-213ENST00000505074 DACT2Q5SW24 774 aa20.58■□□□□ 0.89
PDLIM7-213ENST00000505074 CCDC30Q5VVM6 783 aa20.58■□□□□ 0.89
PDLIM7-213ENST00000505074 FBXW7Q969H0 707 aa20.58■□□□□ 0.89
PDLIM7-213ENST00000505074 CHMP4AQ9BY43 222 aa20.58■□□□□ 0.89
PDLIM7-213ENST00000505074 PTPN22Q9Y2R2 807 aa20.58■□□□□ 0.89
PDLIM7-213ENST00000505074 PDE8AO60658 829 aa20.57■□□□□ 0.88
PDLIM7-213ENST00000505074 EN2P19622 333 aaPredicted RBP20.57■□□□□ 0.88
PDLIM7-213ENST00000505074 CCDC184Q52MB2 194 aa20.57■□□□□ 0.88
PDLIM7-213ENST00000505074 TSR2Q969E8 191 aaKnown RBP20.57■□□□□ 0.88
PDLIM7-213ENST00000505074 SLC10A4Q96EP9 437 aa20.57■□□□□ 0.88
PDLIM7-213ENST00000505074 SPEF2Q9C093 1822 aa20.56■□□□□ 0.88
PDLIM7-213ENST00000505074 SASH1O94885 1247 aa20.56■□□□□ 0.88
PDLIM7-213ENST00000505074 ARMC5Q96C12 935 aa20.56■□□□□ 0.88
PDLIM7-213ENST00000505074 CCDC85AQ96PX6 553 aaPredicted RBP20.56■□□□□ 0.88
PDLIM7-213ENST00000505074 MXD3Q9BW11 206 aa20.56■□□□□ 0.88
PDLIM7-213ENST00000505074 MED23Q9ULK4 1368 aa20.56■□□□□ 0.88
PDLIM7-213ENST00000505074 MKI67P46013 3256 aaKnown RBP20.55■□□□□ 0.88
PDLIM7-213ENST00000505074 ZBTB48P10074 688 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-213ENST00000505074 STRIP1Q5VSL9 837 aa20.55■□□□□ 0.88
PDLIM7-213ENST00000505074 CWC25Q9NXE8 425 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-213ENST00000505074 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-213ENST00000505074 COLQQ9Y215 455 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-213ENST00000505074 PCCAP05165 728 aaPredicted RBP20.54■□□□□ 0.88
PDLIM7-213ENST00000505074 ZEB1P37275 1124 aaPredicted RBP20.54■□□□□ 0.88
PDLIM7-213ENST00000505074 OTUD7BQ6GQQ9 843 aa20.54■□□□□ 0.88
PDLIM7-213ENST00000505074 TSPYL6Q8N831 410 aa20.54■□□□□ 0.88
PDLIM7-213ENST00000505074 CD99L2Q8TCZ2 262 aa20.54■□□□□ 0.88
PDLIM7-213ENST00000505074 JARID2Q92833 1246 aaPredicted RBP20.54■□□□□ 0.88
PDLIM7-213ENST00000505074 TMEM106CQ9BVX2 250 aa20.54■□□□□ 0.88
PDLIM7-213ENST00000505074 STK31Q9BXU1 1019 aa20.54■□□□□ 0.88
PDLIM7-213ENST00000505074 EFCC1Q9HA90 598 aa20.54■□□□□ 0.88
PDLIM7-213ENST00000505074 COL1A1P02452 1464 aaPredicted RBP20.54■□□□□ 0.88
PDLIM7-213ENST00000505074 IGF2BP3O00425 579 aaKnown RBP eCLIP20.53■□□□□ 0.88
PDLIM7-213ENST00000505074 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
PDLIM7-213ENST00000505074 CDC5LQ99459 802 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-213ENST00000505074 MRS2Q9HD23 443 aa20.53■□□□□ 0.88
PDLIM7-213ENST00000505074 ANP32CO43423 234 aa20.52■□□□□ 0.88
PDLIM7-213ENST00000505074 WNK4Q96J92 1243 aa20.52■□□□□ 0.88
PDLIM7-213ENST00000505074 METTL22Q9BUU2 404 aaPredicted RBP20.52■□□□□ 0.88
PDLIM7-213ENST00000505074 COA1Q9GZY4 146 aa20.52■□□□□ 0.88
PDLIM7-213ENST00000505074 FZD1Q9UP38 647 aa20.52■□□□□ 0.88
PDLIM7-213ENST00000505074 MAP3K2Q9Y2U5 619 aa20.52■□□□□ 0.88
PDLIM7-213ENST00000505074 MYH3P11055 1940 aa20.52■□□□□ 0.88
PDLIM7-213ENST00000505074 ECM29Q5VYK3 1845 aa20.52■□□□□ 0.88
PDLIM7-213ENST00000505074 HTTP42858 3142 aa20.52■□□□□ 0.88
PDLIM7-213ENST00000505074 WTIPA6NIX2 430 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-213ENST00000505074 PPP1R12BO60237 982 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-213ENST00000505074 MAP3K11Q16584 847 aa20.51■□□□□ 0.87
PDLIM7-213ENST00000505074 UNCXA6NJT0 531 aa20.5■□□□□ 0.87
PDLIM7-213ENST00000505074 CCT4P50991 539 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-213ENST00000505074 SP3Q02447 781 aa20.5■□□□□ 0.87
PDLIM7-213ENST00000505074 NEXNQ0ZGT2 675 aa20.5■□□□□ 0.87
PDLIM7-213ENST00000505074 CRHR2Q13324 411 aa20.5■□□□□ 0.87
PDLIM7-213ENST00000505074 TTLL5Q6EMB2 1281 aa20.5■□□□□ 0.87
PDLIM7-213ENST00000505074 KIAA0825Q8IV33 1275 aa20.5■□□□□ 0.87
PDLIM7-213ENST00000505074 WWC1Q8IX03 1113 aa20.5■□□□□ 0.87
PDLIM7-213ENST00000505074 DEFB129Q9H1M3 183 aa20.5■□□□□ 0.87
PDLIM7-213ENST00000505074 MINPP1Q9UNW1 487 aa20.5■□□□□ 0.87
PDLIM7-213ENST00000505074 SALL2Q9Y467 1007 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-213ENST00000505074 TWISTNBQ3B726 338 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-213ENST00000505074 CLMNQ96JQ2 1002 aa20.49■□□□□ 0.87
PDLIM7-213ENST00000505074 BSDC1Q9NW68 430 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-213ENST00000505074 PI4KAP2A4QPH2 592 aa20.48■□□□□ 0.87
PDLIM7-213ENST00000505074 CCDC27Q2M243 656 aa20.48■□□□□ 0.87
PDLIM7-213ENST00000505074 KSR2Q6VAB6 950 aa20.48■□□□□ 0.87
PDLIM7-213ENST00000505074 NBPF11Q86T75 865 aa20.48■□□□□ 0.87
PDLIM7-213ENST00000505074 PI4KAP1Q8N8J0 262 aa20.48■□□□□ 0.87
PDLIM7-213ENST00000505074 ZBED3Q96IU2 234 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-213ENST00000505074 PPP2R3BQ9Y5P8 575 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms