RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 KLRK1P26718 216 aa31.97■■■□□ 2.71
PVT1-201ENST00000504719 KCNJ4P48050 445 aa31.97■■■□□ 2.71
PVT1-201ENST00000504719 RBM26Q5T8P6 1007 aaKnown RBP31.97■■■□□ 2.71
PVT1-201ENST00000504719 CST9Q5W186 159 aa31.97■■■□□ 2.71
PVT1-201ENST00000504719 CDC37L1Q7L3B6 337 aa31.97■■■□□ 2.71
PVT1-201ENST00000504719 GMLQ99445 158 aa31.97■■■□□ 2.71
PVT1-201ENST00000504719 TAF5LO75529 589 aa31.96■■■□□ 2.71
PVT1-201ENST00000504719 TAF7LQ5H9L4 462 aa31.96■■■□□ 2.71
PVT1-201ENST00000504719 HELBQ8NG08 1087 aaPredicted RBP31.96■■■□□ 2.71
PVT1-201ENST00000504719 ZBED9Q6R2W3 1325 aa31.96■■■□□ 2.71
PVT1-201ENST00000504719 PCNTO95613 3336 aa31.95■■■□□ 2.71
PVT1-201ENST00000504719 ZNF280AP59817 542 aaPredicted RBP31.95■■■□□ 2.71
PVT1-201ENST00000504719 KIF4BQ2VIQ3 1234 aa31.95■■■□□ 2.71
PVT1-201ENST00000504719 DEFB115Q30KQ5 88 aa31.95■■■□□ 2.71
PVT1-201ENST00000504719 LDHAL6AQ6ZMR3 332 aa31.95■■■□□ 2.71
PVT1-201ENST00000504719 ABT1Q9ULW3 272 aaKnown RBP31.95■■■□□ 2.71
PVT1-201ENST00000504719 SNAP23O00161 211 aa31.94■■■□□ 2.7
PVT1-201ENST00000504719 VEGFBP49765 207 aa31.94■■■□□ 2.7
PVT1-201ENST00000504719 BRPF1P55201 1214 aaPredicted RBP31.94■■■□□ 2.7
PVT1-201ENST00000504719 BICC1Q9H694 974 aaKnown RBP31.94■■■□□ 2.7
PVT1-201ENST00000504719 IRS2Q9Y4H2 1338 aa31.94■■■□□ 2.7
PVT1-201ENST00000504719 RABL6Q3YEC7 729 aaPredicted RBP31.93■■■□□ 2.7
PVT1-201ENST00000504719 DACT2Q5SW24 774 aa31.93■■■□□ 2.7
PVT1-201ENST00000504719 C15orf52Q6ZUT6 534 aaKnown RBP31.93■■■□□ 2.7
PVT1-201ENST00000504719 USP44Q9H0E7 712 aa31.93■■■□□ 2.7
PVT1-201ENST00000504719 CNNM1Q9NRU3 951 aa31.93■■■□□ 2.7
PVT1-201ENST00000504719 STRIP1Q5VSL9 837 aa31.92■■■□□ 2.7
PVT1-201ENST00000504719 CELF2O95319 508 aaKnown RBP31.91■■■□□ 2.7
PVT1-201ENST00000504719 USP17L8P0C7I0 530 aa31.91■■■□□ 2.7
PVT1-201ENST00000504719 HSPA1AP0DMV8 641 aaKnown RBP31.91■■■□□ 2.7
PVT1-201ENST00000504719 HSPA1BP0DMV9 641 aaKnown RBP31.91■■■□□ 2.7
PVT1-201ENST00000504719 USP48Q86UV5 1035 aa31.91■■■□□ 2.7
PVT1-201ENST00000504719 ANKRD44Q8N8A2 993 aa31.91■■■□□ 2.7
PVT1-201ENST00000504719 NOB1Q9ULX3 412 aaKnown RBP31.91■■■□□ 2.7
PVT1-201ENST00000504719 FBXW7Q969H0 707 aa31.9■■■□□ 2.7
PVT1-201ENST00000504719 MXD3Q9BW11 206 aa31.9■■■□□ 2.7
PVT1-201ENST00000504719 TLL2Q9Y6L7 1015 aa31.9■■■□□ 2.7
PVT1-201ENST00000504719 RARSP54136 660 aaKnown RBP31.89■■■□□ 2.7
PVT1-201ENST00000504719 CD209Q9NNX6 404 aa31.89■■■□□ 2.7
PVT1-201ENST00000504719 PLIN1O60240 522 aa31.88■■■□□ 2.69
PVT1-201ENST00000504719 TTLL5Q6EMB2 1281 aa31.88■■■□□ 2.69
PVT1-201ENST00000504719 DCPSQ96C86 337 aaKnown RBP31.88■■■□□ 2.69
PVT1-201ENST00000504719 PUS3Q9BZE2 481 aaKnown RBP31.88■■■□□ 2.69
PVT1-201ENST00000504719 MYOZ2Q9NPC6 264 aa31.88■■■□□ 2.69
PVT1-201ENST00000504719 MYO3BQ8WXR4 1341 aa31.88■■■□□ 2.69
PVT1-201ENST00000504719 KRT26Q7Z3Y9 468 aa31.87■■■□□ 2.69
PVT1-201ENST00000504719 WDR33Q9C0J8 1336 aaKnown RBP31.86■■■□□ 2.69
PVT1-201ENST00000504719 DLK2Q6UY11 383 aa31.86■■■□□ 2.69
PVT1-201ENST00000504719 API5Q9BZZ5 524 aaKnown RBP31.86■■■□□ 2.69
PVT1-201ENST00000504719 ASTN2O75129 1339 aaPredicted RBP31.85■■■□□ 2.69
PVT1-201ENST00000504719 GTF2IP78347 998 aa31.85■■■□□ 2.69
PVT1-201ENST00000504719 SCARF1Q14162 830 aa31.85■■■□□ 2.69
PVT1-201ENST00000504719 ZNF408Q9H9D4 720 aa31.85■■■□□ 2.69
PVT1-201ENST00000504719 GGA3Q9NZ52 723 aa31.85■■■□□ 2.69
PVT1-201ENST00000504719 RIPOR2Q9Y4F9 1068 aa31.85■■■□□ 2.69
PVT1-201ENST00000504719 ADM5C9JUS6 153 aa31.83■■■□□ 2.69
PVT1-201ENST00000504719 UBE4AQ14139 1066 aa31.83■■■□□ 2.69
PVT1-201ENST00000504719 ZNF804AQ7Z570 1209 aa31.83■■■□□ 2.69
PVT1-201ENST00000504719 SAPCD2Q86UD0 394 aa31.83■■■□□ 2.69
PVT1-201ENST00000504719 IL1R1P14778 569 aa31.82■■■□□ 2.68
PVT1-201ENST00000504719 MMP14P50281 582 aa31.82■■■□□ 2.68
PVT1-201ENST00000504719 MROH5Q6ZUA9 1318 aa31.81■■■□□ 2.68
PVT1-201ENST00000504719 ANGEL2Q5VTE6 544 aaKnown RBP31.81■■■□□ 2.68
PVT1-201ENST00000504719 SULF1Q8IWU6 871 aa31.81■■■□□ 2.68
PVT1-201ENST00000504719 OGFOD1Q8N543 542 aa31.81■■■□□ 2.68
PVT1-201ENST00000504719 ECE1P42892 770 aa31.8■■■□□ 2.68
PVT1-201ENST00000504719 LRRC24Q50LG9 513 aa31.8■■■□□ 2.68
PVT1-201ENST00000504719 CYP4F22Q6NT55 531 aa31.8■■■□□ 2.68
PVT1-201ENST00000504719 PAXIP1Q6ZW49 1069 aaPredicted RBP31.8■■■□□ 2.68
PVT1-201ENST00000504719 ARHGAP45Q92619 1136 aa31.8■■■□□ 2.68
PVT1-201ENST00000504719 CAPNS2Q96L46 248 aa31.8■■■□□ 2.68
PVT1-201ENST00000504719 KIF16BQ96L93 1317 aa31.79■■■□□ 2.68
PVT1-201ENST00000504719 HHIPL1Q96JK4 782 aa31.79■■■□□ 2.68
PVT1-201ENST00000504719 THSD7BQ9C0I4 1608 aa31.78■■■□□ 2.68
PVT1-201ENST00000504719 PITPNM2Q9BZ72 1349 aa31.78■■■□□ 2.68
PVT1-201ENST00000504719 NBPF9Q3BBW0 867 aa31.77■■■□□ 2.68
PVT1-201ENST00000504719 KIAA0825Q8IV33 1275 aa31.77■■■□□ 2.68
PVT1-201ENST00000504719 KLHDC4Q8TBB5 520 aa31.77■■■□□ 2.68
PVT1-201ENST00000504719 UBTFL1P0CB47 393 aaPredicted RBP31.76■■■□□ 2.67
PVT1-201ENST00000504719 RFX5P48382 616 aaPredicted RBP31.76■■■□□ 2.67
PVT1-201ENST00000504719 WBP1LQ9NX94 342 aa31.76■■■□□ 2.67
PVT1-201ENST00000504719 HDAC9Q9UKV0 1011 aa31.76■■■□□ 2.67
PVT1-201ENST00000504719 WNT10BO00744 389 aa31.75■■■□□ 2.67
PVT1-201ENST00000504719 METTL24Q5JXM2 366 aa31.75■■■□□ 2.67
PVT1-201ENST00000504719 CERS5Q8N5B7 392 aa31.75■■■□□ 2.67
PVT1-201ENST00000504719 GBA2Q9HCG7 927 aaPredicted RBP31.75■■■□□ 2.67
PVT1-201ENST00000504719 GYG1P46976 350 aa31.74■■■□□ 2.67
PVT1-201ENST00000504719 FKBP1AP62942 108 aaKnown RBP31.74■■■□□ 2.67
PVT1-201ENST00000504719 GRM1Q13255 1194 aa31.74■■■□□ 2.67
PVT1-201ENST00000504719 COL13A1Q5TAT6 717 aaPredicted RBP31.74■■■□□ 2.67
PVT1-201ENST00000504719 VGLL2Q8N8G2 317 aa31.74■■■□□ 2.67
PVT1-201ENST00000504719 CDCA5Q96FF9 252 aa31.74■■■□□ 2.67
PVT1-201ENST00000504719 FAM84BQ96KN1 310 aaPredicted RBP31.74■■■□□ 2.67
PVT1-201ENST00000504719 FOXN1O15353 648 aa31.73■■■□□ 2.67
PVT1-201ENST00000504719 HIBADHP31937 336 aaKnown RBP31.73■■■□□ 2.67
PVT1-201ENST00000504719 TDRD7Q8NHU6 1098 aaKnown RBP31.73■■■□□ 2.67
PVT1-201ENST00000504719 BCAR3O75815 825 aa31.72■■■□□ 2.67
PVT1-201ENST00000504719 SASH1O94885 1247 aa31.72■■■□□ 2.67
PVT1-201ENST00000504719 PDE8BO95263 885 aa31.72■■■□□ 2.67
PVT1-201ENST00000504719 MAP2K1Q02750 393 aaPredicted RBP31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms