RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 BMP2KQ9NSY1 1161 aaPredicted RBP19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 GRM8O00222 908 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 ZPR1O75312 459 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 FANCCQ00597 558 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 MTHFSDQ2M296 383 aaKnown RBP19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 CACNA2D4Q7Z3S7 1137 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 CCDC91Q7Z6B0 441 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 TTC37Q6PGP7 1564 aa19.66■□□□□ 0.74
HMGXB3-201ENST00000502717 RHOXF2BP0C7M4 288 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 IBSPP21815 317 aaPredicted RBP19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 MICU3Q86XE3 530 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 RHOXF2Q9BQY4 288 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 ZRANB1Q9UGI0 708 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 TBX22Q9Y458 520 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 ARHGAP6O43182 974 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 FGFR1OPO95684 399 aaKnown RBP19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 KSR2Q6VAB6 950 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 APOBRQ0VD83 1088 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 ZSCAN26Q16670 478 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 ERCC6LQ2NKX8 1250 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 OSBPL3Q9H4L5 887 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 INCENPQ9NQS7 918 aa19.65■□□□□ 0.74
HMGXB3-201ENST00000502717 METTL24Q5JXM2 366 aa19.64■□□□□ 0.74
HMGXB3-201ENST00000502717 ANXA1P04083 346 aa19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 NF2P35240 595 aa19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 CCDC82Q8N4S0 544 aa19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 PA2G4Q9UQ80 394 aaKnown RBP19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 ZFYP08048 801 aaPredicted RBP19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 CHMP4BP1P59074 171 aa19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 TMEM67Q5HYA8 995 aa19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 PPM1EQ8WY54 764 aa19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 PLEKHF1Q96S99 279 aa19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 TMOD3Q9NYL9 352 aa19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 PRDM15P57071 1507 aaPredicted RBP19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 SOGA3Q5TF21 947 aa19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 GPR161Q8N6U8 529 aaKnown RBP19.64■□□□□ 0.73
HMGXB3-201ENST00000502717 IFFO1Q0D2I5 559 aa19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 FLT4P35916 1363 aa19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 PNMA6EA0A0J9YXQ4 647 aa19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 RAB11FIP4Q86YS3 637 aa19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 SLC26A6Q9BXS9 759 aa19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 TMOD2Q9NZR1 351 aa19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 BMP15O95972 392 aa19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 SMC1AQ14683 1233 aaKnown RBP19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 RMND1Q9NWS8 449 aa19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 KIAA0232Q92628 1395 aa19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 FAM114A1Q8IWE2 563 aa19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 TDRD7Q8NHU6 1098 aaKnown RBP19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 RNF41Q9H4P4 317 aaPredicted RBP19.63■□□□□ 0.73
HMGXB3-201ENST00000502717 CFAP74Q9C0B2 1584 aa19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 AKR1B15C9JRZ8 316 aaPredicted RBP19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 MTIF2P46199 727 aaKnown RBP19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 HLTFQ14527 1009 aaKnown RBP eCLIP19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 OTUD6BQ8N6M0 293 aa19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 MKRN1Q9UHC7 482 aaKnown RBP19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 KRT83P78385 493 aa19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 NAA16Q6N069 864 aaPredicted RBP19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 FAM76AQ8TAV0 307 aa19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 CDC25BP30305 580 aa19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 MAATS1Q7Z4T9 603 aa19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 CNGA4Q8IV77 575 aa19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 LINS1Q8NG48 757 aa19.62■□□□□ 0.73
HMGXB3-201ENST00000502717 KRT86O43790 486 aa19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 ME3Q16798 604 aa19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 ZBTB43O43298 467 aa19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 MATR3P43243 847 aaKnown RBP eCLIP19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 NLRP12P59046 1061 aa19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 MAP2K1Q02750 393 aaPredicted RBP19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 BCCIPQ9P287 314 aaKnown RBP eCLIP19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 TRPM2O94759 1503 aa19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 TTC6Q86TZ1 520 aa19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 AFAP1L1Q8TED9 768 aa19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 NSFL1CQ9UNZ2 370 aaKnown RBP19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 MRVI1Q9Y6F6 885 aa19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 ETF1P62495 437 aaKnown RBP19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 UBE3BQ7Z3V4 1068 aa19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 LRP2BPQ9P2M1 347 aa19.61■□□□□ 0.73
HMGXB3-201ENST00000502717 ENOX2Q16206 610 aaKnown RBP19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 DNAJC21Q5F1R6 531 aaKnown RBP19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 CCDC144CPQ8IYA2 1237 aa19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 EFCAB8A8MWE9 144 aa19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 RRAGBQ5VZM2 374 aa19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 EDC4Q6P2E9 1401 aaKnown RBP19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 PRC1O43663 620 aa19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 MYO1BO43795 1136 aa19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 MAP3K12Q12852 859 aa19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 TDRD12Q587J7 1177 aaKnown RBP19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 DYDC1Q8WWB3 177 aa19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 PLXNC1O60486 1568 aa19.6■□□□□ 0.73
HMGXB3-201ENST00000502717 TRIM21P19474 475 aaKnown RBP19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 PSDA5PKW4 1024 aaPredicted RBP19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 BRD3Q15059 726 aa19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 TTF1Q15361 905 aaPredicted RBP19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 CCDC178Q5BJE1 867 aa19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 TSG101Q99816 390 aa19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 ATP8B1O43520 1251 aa19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 NR1I2O75469 434 aa19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 RBM5P52756 815 aaKnown RBP eCLIP19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 XPO4Q9C0E2 1151 aaKnown RBP19.59■□□□□ 0.73
HMGXB3-201ENST00000502717 AFMP43652 599 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms