RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 CPDO75976 1380 aa23.16■■□□□ 1.3
NKX2-1-202ENST00000498187 LLPHQ9BRT6 129 aaKnown RBP23.16■■□□□ 1.3
NKX2-1-202ENST00000498187 DSCC1Q9BVC3 393 aa23.16■■□□□ 1.3
NKX2-1-202ENST00000498187 GPR108Q9NPR9 543 aa23.16■■□□□ 1.3
NKX2-1-202ENST00000498187 IL15P40933 162 aaPredicted RBP23.15■■□□□ 1.3
NKX2-1-202ENST00000498187 ATP2B3Q16720 1220 aa23.15■■□□□ 1.3
NKX2-1-202ENST00000498187 ZSCAN25Q6NSZ9 544 aa23.15■■□□□ 1.3
NKX2-1-202ENST00000498187 APOBRQ0VD83 1088 aa23.15■■□□□ 1.3
NKX2-1-202ENST00000498187 SYCP1Q15431 976 aa23.15■■□□□ 1.3
NKX2-1-202ENST00000498187 ZMYM1Q5SVZ6 1142 aa23.15■■□□□ 1.3
NKX2-1-202ENST00000498187 NSUN7Q8NE18 718 aaKnown RBP23.15■■□□□ 1.3
NKX2-1-202ENST00000498187 CFAP45Q9UL16 551 aa23.15■■□□□ 1.3
NKX2-1-202ENST00000498187 MYH15Q9Y2K3 1946 aa23.14■■□□□ 1.3
NKX2-1-202ENST00000498187 GTPBP4Q9BZE4 634 aaKnown RBP23.14■■□□□ 1.3
NKX2-1-202ENST00000498187 SPATA31A3Q5VYP0 1347 aa23.14■■□□□ 1.29
NKX2-1-202ENST00000498187 SMTNL1A8MU46 457 aa23.14■■□□□ 1.29
NKX2-1-202ENST00000498187 LRRC24Q50LG9 513 aa23.14■■□□□ 1.29
NKX2-1-202ENST00000498187 ZNF594Q96JF6 807 aaPredicted RBP23.14■■□□□ 1.29
NKX2-1-202ENST00000498187 FOSBP53539 338 aa23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 LRMPQ12912 555 aa23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 CLIP2Q9UDT6 1046 aa23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 PAXBP1Q9Y5B6 917 aa23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 A0A0G2JLW4 131 aa23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 PTPDC1A2A3K4 754 aa23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 CTDNEP1O95476 244 aa23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 A1BGP04217 495 aa23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 CDC25BP30305 580 aa23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 EXOSC10Q01780 885 aaKnown RBP23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 CEBPZQ03701 1054 aaKnown RBP23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 ZBTB3Q9H5J0 574 aa23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 NRBP1Q9UHY1 535 aa23.13■■□□□ 1.29
NKX2-1-202ENST00000498187 EYA2O00167 538 aa23.12■■□□□ 1.29
NKX2-1-202ENST00000498187 IFIT1P09914 478 aaKnown RBP23.12■■□□□ 1.29
NKX2-1-202ENST00000498187 HSPD1P10809 573 aaKnown RBP23.12■■□□□ 1.29
NKX2-1-202ENST00000498187 NAA16Q6N069 864 aaPredicted RBP23.12■■□□□ 1.29
NKX2-1-202ENST00000498187 DNAJC25Q9H1X3 360 aa23.12■■□□□ 1.29
NKX2-1-202ENST00000498187 E7EWF7 191 aa23.11■■□□□ 1.29
NKX2-1-202ENST00000498187 CCT2P78371 535 aaKnown RBP23.11■■□□□ 1.29
NKX2-1-202ENST00000498187 C16orf45Q96MC5 204 aaPredicted RBP23.11■■□□□ 1.29
NKX2-1-202ENST00000498187 MAST3O60307 1309 aa23.11■■□□□ 1.29
NKX2-1-202ENST00000498187 UBR2Q8IWV8 1755 aa23.11■■□□□ 1.29
NKX2-1-202ENST00000498187 TNNT1P13805 278 aa23.11■■□□□ 1.29
NKX2-1-202ENST00000498187 ADD1P35611 737 aaKnown RBP23.11■■□□□ 1.29
NKX2-1-202ENST00000498187 FEZ1Q99689 392 aa23.11■■□□□ 1.29
NKX2-1-202ENST00000498187 AGXT2Q9BYV1 514 aa23.11■■□□□ 1.29
NKX2-1-202ENST00000498187 A0A1B0GUL7 405 aa23.1■■□□□ 1.29
NKX2-1-202ENST00000498187 GOLGA6L19H0YKK7 550 aa23.1■■□□□ 1.29
NKX2-1-202ENST00000498187 RNF113AO15541 343 aaKnown RBP23.1■■□□□ 1.29
NKX2-1-202ENST00000498187 TICAM2Q86XR7 235 aa23.1■■□□□ 1.29
NKX2-1-202ENST00000498187 CCDC191Q8NCU4 936 aa23.1■■□□□ 1.29
NKX2-1-202ENST00000498187 PCDH11XQ9BZA7 1347 aa23.1■■□□□ 1.29
NKX2-1-202ENST00000498187 PCDH11YQ9BZA8 1340 aa23.1■■□□□ 1.29
NKX2-1-202ENST00000498187 FTOQ9C0B1 505 aaKnown RBP eCLIP23.09■■□□□ 1.29
NKX2-1-202ENST00000498187 NCOA5Q9HCD5 579 aaKnown RBP23.09■■□□□ 1.29
NKX2-1-202ENST00000498187 NAP1L2Q9ULW6 460 aaPredicted RBP23.09■■□□□ 1.29
NKX2-1-202ENST00000498187 CTAGE5O15320 804 aa23.09■■□□□ 1.29
NKX2-1-202ENST00000498187 PUS3Q9BZE2 481 aaKnown RBP23.09■■□□□ 1.29
NKX2-1-202ENST00000498187 SPEF2Q9C093 1822 aa23.08■■□□□ 1.29
NKX2-1-202ENST00000498187 NEMFO60524 1076 aa23.08■■□□□ 1.29
NKX2-1-202ENST00000498187 SARM1Q6SZW1 724 aa23.08■■□□□ 1.29
NKX2-1-202ENST00000498187 CHST3Q7LGC8 479 aa23.08■■□□□ 1.29
NKX2-1-202ENST00000498187 ZCRB1Q8TBF4 217 aaKnown RBP23.08■■□□□ 1.29
NKX2-1-202ENST00000498187 KCPQ6ZWJ8 1503 aa23.08■■□□□ 1.29
NKX2-1-202ENST00000498187 M0R2C6 588 aa23.08■■□□□ 1.28
NKX2-1-202ENST00000498187 CIAO1O76071 339 aa23.08■■□□□ 1.28
NKX2-1-202ENST00000498187 NCBP1Q09161 790 aaKnown RBP23.08■■□□□ 1.28
NKX2-1-202ENST00000498187 TPD52L1Q16890 204 aaPredicted RBP23.08■■□□□ 1.28
NKX2-1-202ENST00000498187 CACTINQ8WUQ7 758 aaKnown RBP23.08■■□□□ 1.28
NKX2-1-202ENST00000498187 RCOR1Q9UKL0 485 aa23.08■■□□□ 1.28
NKX2-1-202ENST00000498187 XIRP1Q702N8 1843 aaKnown RBP23.08■■□□□ 1.28
NKX2-1-202ENST00000498187 SALL1Q9NSC2 1324 aa23.07■■□□□ 1.28
NKX2-1-202ENST00000498187 PPFIA3O75145 1194 aa23.07■■□□□ 1.28
NKX2-1-202ENST00000498187 CCDC112Q8NEF3 446 aa23.07■■□□□ 1.28
NKX2-1-202ENST00000498187 SPDYE4A6NLX3 237 aa23.07■■□□□ 1.28
NKX2-1-202ENST00000498187 U2AF2P26368 475 aaKnown RBP eCLIP23.07■■□□□ 1.28
NKX2-1-202ENST00000498187 PDIA3P30101 505 aaKnown RBP23.07■■□□□ 1.28
NKX2-1-202ENST00000498187 CCAR1Q8IX12 1150 aaKnown RBP23.07■■□□□ 1.28
NKX2-1-202ENST00000498187 ERVV-2B6SEH9 535 aa23.06■■□□□ 1.28
NKX2-1-202ENST00000498187 TTLL5Q6EMB2 1281 aa23.06■■□□□ 1.28
NKX2-1-202ENST00000498187 MRFAP1L1Q96HT8 127 aa23.06■■□□□ 1.28
NKX2-1-202ENST00000498187 USP28Q96RU2 1077 aa23.06■■□□□ 1.28
NKX2-1-202ENST00000498187 ATG3Q9NT62 314 aa23.06■■□□□ 1.28
NKX2-1-202ENST00000498187 IQCB1Q15051 598 aa23.05■■□□□ 1.28
NKX2-1-202ENST00000498187 TOM1L2Q6ZVM7 507 aa23.05■■□□□ 1.28
NKX2-1-202ENST00000498187 ZNF274Q96GC6 653 aaPredicted RBP23.05■■□□□ 1.28
NKX2-1-202ENST00000498187 FKBP4Q02790 459 aaKnown RBP eCLIP23.05■■□□□ 1.28
NKX2-1-202ENST00000498187 STX1AQ16623 288 aa23.05■■□□□ 1.28
NKX2-1-202ENST00000498187 OSBP2Q969R2 916 aa23.05■■□□□ 1.28
NKX2-1-202ENST00000498187 GOLPH3LQ9H4A5 285 aa23.05■■□□□ 1.28
NKX2-1-202ENST00000498187 CEP126Q9P2H0 1117 aa23.05■■□□□ 1.28
NKX2-1-202ENST00000498187 GUCY1B3Q02153 619 aa23.04■■□□□ 1.28
NKX2-1-202ENST00000498187 CCDC144BQ3MJ40 725 aa23.04■■□□□ 1.28
NKX2-1-202ENST00000498187 CCDC144CPQ8IYA2 1237 aa23.04■■□□□ 1.28
NKX2-1-202ENST00000498187 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.04■■□□□ 1.28
NKX2-1-202ENST00000498187 PAPPAQ13219 1627 aa23.04■■□□□ 1.28
NKX2-1-202ENST00000498187 WDR17Q8IZU2 1322 aa23.04■■□□□ 1.28
NKX2-1-202ENST00000498187 LRRC8AQ8IWT6 810 aa23.04■■□□□ 1.28
NKX2-1-202ENST00000498187 ZNF396Q96N95 335 aaPredicted RBP23.04■■□□□ 1.28
NKX2-1-202ENST00000498187 OGFRQ9NZT2 677 aa23.04■■□□□ 1.28
NKX2-1-202ENST00000498187 ZHX1Q9UKY1 873 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms