RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZNF646O15015 1829 aaPredicted RBP9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 PSME4Q14997 1843 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 KIF13BQ9NQT8 1826 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 ST18O60284 1047 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 SLC5A1P13866 664 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 RXRBP28702 533 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 MNX1P50219 401 aaPredicted RBP9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 FXR2P51116 673 aaKnown RBP eCLIP9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 ANAPC15P60006 121 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 TIMM10P62072 90 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 PUM3Q15397 648 aaKnown RBP9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 CCDC158Q5M9N0 1113 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 TRAPPC3LQ5T215 181 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 ARHGEF1Q92888 912 aaKnown RBP9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 XAGE2Q96GT9 111 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 LSG1Q9H089 658 aaKnown RBP9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 SLKQ9H2G2 1235 aaPredicted RBP9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 CIZ1Q9ULV3 898 aaPredicted RBP9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 RIPOR2Q9Y4F9 1068 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 NDUFB9Q9Y6M9 179 aa9.75□□□□□ -0.85
PDZRN3-212ENST00000498048 K7ELQ4 463 aaPredicted RBP9.74□□□□□ -0.85
PDZRN3-212ENST00000498048 GOLIM4O00461 696 aa9.74□□□□□ -0.85
PDZRN3-212ENST00000498048 HMGB2P26583 209 aaKnown RBP9.74□□□□□ -0.85
PDZRN3-212ENST00000498048 TXNRD1Q16881 649 aa9.74□□□□□ -0.85
PDZRN3-212ENST00000498048 ILDR1Q86SU0 546 aaPredicted RBP9.74□□□□□ -0.85
PDZRN3-212ENST00000498048 PIP4P2Q8N4L2 257 aa9.74□□□□□ -0.85
PDZRN3-212ENST00000498048 KBTBD3Q8NAB2 608 aa9.74□□□□□ -0.85
PDZRN3-212ENST00000498048 FAM227BQ96M60 508 aa9.74□□□□□ -0.85
PDZRN3-212ENST00000498048 SEC31BQ9NQW1 1179 aa9.74□□□□□ -0.85
PDZRN3-212ENST00000498048 PALD1Q9ULE6 856 aa9.74□□□□□ -0.85
PDZRN3-212ENST00000498048 PDE8BO95263 885 aa9.73□□□□□ -0.85
PDZRN3-212ENST00000498048 HSPA4P34932 840 aa9.73□□□□□ -0.85
PDZRN3-212ENST00000498048 C3orf67Q6ZVT6 689 aa9.73□□□□□ -0.85
PDZRN3-212ENST00000498048 ANKRD18AQ8IVF6 992 aa9.73□□□□□ -0.85
PDZRN3-212ENST00000498048 CNBD1Q8NA66 436 aa9.73□□□□□ -0.85
PDZRN3-212ENST00000498048 MYH1P12882 1939 aa9.73□□□□□ -0.85
PDZRN3-212ENST00000498048 DDX60LQ5H9U9 1706 aaKnown RBP9.73□□□□□ -0.85
PDZRN3-212ENST00000498048 COL1A1P02452 1464 aaPredicted RBP9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 CD2BP2O95400 341 aaKnown RBP9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 HSP90AA1P07900 732 aaKnown RBP9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 KCNJ4P48050 445 aa9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 NFIXQ14938 502 aa9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 SF3B3Q15393 1217 aaKnown RBP9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 LRRFIP1Q32MZ4 808 aaKnown RBP9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 LPIN2Q92539 896 aa9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 ANP32EQ9BTT0 268 aa9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 SNRKQ9NRH2 765 aa9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 ADAMTSL1Q8N6G6 1762 aa9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 BRCA1P38398 1863 aaKnown RBP9.72□□□□□ -0.85
PDZRN3-212ENST00000498048 APBA3O96018 575 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 UQCRFS1P1P0C7P4 283 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 FGFR2P21802 821 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 MCAMP43121 646 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 PHKA1P46020 1223 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 NUBP1P53384 320 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 ST5P78524 1137 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 FKBP4Q02790 459 aaKnown RBP eCLIP9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 CHRNDQ07001 517 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 SCARF1Q14162 830 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 ZNF827Q17R98 1081 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 TPTE2Q6XPS3 522 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 ZNF589Q86UQ0 364 aaPredicted RBP9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 SPRYD3Q8NCJ5 442 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 HELBQ8NG08 1087 aaPredicted RBP9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 FBXO41Q8TF61 875 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 IL17RAQ96F46 866 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 NLRP3Q96P20 1036 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 FARP1Q9Y4F1 1045 aaPredicted RBP9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 RBM8AQ9Y5S9 174 aaKnown RBP9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 MAST3O60307 1309 aa9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 RPAP1Q9BWH6 1393 aaPredicted RBP9.71□□□□□ -0.86
PDZRN3-212ENST00000498048 PLSCR1O15162 318 aa9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 TAF5LO75529 589 aa9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 GYS1P13807 737 aa9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 ZAP70P43403 619 aa9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 PTH1RQ03431 593 aa9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 SLC10A5Q5PT55 438 aa9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 PRPF40BQ6NWY9 871 aaKnown RBP9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 PI16Q6UXB8 463 aa9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 TICAM2Q86XR7 235 aa9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 CCDC24Q8N4L8 307 aa9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 SNX14Q9Y5W7 946 aa9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 SLX4Q8IY92 1834 aa9.7□□□□□ -0.86
PDZRN3-212ENST00000498048 ZFYP08048 801 aaPredicted RBP9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 NBR1Q14596 966 aa9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 TTF1Q15361 905 aaPredicted RBP9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 MCMDC2Q4G0Z9 681 aa9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 ZMYM1Q5SVZ6 1142 aa9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 RNF20Q5VTR2 975 aa9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 CCDC102BQ68D86 513 aa9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 PRR5LQ6MZQ0 368 aa9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 CCDC129Q6ZRS4 1044 aa9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 CELF1Q92879 486 aaKnown RBP9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 ZNF512BQ96KM6 892 aaPredicted RBP9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 UPF3BQ9BZI7 483 aaKnown RBP9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 ANTXR1Q9H6X2 564 aa9.69□□□□□ -0.86
PDZRN3-212ENST00000498048 HELLSQ9NRZ9 838 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms