RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 WDR43Q15061 677 aaKnown RBP eCLIP21.41■■□□□ 1.02
SUPT20H-223ENST00000497318 STRIP1Q5VSL9 837 aa21.41■■□□□ 1.02
SUPT20H-223ENST00000497318 FBXW7Q969H0 707 aa21.41■■□□□ 1.02
SUPT20H-223ENST00000497318 WNT10BO00744 389 aa21.4■■□□□ 1.02
SUPT20H-223ENST00000497318 INHBEP58166 350 aa21.4■■□□□ 1.02
SUPT20H-223ENST00000497318 DACT2Q5SW24 774 aa21.4■■□□□ 1.02
SUPT20H-223ENST00000497318 APOBEC3FQ8IUX4 373 aaKnown RBP21.4■■□□□ 1.02
SUPT20H-223ENST00000497318 COA1Q9GZY4 146 aa21.4■■□□□ 1.02
SUPT20H-223ENST00000497318 MED23Q9ULK4 1368 aa21.39■■□□□ 1.02
SUPT20H-223ENST00000497318 PTPN12Q05209 780 aaKnown RBP21.39■■□□□ 1.01
SUPT20H-223ENST00000497318 INTS3Q68E01 1043 aaKnown RBP21.39■■□□□ 1.01
SUPT20H-223ENST00000497318 PHAXQ9H814 394 aaKnown RBP21.39■■□□□ 1.01
SUPT20H-223ENST00000497318 MBIPQ9NS73 344 aa21.39■■□□□ 1.01
SUPT20H-223ENST00000497318 BSDC1Q9NW68 430 aaPredicted RBP21.39■■□□□ 1.01
SUPT20H-223ENST00000497318 COL4A1P02462 1669 aa21.39■■□□□ 1.01
SUPT20H-223ENST00000497318 JARID2Q92833 1246 aaPredicted RBP21.38■■□□□ 1.01
SUPT20H-223ENST00000497318 METTL22Q9BUU2 404 aaPredicted RBP21.38■■□□□ 1.01
SUPT20H-223ENST00000497318 MINPP1Q9UNW1 487 aa21.38■■□□□ 1.01
SUPT20H-223ENST00000497318 MANSC4A6NHS7 340 aaPredicted RBP21.37■■□□□ 1.01
SUPT20H-223ENST00000497318 CALD1Q05682 793 aaKnown RBP21.37■■□□□ 1.01
SUPT20H-223ENST00000497318 PRKG1Q13976 671 aa21.37■■□□□ 1.01
SUPT20H-223ENST00000497318 SPRYD7Q5W111 196 aa21.37■■□□□ 1.01
SUPT20H-223ENST00000497318 SLC10A4Q96EP9 437 aa21.37■■□□□ 1.01
SUPT20H-223ENST00000497318 CCT4P50991 539 aaKnown RBP21.36■■□□□ 1.01
SUPT20H-223ENST00000497318 CTSWP56202 376 aa21.36■■□□□ 1.01
SUPT20H-223ENST00000497318 LDLRAD1Q5T700 205 aa21.36■■□□□ 1.01
SUPT20H-223ENST00000497318 MXD3Q9BW11 206 aa21.36■■□□□ 1.01
SUPT20H-223ENST00000497318 ANGEL1Q9UNK9 670 aaKnown RBP21.36■■□□□ 1.01
SUPT20H-223ENST00000497318 LEMD3Q9Y2U8 911 aa21.36■■□□□ 1.01
SUPT20H-223ENST00000497318 SASH1O94885 1247 aa21.35■■□□□ 1.01
SUPT20H-223ENST00000497318 TTLL5Q6EMB2 1281 aa21.35■■□□□ 1.01
SUPT20H-223ENST00000497318 GNAI1P63096 354 aa21.34■■□□□ 1.01
SUPT20H-223ENST00000497318 TTLL11Q8NHH1 800 aa21.34■■□□□ 1.01
SUPT20H-223ENST00000497318 R3HDMLQ9H3Y0 253 aa21.34■■□□□ 1.01
SUPT20H-223ENST00000497318 TRIM17Q9Y577 477 aa21.34■■□□□ 1.01
SUPT20H-223ENST00000497318 MYBBP1AQ9BQG0 1328 aaKnown RBP21.33■■□□□ 1.01
SUPT20H-223ENST00000497318 ELL2O00472 640 aaPredicted RBP21.33■■□□□ 1.01
SUPT20H-223ENST00000497318 IGHMBP2P38935 993 aaKnown RBP21.33■■□□□ 1.01
SUPT20H-223ENST00000497318 NEXNQ0ZGT2 675 aa21.33■■□□□ 1.01
SUPT20H-223ENST00000497318 CCDC30Q5VVM6 783 aa21.33■■□□□ 1.01
SUPT20H-223ENST00000497318 OTUD7BQ6GQQ9 843 aa21.33■■□□□ 1.01
SUPT20H-223ENST00000497318 ANKRD2Q9GZV1 360 aa21.33■■□□□ 1.01
SUPT20H-223ENST00000497318 IFT57Q9NWB7 429 aa21.33■■□□□ 1.01
SUPT20H-223ENST00000497318 WTIPA6NIX2 430 aaPredicted RBP21.32■■□□□ 1
SUPT20H-223ENST00000497318 UNCXA6NJT0 531 aa21.32■■□□□ 1
SUPT20H-223ENST00000497318 PPP1R12BO60237 982 aaPredicted RBP21.32■■□□□ 1
SUPT20H-223ENST00000497318 ZNF853P0CG23 659 aa21.32■■□□□ 1
SUPT20H-223ENST00000497318 ZBTB48P10074 688 aaPredicted RBP21.32■■□□□ 1
SUPT20H-223ENST00000497318 HABP4Q5JVS0 413 aaKnown RBP21.32■■□□□ 1
SUPT20H-223ENST00000497318 IFNL1Q8IU54 200 aa21.32■■□□□ 1
SUPT20H-223ENST00000497318 KIAA0825Q8IV33 1275 aa21.32■■□□□ 1
SUPT20H-223ENST00000497318 OTOP1Q7RTM1 612 aa21.31■■□□□ 1
SUPT20H-223ENST00000497318 ERO1AQ96HE7 468 aa21.31■■□□□ 1
SUPT20H-223ENST00000497318 DEFB129Q9H1M3 183 aa21.31■■□□□ 1
SUPT20H-223ENST00000497318 GREM2Q9H772 168 aa21.31■■□□□ 1
SUPT20H-223ENST00000497318 ADAMTS8Q9UP79 889 aa21.31■■□□□ 1
SUPT20H-223ENST00000497318 MAP3K2Q9Y2U5 619 aa21.31■■□□□ 1
SUPT20H-223ENST00000497318 DLGAP5Q15398 846 aa21.3■■□□□ 1
SUPT20H-223ENST00000497318 SUPT20HL1Q3ZLR7 823 aa21.3■■□□□ 1
SUPT20H-223ENST00000497318 KSR2Q6VAB6 950 aa21.3■■□□□ 1
SUPT20H-223ENST00000497318 PPP2R3BQ9Y5P8 575 aa21.3■■□□□ 1
SUPT20H-223ENST00000497318 ZNF804BA4D1E1 1349 aa21.29■■□□□ 1
SUPT20H-223ENST00000497318 KCNJ4P48050 445 aa21.29■■□□□ 1
SUPT20H-223ENST00000497318 GTF2IP78347 998 aa21.29■■□□□ 1
SUPT20H-223ENST00000497318 MPHOSPH8Q99549 860 aa21.29■■□□□ 1
SUPT20H-223ENST00000497318 PSME4Q14997 1843 aa21.29■■□□□ 1
SUPT20H-223ENST00000497318 COL1A1P02452 1464 aaPredicted RBP21.28■■□□□ 1
SUPT20H-223ENST00000497318 MYO1BO43795 1136 aa21.28■■□□□ 1
SUPT20H-223ENST00000497318 MAP3K11Q16584 847 aa21.28■■□□□ 1
SUPT20H-223ENST00000497318 ZBED3Q96IU2 234 aaPredicted RBP21.28■■□□□ 1
SUPT20H-223ENST00000497318 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.28■■□□□ 1
SUPT20H-223ENST00000497318 PI4KAP2A4QPH2 592 aa21.27■■□□□ 1
SUPT20H-223ENST00000497318 TXNRD3Q86VQ6 643 aa21.27■■□□□ 1
SUPT20H-223ENST00000497318 PI4KAP1Q8N8J0 262 aa21.27■■□□□ 1
SUPT20H-223ENST00000497318 WNK4Q96J92 1243 aa21.27■■□□□ 1
SUPT20H-223ENST00000497318 PTPN22Q9Y2R2 807 aa21.27■■□□□ 1
SUPT20H-223ENST00000497318 POTEFA5A3E0 1075 aa21.26■□□□□ 0.99
SUPT20H-223ENST00000497318 IGKV5-2P06315 115 aa21.26■□□□□ 0.99
SUPT20H-223ENST00000497318 STK31Q9BXU1 1019 aa21.26■□□□□ 0.99
SUPT20H-223ENST00000497318 EFCC1Q9HA90 598 aa21.26■□□□□ 0.99
SUPT20H-223ENST00000497318 IREB2P48200 963 aaKnown RBP21.25■□□□□ 0.99
SUPT20H-223ENST00000497318 ARHGEF6Q15052 776 aa21.25■□□□□ 0.99
SUPT20H-223ENST00000497318 C8orf58Q8NAV2 365 aa21.25■□□□□ 0.99
SUPT20H-223ENST00000497318 MTMR14Q8NCE2 650 aa21.25■□□□□ 0.99
SUPT20H-223ENST00000497318 IGF2BP3O00425 579 aaKnown RBP eCLIP21.24■□□□□ 0.99
SUPT20H-223ENST00000497318 ARMC5Q96C12 935 aa21.24■□□□□ 0.99
SUPT20H-223ENST00000497318 TMEM106CQ9BVX2 250 aa21.24■□□□□ 0.99
SUPT20H-223ENST00000497318 H7C1W4 665 aa21.23■□□□□ 0.99
SUPT20H-223ENST00000497318 ITGA6P23229 1130 aa21.23■□□□□ 0.99
SUPT20H-223ENST00000497318 UBE3BQ7Z3V4 1068 aa21.23■□□□□ 0.99
SUPT20H-223ENST00000497318 CLMNQ96JQ2 1002 aa21.23■□□□□ 0.99
SUPT20H-223ENST00000497318 CD209Q9NNX6 404 aa21.23■□□□□ 0.99
SUPT20H-223ENST00000497318 FZD1Q9UP38 647 aa21.23■□□□□ 0.99
SUPT20H-223ENST00000497318 NEURL1BA8MQ27 555 aa21.22■□□□□ 0.99
SUPT20H-223ENST00000497318 SP3Q02447 781 aa21.22■□□□□ 0.99
SUPT20H-223ENST00000497318 CRHR2Q13324 411 aa21.22■□□□□ 0.99
SUPT20H-223ENST00000497318 CD99L2Q8TCZ2 262 aa21.22■□□□□ 0.99
SUPT20H-223ENST00000497318 APAF1O14727 1248 aa21.21■□□□□ 0.99
SUPT20H-223ENST00000497318 KLRK1P26718 216 aa21.21■□□□□ 0.99
SUPT20H-223ENST00000497318 CWF19L2Q2TBE0 894 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms