RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 UVSSAQ2YD98 709 aa7.48□□□□□ -1.21
CLK1-214ENST00000496205 KLHDC7BQ96G42 594 aa7.48□□□□□ -1.21
CLK1-214ENST00000496205 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
CLK1-214ENST00000496205 SMNDC1O75940 238 aaKnown RBP eCLIP7.47□□□□□ -1.21
CLK1-214ENST00000496205 CYP2E1P05181 493 aaPredicted RBP7.47□□□□□ -1.21
CLK1-214ENST00000496205 GRIK1P39086 918 aa7.47□□□□□ -1.21
CLK1-214ENST00000496205 C16orf46Q6P387 395 aa7.47□□□□□ -1.21
CLK1-214ENST00000496205 FAM20CQ8IXL6 584 aa7.47□□□□□ -1.21
CLK1-214ENST00000496205 PIK3R5Q8WYR1 880 aa7.47□□□□□ -1.21
CLK1-214ENST00000496205 COL26A1Q96A83 441 aa7.47□□□□□ -1.21
CLK1-214ENST00000496205 SPACA7Q96KW9 195 aa7.47□□□□□ -1.21
CLK1-214ENST00000496205 NOVA2Q9UNW9 492 aaKnown RBP7.47□□□□□ -1.21
CLK1-214ENST00000496205 SCNN1AP37088 669 aa7.46□□□□□ -1.22
CLK1-214ENST00000496205 CLEC10AQ8IUN9 316 aa7.46□□□□□ -1.22
CLK1-214ENST00000496205 KLHL23Q8NBE8 558 aa7.46□□□□□ -1.22
CLK1-214ENST00000496205 SHKBP1Q8TBC3 707 aa7.46□□□□□ -1.22
CLK1-214ENST00000496205 POP1Q99575 1024 aaKnown RBP7.46□□□□□ -1.22
CLK1-214ENST00000496205 FAM83CQ9BQN1 747 aa7.46□□□□□ -1.22
CLK1-214ENST00000496205 PBX4Q9BYU1 374 aa7.46□□□□□ -1.22
CLK1-214ENST00000496205 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.46□□□□□ -1.22
CLK1-214ENST00000496205 ZBTB39O15060 712 aa7.45□□□□□ -1.22
CLK1-214ENST00000496205 KIF4AO95239 1232 aa7.45□□□□□ -1.22
CLK1-214ENST00000496205 WNT11O96014 354 aa7.45□□□□□ -1.22
CLK1-214ENST00000496205 RFX1P22670 979 aa7.45□□□□□ -1.22
CLK1-214ENST00000496205 FAM69CQ0P6D2 419 aa7.45□□□□□ -1.22
CLK1-214ENST00000496205 TTC39BQ5VTQ0 682 aaPredicted RBP7.45□□□□□ -1.22
CLK1-214ENST00000496205 CEP120Q8N960 986 aa7.45□□□□□ -1.22
CLK1-214ENST00000496205 ADGRE2Q9UHX3 823 aa7.45□□□□□ -1.22
CLK1-214ENST00000496205 BMP3P12645 472 aa7.44□□□□□ -1.22
CLK1-214ENST00000496205 HOXA10P31260 410 aaPredicted RBP7.44□□□□□ -1.22
CLK1-214ENST00000496205 ZAP70P43403 619 aa7.44□□□□□ -1.22
CLK1-214ENST00000496205 PREPP48147 710 aa7.44□□□□□ -1.22
CLK1-214ENST00000496205 NAA30Q147X3 362 aaPredicted RBP7.44□□□□□ -1.22
CLK1-214ENST00000496205 GPR152Q8TDT2 470 aa7.44□□□□□ -1.22
CLK1-214ENST00000496205 ADAM19Q9H013 955 aa7.44□□□□□ -1.22
CLK1-214ENST00000496205 SWI5Q1ZZU3 235 aa7.43□□□□□ -1.22
CLK1-214ENST00000496205 LCE1DQ5T752 114 aa7.43□□□□□ -1.22
CLK1-214ENST00000496205 FAM117BQ6P1L5 589 aa7.43□□□□□ -1.22
CLK1-214ENST00000496205 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.43□□□□□ -1.22
CLK1-214ENST00000496205 BEND4Q6ZU67 534 aa7.43□□□□□ -1.22
CLK1-214ENST00000496205 MKNK1Q9BUB5 465 aa7.43□□□□□ -1.22
CLK1-214ENST00000496205 ZMYND15Q9H091 742 aa7.43□□□□□ -1.22
CLK1-214ENST00000496205 KCNF1Q9H3M0 494 aa7.43□□□□□ -1.22
CLK1-214ENST00000496205 SEC31BQ9NQW1 1179 aa7.43□□□□□ -1.22
CLK1-214ENST00000496205 ZMIZ1Q9ULJ6 1067 aa7.43□□□□□ -1.22
CLK1-214ENST00000496205 ACIN1Q9UKV3 1341 aaKnown RBP7.43□□□□□ -1.22
CLK1-214ENST00000496205 ABI2Q9NYB9 513 aaPredicted RBP7.42□□□□□ -1.22
CLK1-214ENST00000496205 ARID1BQ8NFD5 2236 aaPredicted RBP7.42□□□□□ -1.22
CLK1-214ENST00000496205 WDR64B1ANS9 1081 aa7.41□□□□□ -1.22
CLK1-214ENST00000496205 SART1O43290 800 aaKnown RBP7.41□□□□□ -1.22
CLK1-214ENST00000496205 PTPRAP18433 802 aa7.41□□□□□ -1.22
CLK1-214ENST00000496205 FZD5Q13467 585 aa7.41□□□□□ -1.22
CLK1-214ENST00000496205 NCAPG2Q86XI2 1143 aa7.41□□□□□ -1.22
CLK1-214ENST00000496205 C1orf115Q9H7X2 142 aa7.41□□□□□ -1.22
CLK1-214ENST00000496205 FAM13BQ9NYF5 915 aa7.41□□□□□ -1.22
CLK1-214ENST00000496205 FNDC3AQ9Y2H6 1198 aaKnown RBP7.41□□□□□ -1.22
CLK1-214ENST00000496205 ACPPP15309 386 aa7.4□□□□□ -1.22
CLK1-214ENST00000496205 NLRP12P59046 1061 aa7.4□□□□□ -1.22
CLK1-214ENST00000496205 HGSNATQ68CP4 663 aa7.4□□□□□ -1.22
CLK1-214ENST00000496205 STK32AQ8WU08 396 aa7.4□□□□□ -1.22
CLK1-214ENST00000496205 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.22
CLK1-214ENST00000496205 TMEM63CQ9P1W3 806 aa7.4□□□□□ -1.22
CLK1-214ENST00000496205 CNTN3Q9P232 1028 aa7.4□□□□□ -1.22
CLK1-214ENST00000496205 KANSL3Q9P2N6 904 aa7.4□□□□□ -1.22
CLK1-214ENST00000496205 H3BRJ5 948 aa7.39□□□□□ -1.23
CLK1-214ENST00000496205 NFKBIEO00221 500 aa7.39□□□□□ -1.23
CLK1-214ENST00000496205 ANKRD34AQ69YU3 496 aa7.39□□□□□ -1.23
CLK1-214ENST00000496205 ABI1Q8IZP0 508 aa7.39□□□□□ -1.23
CLK1-214ENST00000496205 MFSD14AQ96MC6 490 aa7.39□□□□□ -1.23
CLK1-214ENST00000496205 RNF208Q9H0X6 261 aa7.39□□□□□ -1.23
CLK1-214ENST00000496205 CXXC1Q9P0U4 656 aaPredicted RBP7.39□□□□□ -1.23
CLK1-214ENST00000496205 TRPA1O75762 1119 aa7.38□□□□□ -1.23
CLK1-214ENST00000496205 PIP4K2BP78356 416 aa7.38□□□□□ -1.23
CLK1-214ENST00000496205 SHISA5Q8N114 240 aa7.38□□□□□ -1.23
CLK1-214ENST00000496205 HHIPQ96QV1 700 aa7.38□□□□□ -1.23
CLK1-214ENST00000496205 RUSC1Q9BVN2 902 aa7.38□□□□□ -1.23
CLK1-214ENST00000496205 ELP3Q9H9T3 547 aa7.38□□□□□ -1.23
CLK1-214ENST00000496205 STIM2Q9P246 746 aa7.38□□□□□ -1.23
CLK1-214ENST00000496205 SALL4Q9UJQ4 1053 aa7.38□□□□□ -1.23
CLK1-214ENST00000496205 ZNF777Q9ULD5 760 aaPredicted RBP7.38□□□□□ -1.23
CLK1-214ENST00000496205 MAP4P27816 1152 aaKnown RBP7.37□□□□□ -1.23
CLK1-214ENST00000496205 SGO2Q562F6 1265 aa7.37□□□□□ -1.23
CLK1-214ENST00000496205 SLC7A3Q8WY07 619 aa7.37□□□□□ -1.23
CLK1-214ENST00000496205 WNT8BQ93098 351 aa7.37□□□□□ -1.23
CLK1-214ENST00000496205 OSGEPQ9NPF4 335 aa7.37□□□□□ -1.23
CLK1-214ENST00000496205 PIM2Q9P1W9 311 aa7.37□□□□□ -1.23
CLK1-214ENST00000496205 F13BP05160 661 aa7.36□□□□□ -1.23
CLK1-214ENST00000496205 ELOAQ14241 798 aaKnown RBP7.36□□□□□ -1.23
CLK1-214ENST00000496205 NFXL1Q6ZNB6 911 aa7.36□□□□□ -1.23
CLK1-214ENST00000496205 DZANK1Q9NVP4 752 aa7.36□□□□□ -1.23
CLK1-214ENST00000496205 HIF3AQ9Y2N7 669 aa7.36□□□□□ -1.23
CLK1-214ENST00000496205 CABP4P57796 275 aa7.35□□□□□ -1.23
CLK1-214ENST00000496205 MSMPQ1L6U9 139 aa7.35□□□□□ -1.23
CLK1-214ENST00000496205 PDE12Q6L8Q7 609 aaKnown RBP7.35□□□□□ -1.23
CLK1-214ENST00000496205 FDX2Q6P4F2 183 aa7.35□□□□□ -1.23
CLK1-214ENST00000496205 ATCAYQ86WG3 371 aa7.35□□□□□ -1.23
CLK1-214ENST00000496205 FBXL6Q8N531 539 aa7.35□□□□□ -1.23
CLK1-214ENST00000496205 C1orf127Q8N9H9 656 aa7.35□□□□□ -1.23
CLK1-214ENST00000496205 NUDT16Q96DE0 195 aaKnown RBP7.35□□□□□ -1.23
CLK1-214ENST00000496205 MEGF11A6BM72 1044 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms