RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 H3BQV1 296 aa18.11■□□□□ 0.49
CALD1-222ENST00000495522 HCLS1P14317 486 aaPredicted RBP18.11■□□□□ 0.49
CALD1-222ENST00000495522 PIP4K2BP78356 416 aa18.11■□□□□ 0.49
CALD1-222ENST00000495522 HLFQ16534 295 aa18.11■□□□□ 0.49
CALD1-222ENST00000495522 IFFO2Q5TF58 517 aa18.11■□□□□ 0.49
CALD1-222ENST00000495522 RIC1Q4ADV7 1423 aa18.11■□□□□ 0.49
CALD1-222ENST00000495522 CYP19A1P11511 503 aaPredicted RBP18.11■□□□□ 0.49
CALD1-222ENST00000495522 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.11■□□□□ 0.49
CALD1-222ENST00000495522 GPTP24298 496 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 APOBRQ0VD83 1088 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 RESTQ13127 1097 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 DDX11Q96FC9 970 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 ZSCAN16Q9H4T2 348 aaPredicted RBP18.1■□□□□ 0.49
CALD1-222ENST00000495522 CTNNA3Q9UI47 895 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 ANKRD36CQ5JPF3 1778 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 GOLGA6L4A6NEF3 574 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 UBAP1LF5GYI3 381 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 ZNF500O60304 480 aaPredicted RBP18.1■□□□□ 0.49
CALD1-222ENST00000495522 HMGN5P82970 282 aaKnown RBP18.1■□□□□ 0.49
CALD1-222ENST00000495522 ATP2B3Q16720 1220 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 METTL24Q5JXM2 366 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 NSUN7Q8NE18 718 aaKnown RBP18.1■□□□□ 0.49
CALD1-222ENST00000495522 TTLL11Q8NHH1 800 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 LEO1Q8WVC0 666 aaPredicted RBP18.1■□□□□ 0.49
CALD1-222ENST00000495522 KIF3AQ9Y496 699 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 RIPOR2Q9Y4F9 1068 aa18.1■□□□□ 0.49
CALD1-222ENST00000495522 PLCH1Q4KWH8 1693 aa18.09■□□□□ 0.49
CALD1-222ENST00000495522 A0A0G2JLW4 131 aa18.09■□□□□ 0.49
CALD1-222ENST00000495522 ITGA6P23229 1130 aa18.09■□□□□ 0.49
CALD1-222ENST00000495522 CTSWP56202 376 aa18.09■□□□□ 0.49
CALD1-222ENST00000495522 WASHC4Q2M389 1173 aa18.09■□□□□ 0.49
CALD1-222ENST00000495522 SYNE4Q8N205 404 aa18.09■□□□□ 0.49
CALD1-222ENST00000495522 SLC4A9Q96Q91 983 aa18.09■□□□□ 0.49
CALD1-222ENST00000495522 TFIP11Q9UBB9 837 aaKnown RBP18.09■□□□□ 0.49
CALD1-222ENST00000495522 ANKRD18BA2A2Z9 1011 aa18.08■□□□□ 0.49
CALD1-222ENST00000495522 PTMAP06454 111 aaKnown RBP18.08■□□□□ 0.49
CALD1-222ENST00000495522 SCARF1Q14162 830 aa18.08■□□□□ 0.49
CALD1-222ENST00000495522 LDHAL6AQ6ZMR3 332 aa18.08■□□□□ 0.49
CALD1-222ENST00000495522 CHMP4CQ96CF2 233 aa18.08■□□□□ 0.49
CALD1-222ENST00000495522 NUP62CLQ9H1M0 184 aa18.08■□□□□ 0.49
CALD1-222ENST00000495522 GREM2Q9H772 168 aa18.08■□□□□ 0.49
CALD1-222ENST00000495522 CCDC192P0DO97 292 aa18.08■□□□□ 0.48
CALD1-222ENST00000495522 LIG1P18858 919 aa18.08■□□□□ 0.48
CALD1-222ENST00000495522 ZAP70P43403 619 aa18.08■□□□□ 0.48
CALD1-222ENST00000495522 NAA16Q6N069 864 aaPredicted RBP18.08■□□□□ 0.48
CALD1-222ENST00000495522 APPBP2Q92624 585 aa18.08■□□□□ 0.48
CALD1-222ENST00000495522 ZNF274Q96GC6 653 aaPredicted RBP18.08■□□□□ 0.48
CALD1-222ENST00000495522 USP25Q9UHP3 1055 aa18.08■□□□□ 0.48
CALD1-222ENST00000495522 ZBTB1Q9Y2K1 713 aa18.08■□□□□ 0.48
CALD1-222ENST00000495522 EXOC5O00471 708 aa18.07■□□□□ 0.48
CALD1-222ENST00000495522 IRS4O14654 1257 aaPredicted RBP18.07■□□□□ 0.48
CALD1-222ENST00000495522 OFD1O75665 1012 aa18.07■□□□□ 0.48
CALD1-222ENST00000495522 MAP3K11Q16584 847 aa18.07■□□□□ 0.48
CALD1-222ENST00000495522 TTLL5Q6EMB2 1281 aa18.07■□□□□ 0.48
CALD1-222ENST00000495522 FBXL16Q8N461 479 aa18.07■□□□□ 0.48
CALD1-222ENST00000495522 PHLPP1O60346 1717 aa18.07■□□□□ 0.48
CALD1-222ENST00000495522 MYH3P11055 1940 aa18.07■□□□□ 0.48
CALD1-222ENST00000495522 PTPDC1A2A3K4 754 aa18.07■□□□□ 0.48
CALD1-222ENST00000495522 IMMTQ16891 758 aaKnown RBP18.07■□□□□ 0.48
CALD1-222ENST00000495522 CNNM1Q9NRU3 951 aa18.07■□□□□ 0.48
CALD1-222ENST00000495522 TRMT112Q9UI30 125 aaKnown RBP18.07■□□□□ 0.48
CALD1-222ENST00000495522 ERVV-1B6SEH8 477 aa18.06■□□□□ 0.48
CALD1-222ENST00000495522 CTDNEP1O95476 244 aa18.06■□□□□ 0.48
CALD1-222ENST00000495522 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.06■□□□□ 0.48
CALD1-222ENST00000495522 CERKQ8TCT0 537 aa18.06■□□□□ 0.48
CALD1-222ENST00000495522 DDX19AQ9NUU7 478 aaKnown RBP18.06■□□□□ 0.48
CALD1-222ENST00000495522 CFAP45Q9UL16 551 aa18.06■□□□□ 0.48
CALD1-222ENST00000495522 FOXP2O15409 715 aa18.06■□□□□ 0.48
CALD1-222ENST00000495522 PDIA3P30101 505 aaKnown RBP18.06■□□□□ 0.48
CALD1-222ENST00000495522 SYTL4Q96C24 671 aaPredicted RBP18.06■□□□□ 0.48
CALD1-222ENST00000495522 ZNF512BQ96KM6 892 aaPredicted RBP18.06■□□□□ 0.48
CALD1-222ENST00000495522 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.06■□□□□ 0.48
CALD1-222ENST00000495522 MYH7P12883 1935 aa18.05■□□□□ 0.48
CALD1-222ENST00000495522 NWD2Q9ULI1 1742 aa18.05■□□□□ 0.48
CALD1-222ENST00000495522 PDE8AO60658 829 aa18.05■□□□□ 0.48
CALD1-222ENST00000495522 KDM4AO75164 1064 aa18.05■□□□□ 0.48
CALD1-222ENST00000495522 ADCY5O95622 1261 aa18.05■□□□□ 0.48
CALD1-222ENST00000495522 IL6STP40189 918 aaPredicted RBP18.05■□□□□ 0.48
CALD1-222ENST00000495522 CCT2P78371 535 aaKnown RBP18.05■□□□□ 0.48
CALD1-222ENST00000495522 DACT1Q9NYF0 836 aa18.05■□□□□ 0.48
CALD1-222ENST00000495522 NAP1L2Q9ULW6 460 aaPredicted RBP18.05■□□□□ 0.48
CALD1-222ENST00000495522 NUP98P52948 1817 aa18.05■□□□□ 0.48
CALD1-222ENST00000495522 SALL1Q9NSC2 1324 aa18.05■□□□□ 0.48
CALD1-222ENST00000495522 MCAMP43121 646 aa18.04■□□□□ 0.48
CALD1-222ENST00000495522 ZSCAN25Q6NSZ9 544 aa18.04■□□□□ 0.48
CALD1-222ENST00000495522 PI16Q6UXB8 463 aa18.04■□□□□ 0.48
CALD1-222ENST00000495522 VGLL2Q8N8G2 317 aa18.04■□□□□ 0.48
CALD1-222ENST00000495522 PUS7LQ9H0K6 701 aaKnown RBP18.04■□□□□ 0.48
CALD1-222ENST00000495522 FGAP02671 866 aa18.04■□□□□ 0.48
CALD1-222ENST00000495522 EVCP57679 992 aa18.04■□□□□ 0.48
CALD1-222ENST00000495522 CHST3Q7LGC8 479 aa18.04■□□□□ 0.48
CALD1-222ENST00000495522 DZIP3Q86Y13 1208 aaKnown RBP18.04■□□□□ 0.48
CALD1-222ENST00000495522 TNMDQ9H2S6 317 aa18.04■□□□□ 0.48
CALD1-222ENST00000495522 NCOA5Q9HCD5 579 aaKnown RBP18.04■□□□□ 0.48
CALD1-222ENST00000495522 WNK3Q9BYP7 1800 aa18.04■□□□□ 0.48
CALD1-222ENST00000495522 COL16A1Q07092 1604 aaPredicted RBP18.03■□□□□ 0.48
CALD1-222ENST00000495522 TTF1Q15361 905 aaPredicted RBP18.03■□□□□ 0.48
CALD1-222ENST00000495522 BICD2Q8TD16 824 aa18.03■□□□□ 0.48
CALD1-222ENST00000495522 PGBD1Q96JS3 809 aa18.03■□□□□ 0.48
CALD1-222ENST00000495522 GPAA1O43292 621 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms