RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 VGLL2Q8N8G2 317 aa20.2■□□□□ 0.82
YIF1A-209ENST00000494836 COA1Q9GZY4 146 aa20.2■□□□□ 0.82
YIF1A-209ENST00000494836 CHMP4BQ9H444 224 aaKnown RBP20.2■□□□□ 0.82
YIF1A-209ENST00000494836 SCN9AQ15858 1988 aa20.19■□□□□ 0.82
YIF1A-209ENST00000494836 PNMA6EA0A0J9YXQ4 647 aa20.19■□□□□ 0.82
YIF1A-209ENST00000494836 PDE8BO95263 885 aa20.19■□□□□ 0.82
YIF1A-209ENST00000494836 IL15P40933 162 aaPredicted RBP20.19■□□□□ 0.82
YIF1A-209ENST00000494836 ATG9AQ7Z3C6 839 aa20.19■□□□□ 0.82
YIF1A-209ENST00000494836 IRS2Q9Y4H2 1338 aa20.19■□□□□ 0.82
YIF1A-209ENST00000494836 PSMD14O00487 310 aa20.18■□□□□ 0.82
YIF1A-209ENST00000494836 LMOD1P29536 600 aaPredicted RBP20.18■□□□□ 0.82
YIF1A-209ENST00000494836 ZNF804AQ7Z570 1209 aa20.18■□□□□ 0.82
YIF1A-209ENST00000494836 KCNQ5Q9NR82 932 aa20.18■□□□□ 0.82
YIF1A-209ENST00000494836 HACL1Q9UJ83 578 aa20.18■□□□□ 0.82
YIF1A-209ENST00000494836 GMPSP49915 693 aaPredicted RBP20.17■□□□□ 0.82
YIF1A-209ENST00000494836 SCNN1DP51172 638 aa20.17■□□□□ 0.82
YIF1A-209ENST00000494836 ATP8B2P98198 1209 aa20.17■□□□□ 0.82
YIF1A-209ENST00000494836 PUM3Q15397 648 aaKnown RBP20.17■□□□□ 0.82
YIF1A-209ENST00000494836 PSME4Q14997 1843 aa20.17■□□□□ 0.82
YIF1A-209ENST00000494836 TOMM70O94826 608 aa20.16■□□□□ 0.82
YIF1A-209ENST00000494836 SSH3Q8TE77 659 aa20.16■□□□□ 0.82
YIF1A-209ENST00000494836 TAF1DQ9H5J8 278 aaPredicted RBP20.16■□□□□ 0.82
YIF1A-209ENST00000494836 ZBTB40Q9NUA8 1239 aa20.16■□□□□ 0.82
YIF1A-209ENST00000494836 CEP126Q9P2H0 1117 aa20.16■□□□□ 0.82
YIF1A-209ENST00000494836 USP17L3A6NCW0 530 aa20.15■□□□□ 0.82
YIF1A-209ENST00000494836 USP17L4A6NCW7 530 aa20.15■□□□□ 0.82
YIF1A-209ENST00000494836 EPHX2P34913 555 aa20.15■□□□□ 0.82
YIF1A-209ENST00000494836 POLA2Q14181 598 aa20.15■□□□□ 0.82
YIF1A-209ENST00000494836 CEP85Q6P2H3 762 aa20.15■□□□□ 0.82
YIF1A-209ENST00000494836 USP17L1Q7RTZ2 530 aa20.15■□□□□ 0.82
YIF1A-209ENST00000494836 CD209Q9NNX6 404 aa20.15■□□□□ 0.82
YIF1A-209ENST00000494836 GPRC5DQ9NZD1 345 aa20.15■□□□□ 0.82
YIF1A-209ENST00000494836 VIL1P09327 827 aaKnown RBP20.14■□□□□ 0.81
YIF1A-209ENST00000494836 RPS12P25398 132 aaKnown RBP20.14■□□□□ 0.81
YIF1A-209ENST00000494836 ZBTB12Q9Y330 459 aaPredicted RBP20.14■□□□□ 0.81
YIF1A-209ENST00000494836 IFIT1P09914 478 aaKnown RBP20.13■□□□□ 0.81
YIF1A-209ENST00000494836 SLC5A1P13866 664 aa20.13■□□□□ 0.81
YIF1A-209ENST00000494836 FGFR2P21802 821 aa20.13■□□□□ 0.81
YIF1A-209ENST00000494836 EPS15P42566 896 aa20.13■□□□□ 0.81
YIF1A-209ENST00000494836 GYG1P46976 350 aa20.13■□□□□ 0.81
YIF1A-209ENST00000494836 G3BP1Q13283 466 aaKnown RBP eCLIP20.13■□□□□ 0.811e-7■□□□□ 8.5
YIF1A-209ENST00000494836 RBM46Q8TBY0 533 aaKnown RBP20.13■□□□□ 0.81
YIF1A-209ENST00000494836 LPIN2Q92539 896 aa20.13■□□□□ 0.81
YIF1A-209ENST00000494836 FBXW7Q969H0 707 aa20.13■□□□□ 0.81
YIF1A-209ENST00000494836 ZNF609O15014 1411 aa20.12■□□□□ 0.81
YIF1A-209ENST00000494836 IL1R1P14778 569 aa20.12■□□□□ 0.81
YIF1A-209ENST00000494836 HIBADHP31937 336 aaKnown RBP20.12■□□□□ 0.81
YIF1A-209ENST00000494836 ATP2B3Q16720 1220 aa20.12■□□□□ 0.81
YIF1A-209ENST00000494836 CAVIN4Q5BKX8 364 aa20.12■□□□□ 0.81
YIF1A-209ENST00000494836 STRIP1Q5VSL9 837 aa20.12■□□□□ 0.81
YIF1A-209ENST00000494836 RSBN1LQ6PCB5 846 aaPredicted RBP20.12■□□□□ 0.81
YIF1A-209ENST00000494836 PNMA8AQ86V59 439 aaPredicted RBP20.12■□□□□ 0.81
YIF1A-209ENST00000494836 VPS37DQ86XT2 251 aa20.12■□□□□ 0.81
YIF1A-209ENST00000494836 DPF2Q92785 391 aa20.12■□□□□ 0.81
YIF1A-209ENST00000494836 FAM84BQ96KN1 310 aaPredicted RBP20.12■□□□□ 0.81
YIF1A-209ENST00000494836 C1QTNF8P60827 252 aa20.11■□□□□ 0.81
YIF1A-209ENST00000494836 EAPPQ56P03 285 aaPredicted RBP20.11■□□□□ 0.81
YIF1A-209ENST00000494836 DACT2Q5SW24 774 aa20.11■□□□□ 0.81
YIF1A-209ENST00000494836 AGBL3Q8NEM8 1001 aa20.11■□□□□ 0.81
YIF1A-209ENST00000494836 CNOT7Q9UIV1 285 aaKnown RBP20.11■□□□□ 0.81
YIF1A-209ENST00000494836 ZNF646O15015 1829 aaPredicted RBP20.11■□□□□ 0.81
YIF1A-209ENST00000494836 SURF6O75683 361 aaKnown RBP20.1■□□□□ 0.81
YIF1A-209ENST00000494836 GTF2IP78347 998 aa20.1■□□□□ 0.81
YIF1A-209ENST00000494836 TFCP2Q12800 502 aa20.1■□□□□ 0.81
YIF1A-209ENST00000494836 OS9Q13438 667 aaPredicted RBP20.1■□□□□ 0.81
YIF1A-209ENST00000494836 TTLL5Q6EMB2 1281 aa20.1■□□□□ 0.81
YIF1A-209ENST00000494836 RPAP2Q8IXW5 612 aaPredicted RBP20.1■□□□□ 0.81
YIF1A-209ENST00000494836 MICALL2Q8IY33 904 aa20.1■□□□□ 0.81
YIF1A-209ENST00000494836 ADARB2Q9NS39 739 aaKnown RBP20.1■□□□□ 0.81
YIF1A-209ENST00000494836 MYO3BQ8WXR4 1341 aa20.09■□□□□ 0.81
YIF1A-209ENST00000494836 H7C1D1 291 aa20.09■□□□□ 0.81
YIF1A-209ENST00000494836 HMMRO75330 724 aa20.09■□□□□ 0.81
YIF1A-209ENST00000494836 POTEIP0CG38 1075 aa20.09■□□□□ 0.81
YIF1A-209ENST00000494836 POTEJP0CG39 1038 aa20.09■□□□□ 0.81
YIF1A-209ENST00000494836 USP50Q70EL3 339 aaPredicted RBP20.09■□□□□ 0.81
YIF1A-209ENST00000494836 FBXO33Q7Z6M2 555 aa20.09■□□□□ 0.81
YIF1A-209ENST00000494836 LDHDQ86WU2 507 aa20.09■□□□□ 0.81
YIF1A-209ENST00000494836 SMC1BQ8NDV3 1235 aa20.09■□□□□ 0.81
YIF1A-209ENST00000494836 AKAP2Q9Y2D5 859 aa20.09■□□□□ 0.81
YIF1A-209ENST00000494836 ARAP2Q8WZ64 1704 aa20.08■□□□□ 0.81
YIF1A-209ENST00000494836 TDRD7Q8NHU6 1098 aaKnown RBP20.08■□□□□ 0.81
YIF1A-209ENST00000494836 NOP58Q9Y2X3 529 aaKnown RBP20.08■□□□□ 0.81
YIF1A-209ENST00000494836 ADAMTSL1Q8N6G6 1762 aa20.08■□□□□ 0.8
YIF1A-209ENST00000494836 SHTN1A0MZ66 631 aa20.07■□□□□ 0.8
YIF1A-209ENST00000494836 SASH1O94885 1247 aa20.07■□□□□ 0.8
YIF1A-209ENST00000494836 BCAMP50895 628 aa20.07■□□□□ 0.8
YIF1A-209ENST00000494836 FSTL1Q12841 308 aa20.07■□□□□ 0.8
YIF1A-209ENST00000494836 GMLQ99445 158 aa20.07■□□□□ 0.8
YIF1A-209ENST00000494836 MXD3Q9BW11 206 aa20.07■□□□□ 0.8
YIF1A-209ENST00000494836 CLEC11AQ9Y240 323 aa20.07■□□□□ 0.8
YIF1A-209ENST00000494836 FRAT2O75474 233 aaPredicted RBP20.06■□□□□ 0.8
YIF1A-209ENST00000494836 USP17L8P0C7I0 530 aa20.06■□□□□ 0.8
YIF1A-209ENST00000494836 CHADLQ6NUI6 762 aa20.06■□□□□ 0.8
YIF1A-209ENST00000494836 IQSEC3Q9UPP2 1182 aaPredicted RBP20.06■□□□□ 0.8
YIF1A-209ENST00000494836 JAG2Q9Y219 1238 aa20.06■□□□□ 0.8
YIF1A-209ENST00000494836 FAM205AQ6ZU69 1335 aa20.05■□□□□ 0.8
YIF1A-209ENST00000494836 A0A1B0GUL7 405 aa20.05■□□□□ 0.8
YIF1A-209ENST00000494836 SIRT2Q8IXJ6 389 aa20.05■□□□□ 0.8
YIF1A-209ENST00000494836 TRPM4Q8TD43 1214 aa20.05■□□□□ 0.8
YIF1A-209ENST00000494836 ADORA1P30542 326 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms