RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 TMEM102Q8N9M5 508 aaPredicted RBP12.75□□□□□ -0.37
HMGB3P14-201ENST00000494195 CCDC74AQ96AQ1 378 aa12.75□□□□□ -0.37
HMGB3P14-201ENST00000494195 POP1Q99575 1024 aaKnown RBP12.75□□□□□ -0.37
HMGB3P14-201ENST00000494195 PDE2AO00408 941 aaPredicted RBP12.74□□□□□ -0.37
HMGB3P14-201ENST00000494195 MAPK8P45983 427 aa12.74□□□□□ -0.37
HMGB3P14-201ENST00000494195 KCNMA1Q12791 1236 aa12.74□□□□□ -0.37
HMGB3P14-201ENST00000494195 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
HMGB3P14-201ENST00000494195 TMCO4Q5TGY1 634 aa12.74□□□□□ -0.37
HMGB3P14-201ENST00000494195 ILDR2Q71H61 639 aa12.74□□□□□ -0.37
HMGB3P14-201ENST00000494195 NPHS2Q9NP85 383 aa12.74□□□□□ -0.37
HMGB3P14-201ENST00000494195 A0A1W2PP55 124 aa12.73□□□□□ -0.37
HMGB3P14-201ENST00000494195 TRPA1O75762 1119 aa12.73□□□□□ -0.37
HMGB3P14-201ENST00000494195 PTPRAP18433 802 aa12.72□□□□□ -0.37
HMGB3P14-201ENST00000494195 BAG6P46379 1132 aa12.72□□□□□ -0.37
HMGB3P14-201ENST00000494195 DMRTC2Q8IXT2 367 aaPredicted RBP12.72□□□□□ -0.37
HMGB3P14-201ENST00000494195 IL22RA1Q8N6P7 574 aa12.72□□□□□ -0.37
HMGB3P14-201ENST00000494195 HHIPQ96QV1 700 aa12.72□□□□□ -0.37
HMGB3P14-201ENST00000494195 LACRTQ9GZZ8 138 aa12.72□□□□□ -0.37
HMGB3P14-201ENST00000494195 P4HBP07237 508 aaKnown RBP12.71□□□□□ -0.37
HMGB3P14-201ENST00000494195 COL8A1P27658 744 aa12.71□□□□□ -0.37
HMGB3P14-201ENST00000494195 COL19A1Q14993 1142 aa12.71□□□□□ -0.37
HMGB3P14-201ENST00000494195 KIAA0319Q5VV43 1072 aa12.71□□□□□ -0.37
HMGB3P14-201ENST00000494195 ALYREFQ86V81 257 aaKnown RBP12.71□□□□□ -0.37
HMGB3P14-201ENST00000494195 NXPE3Q969Y0 559 aa12.71□□□□□ -0.37
HMGB3P14-201ENST00000494195 CDC27P30260 824 aa12.7□□□□□ -0.38
HMGB3P14-201ENST00000494195 BHLHE41Q9C0J9 482 aaPredicted RBP12.7□□□□□ -0.38
HMGB3P14-201ENST00000494195 ADAM19Q9H013 955 aa12.7□□□□□ -0.38
HMGB3P14-201ENST00000494195 MUC3BQ9H195 1237 aa12.7□□□□□ -0.38
HMGB3P14-201ENST00000494195 FAM177BA6PVY3 158 aa12.69□□□□□ -0.38
HMGB3P14-201ENST00000494195 ERCC3P19447 782 aa12.69□□□□□ -0.38
HMGB3P14-201ENST00000494195 PRRT3Q5FWE3 981 aa12.69□□□□□ -0.38
HMGB3P14-201ENST00000494195 ADAMTSL4Q6UY14 1074 aa12.69□□□□□ -0.38
HMGB3P14-201ENST00000494195 DTWD1Q8N5C7 304 aa12.69□□□□□ -0.38
HMGB3P14-201ENST00000494195 A0A0A0MRY4 1105 aa12.68□□□□□ -0.38
HMGB3P14-201ENST00000494195 GSK3AP49840 483 aa12.68□□□□□ -0.38
HMGB3P14-201ENST00000494195 RAC1P63000 192 aa12.68□□□□□ -0.38
HMGB3P14-201ENST00000494195 ATP2B2Q01814 1243 aa12.68□□□□□ -0.38
HMGB3P14-201ENST00000494195 RASSF7Q02833 373 aa12.68□□□□□ -0.38
HMGB3P14-201ENST00000494195 TRIM28Q13263 835 aaKnown RBP12.68□□□□□ -0.38
HMGB3P14-201ENST00000494195 NPAS4Q8IUM7 802 aa12.68□□□□□ -0.38
HMGB3P14-201ENST00000494195 EPS8L3Q8TE67 593 aaKnown RBP12.68□□□□□ -0.38
HMGB3P14-201ENST00000494195 FBF1Q8TES7 1133 aa12.68□□□□□ -0.38
HMGB3P14-201ENST00000494195 LIN7BQ9HAP6 207 aa12.68□□□□□ -0.38
HMGB3P14-201ENST00000494195 PPME1Q9Y570 386 aa12.68□□□□□ -0.38
HMGB3P14-201ENST00000494195 ALG1LQ6GMV1 187 aa12.67□□□□□ -0.38
HMGB3P14-201ENST00000494195 CCNJLQ8IV13 435 aa12.67□□□□□ -0.38
HMGB3P14-201ENST00000494195 EHD4Q9H223 541 aa12.67□□□□□ -0.38
HMGB3P14-201ENST00000494195 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
HMGB3P14-201ENST00000494195 GADD45BO75293 160 aaPredicted RBP12.66□□□□□ -0.38
HMGB3P14-201ENST00000494195 SPATA31C1P0DKV0 1188 aa12.66□□□□□ -0.38
HMGB3P14-201ENST00000494195 TCF12Q99081 682 aa12.66□□□□□ -0.38
HMGB3P14-201ENST00000494195 SH2B1Q9NRF2 756 aaPredicted RBP12.66□□□□□ -0.38
HMGB3P14-201ENST00000494195 ASAP3Q8TDY4 903 aa12.65□□□□□ -0.38
HMGB3P14-201ENST00000494195 BSNDQ8WZ55 320 aa12.65□□□□□ -0.38
HMGB3P14-201ENST00000494195 SOX13Q9UN79 622 aa12.65□□□□□ -0.38
HMGB3P14-201ENST00000494195 FAM229AH3BQW9 127 aa12.64□□□□□ -0.39
HMGB3P14-201ENST00000494195 LDHBP07195 334 aaKnown RBP12.64□□□□□ -0.39
HMGB3P14-201ENST00000494195 EPHA1P21709 976 aa12.64□□□□□ -0.39
HMGB3P14-201ENST00000494195 EAPPQ56P03 285 aaPredicted RBP12.64□□□□□ -0.39
HMGB3P14-201ENST00000494195 FMR1NBQ8N0W7 255 aaPredicted RBP12.64□□□□□ -0.39
HMGB3P14-201ENST00000494195 DCAF5Q96JK2 942 aa12.64□□□□□ -0.39
HMGB3P14-201ENST00000494195 SETDB2Q96T68 719 aa12.64□□□□□ -0.39
HMGB3P14-201ENST00000494195 SRA1Q9HD15 236 aaKnown RBP12.64□□□□□ -0.39
HMGB3P14-201ENST00000494195 WWC3Q9ULE0 1092 aa12.64□□□□□ -0.39
HMGB3P14-201ENST00000494195 CABP4P57796 275 aa12.63□□□□□ -0.39
HMGB3P14-201ENST00000494195 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.63□□□□□ -0.39
HMGB3P14-201ENST00000494195 PI16Q6UXB8 463 aa12.63□□□□□ -0.39
HMGB3P14-201ENST00000494195 MAP4K3Q8IVH8 894 aa12.63□□□□□ -0.39
HMGB3P14-201ENST00000494195 TRAK1Q9UPV9 953 aa12.63□□□□□ -0.39
HMGB3P14-201ENST00000494195 METTL12A8MUP2 240 aa12.62□□□□□ -0.39
HMGB3P14-201ENST00000494195 ELNP15502 786 aa12.62□□□□□ -0.39
HMGB3P14-201ENST00000494195 MFAP1P55081 439 aaKnown RBP12.62□□□□□ -0.39
HMGB3P14-201ENST00000494195 FGD1P98174 961 aa12.62□□□□□ -0.39
HMGB3P14-201ENST00000494195 GRM2Q14416 872 aa12.62□□□□□ -0.39
HMGB3P14-201ENST00000494195 PRPF40BQ6NWY9 871 aaKnown RBP12.62□□□□□ -0.39
HMGB3P14-201ENST00000494195 FAM117BQ6P1L5 589 aa12.62□□□□□ -0.39
HMGB3P14-201ENST00000494195 FBXO11Q86XK2 927 aa12.62□□□□□ -0.39
HMGB3P14-201ENST00000494195 H3BRJ5 948 aa12.61□□□□□ -0.39
HMGB3P14-201ENST00000494195 LINC01387J3KSC0 135 aa12.61□□□□□ -0.39
HMGB3P14-201ENST00000494195 GDF11O95390 407 aa12.61□□□□□ -0.39
HMGB3P14-201ENST00000494195 TMEM151AQ8N4L1 468 aa12.61□□□□□ -0.39
HMGB3P14-201ENST00000494195 A0A096LPE4 126 aa12.6□□□□□ -0.39
HMGB3P14-201ENST00000494195 A0A1W2PPZ6 126 aa12.6□□□□□ -0.39
HMGB3P14-201ENST00000494195 DEAF1O75398 565 aaPredicted RBP12.6□□□□□ -0.39
HMGB3P14-201ENST00000494195 CDC25BP30305 580 aa12.6□□□□□ -0.39
HMGB3P14-201ENST00000494195 GRIA4P48058 902 aa12.6□□□□□ -0.39
HMGB3P14-201ENST00000494195 SETDB1Q15047 1291 aa12.6□□□□□ -0.39
HMGB3P14-201ENST00000494195 TXNDC11Q6PKC3 985 aa12.6□□□□□ -0.39
HMGB3P14-201ENST00000494195 PRPF40AO75400 957 aaKnown RBP12.59□□□□□ -0.39
HMGB3P14-201ENST00000494195 VN1R5Q7Z5H4 357 aa12.59□□□□□ -0.39
HMGB3P14-201ENST00000494195 GLIS3Q8NEA6 775 aa12.59□□□□□ -0.39
HMGB3P14-201ENST00000494195 DCAF11Q8TEB1 546 aa12.59□□□□□ -0.39
HMGB3P14-201ENST00000494195 BCO2Q9BYV7 579 aa12.59□□□□□ -0.39
HMGB3P14-201ENST00000494195 ABCB6Q9NP58 842 aa12.59□□□□□ -0.39
HMGB3P14-201ENST00000494195 KRBA1A5PL33 1030 aa12.58□□□□□ -0.4
HMGB3P14-201ENST00000494195 SPRED3Q2MJR0 410 aa12.58□□□□□ -0.4
HMGB3P14-201ENST00000494195 FBXO33Q7Z6M2 555 aa12.58□□□□□ -0.4
HMGB3P14-201ENST00000494195 PPP4R2Q9NY27 417 aa12.58□□□□□ -0.4
HMGB3P14-201ENST00000494195 TMEM238LA0A1B0GVL6 79 aa12.57□□□□□ -0.4
HMGB3P14-201ENST00000494195 FSCN2O14926 492 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms