RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 F8W031 263 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-208ENST00000493991 TCIRG1Q13488 830 aa12.88□□□□□ -0.35
COL2A1-208ENST00000493991 TRMT1Q9NXH9 659 aaKnown RBP12.88□□□□□ -0.35
COL2A1-208ENST00000493991 CFAP45Q9UL16 551 aa12.88□□□□□ -0.35
COL2A1-208ENST00000493991 ADGRL3Q9HAR2 1447 aa12.87□□□□□ -0.35
COL2A1-208ENST00000493991 UBE2HP62256 183 aa12.87□□□□□ -0.35
COL2A1-208ENST00000493991 SKIDA1Q1XH10 827 aa12.87□□□□□ -0.35
COL2A1-208ENST00000493991 ZSCAN25Q6NSZ9 544 aa12.87□□□□□ -0.35
COL2A1-208ENST00000493991 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-208ENST00000493991 GOLGA8AA7E2F4 631 aa12.87□□□□□ -0.35
COL2A1-208ENST00000493991 HOMER1Q86YM7 354 aa12.87□□□□□ -0.35
COL2A1-208ENST00000493991 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-208ENST00000493991 SEC31BQ9NQW1 1179 aa12.87□□□□□ -0.35
COL2A1-208ENST00000493991 SLC12A7Q9Y666 1083 aa12.87□□□□□ -0.35
COL2A1-208ENST00000493991 PPLO60437 1756 aa12.87□□□□□ -0.35
COL2A1-208ENST00000493991 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 POLA2Q14181 598 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 CAVIN4Q5BKX8 364 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 ARMT1Q9H993 441 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 TFCP2L1Q9NZI6 479 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 SLC4A4Q9Y6R1 1079 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 COL3A1P02461 1466 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-208ENST00000493991 GPAA1O43292 621 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 MED14O60244 1454 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 CDC42BPGQ6DT37 1551 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 MBD4O95243 580 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 KLHL10Q6JEL2 608 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 FTOQ9C0B1 505 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL2A1-208ENST00000493991 DNAJC25Q9H1X3 360 aa12.86□□□□□ -0.35
COL2A1-208ENST00000493991 BRD1O95696 1058 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 DHX32Q7L7V1 743 aaKnown RBP12.85□□□□□ -0.35
COL2A1-208ENST00000493991 CCAR1Q8IX12 1150 aaKnown RBP12.85□□□□□ -0.35
COL2A1-208ENST00000493991 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 PHKBQ93100 1093 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 KIF24Q5T7B8 1368 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 GNPATO15228 680 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 CYP21A2P08686 494 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 MCM5P33992 734 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 METAP2P50579 478 aaKnown RBP eCLIP12.85□□□□□ -0.35
COL2A1-208ENST00000493991 DHX8Q14562 1220 aaKnown RBP12.85□□□□□ -0.35
COL2A1-208ENST00000493991 NOLC1Q14978 699 aaKnown RBP eCLIP12.85□□□□□ -0.35
COL2A1-208ENST00000493991 LUZP1Q86V48 1076 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 UTP14AQ9BVJ6 771 aaKnown RBP12.85□□□□□ -0.35
COL2A1-208ENST00000493991 GJB4Q9NTQ9 266 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 HMG20BQ9P0W2 317 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 ZNF652Q9Y2D9 606 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 SPATA31A3Q5VYP0 1347 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 ATP10DQ9P241 1426 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
COL2A1-208ENST00000493991 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 CLSTN1O94985 981 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 ZNF165P49910 485 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 AMOTL1Q8IY63 956 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 MYOM1P52179 1685 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 SIGLEC1Q9BZZ2 1709 aa12.85□□□□□ -0.35
COL2A1-208ENST00000493991 ATP5JP18859 108 aa12.84□□□□□ -0.35
COL2A1-208ENST00000493991 INTS4Q96HW7 963 aaKnown RBP12.84□□□□□ -0.35
COL2A1-208ENST00000493991 VAT1LQ9HCJ6 419 aa12.84□□□□□ -0.35
COL2A1-208ENST00000493991 PHKA1P46020 1223 aa12.84□□□□□ -0.35
COL2A1-208ENST00000493991 RBM5P52756 815 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL2A1-208ENST00000493991 HMGN5P82970 282 aaKnown RBP12.84□□□□□ -0.35
COL2A1-208ENST00000493991 CTDSPL2Q05D32 466 aa12.84□□□□□ -0.35
COL2A1-208ENST00000493991 BCAMP50895 628 aa12.84□□□□□ -0.35
COL2A1-208ENST00000493991 SPECC1Q5M775 1068 aa12.84□□□□□ -0.35
COL2A1-208ENST00000493991 DZIP1Q86YF9 867 aaKnown RBP12.84□□□□□ -0.35
COL2A1-208ENST00000493991 A0A1B0GVL5 298 aa12.83□□□□□ -0.35
COL2A1-208ENST00000493991 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.35
COL2A1-208ENST00000493991 USP5P45974 858 aa12.83□□□□□ -0.35
COL2A1-208ENST00000493991 IKQ13123 557 aaPredicted RBP12.83□□□□□ -0.35
COL2A1-208ENST00000493991 CCDC152Q4G0S7 254 aa12.83□□□□□ -0.35
COL2A1-208ENST00000493991 ANO6Q4KMQ2 910 aa12.83□□□□□ -0.35
COL2A1-208ENST00000493991 MFSD6Q6ZSS7 791 aa12.83□□□□□ -0.35
COL2A1-208ENST00000493991 COPRSQ9NQ92 184 aa12.83□□□□□ -0.35
COL2A1-208ENST00000493991 INCENPQ9NQS7 918 aa12.83□□□□□ -0.35
COL2A1-208ENST00000493991 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.35
COL2A1-208ENST00000493991 MYO5BQ9ULV0 1848 aa12.83□□□□□ -0.35
COL2A1-208ENST00000493991 ANKRD18AQ8IVF6 992 aa12.83□□□□□ -0.36
COL2A1-208ENST00000493991 ZDHHC9Q9Y397 364 aa12.83□□□□□ -0.36
COL2A1-208ENST00000493991 ARHGEF28Q8N1W1 1705 aaKnown RBP12.83□□□□□ -0.36
COL2A1-208ENST00000493991 RFC4P35249 363 aa12.83□□□□□ -0.36
COL2A1-208ENST00000493991 GYG1P46976 350 aa12.83□□□□□ -0.36
COL2A1-208ENST00000493991 SETDB2Q96T68 719 aa12.83□□□□□ -0.36
COL2A1-208ENST00000493991 ALG1Q9BT22 464 aa12.83□□□□□ -0.36
COL2A1-208ENST00000493991 STX8Q9UNK0 236 aa12.83□□□□□ -0.36
COL2A1-208ENST00000493991 HMGB1P09429 215 aaKnown RBP12.82□□□□□ -0.36
COL2A1-208ENST00000493991 ERVV-2B6SEH9 535 aa12.82□□□□□ -0.36
COL2A1-208ENST00000493991 HSPD1P10809 573 aaKnown RBP12.82□□□□□ -0.36
COL2A1-208ENST00000493991 PDE4CQ08493 712 aa12.82□□□□□ -0.36
COL2A1-208ENST00000493991 NOL7Q9UMY1 257 aaKnown RBP12.82□□□□□ -0.36
COL2A1-208ENST00000493991 KCNQ2O43526 872 aa12.82□□□□□ -0.36
COL2A1-208ENST00000493991 SERPINC1P01008 464 aa12.82□□□□□ -0.36
COL2A1-208ENST00000493991 LIG1P18858 919 aa12.82□□□□□ -0.36
COL2A1-208ENST00000493991 ADD1P35611 737 aaKnown RBP12.82□□□□□ -0.36
COL2A1-208ENST00000493991 CDC5LQ99459 802 aaKnown RBP12.82□□□□□ -0.36
COL2A1-208ENST00000493991 TMX1Q9H3N1 280 aa12.82□□□□□ -0.36
COL2A1-208ENST00000493991 ZNF532Q9HCE3 1301 aa12.81□□□□□ -0.36
COL2A1-208ENST00000493991 A0A0G2JLW4 131 aa12.81□□□□□ -0.36
COL2A1-208ENST00000493991 E7EWF7 191 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms