RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 CTU1Q7Z7A3 348 aaKnown RBP17.67■□□□□ 0.42
SAMM50-204ENST00000493161 PI4KAP1Q8N8J0 262 aa17.67■□□□□ 0.42
SAMM50-204ENST00000493161 SPEF2Q9C093 1822 aa17.67■□□□□ 0.42
SAMM50-204ENST00000493161 TBC1D8O95759 1140 aa17.66■□□□□ 0.42
SAMM50-204ENST00000493161 DDX58O95786 925 aaKnown RBP17.66■□□□□ 0.42
SAMM50-204ENST00000493161 CWF19L2Q2TBE0 894 aaKnown RBP17.66■□□□□ 0.42
SAMM50-204ENST00000493161 CCDC30Q5VVM6 783 aa17.66■□□□□ 0.42
SAMM50-204ENST00000493161 KSR2Q6VAB6 950 aa17.66■□□□□ 0.42
SAMM50-204ENST00000493161 CDC5LQ99459 802 aaKnown RBP17.66■□□□□ 0.42
SAMM50-204ENST00000493161 PRKRIP1Q9H875 184 aaPredicted RBP17.66■□□□□ 0.42
SAMM50-204ENST00000493161 BSDC1Q9NW68 430 aaPredicted RBP17.66■□□□□ 0.42
SAMM50-204ENST00000493161 MED23Q9ULK4 1368 aa17.66■□□□□ 0.42
SAMM50-204ENST00000493161 CCT4P50991 539 aaKnown RBP17.65■□□□□ 0.42
SAMM50-204ENST00000493161 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
SAMM50-204ENST00000493161 FBXW7Q969H0 707 aa17.65■□□□□ 0.42
SAMM50-204ENST00000493161 WNT10BO00744 389 aa17.64■□□□□ 0.41
SAMM50-204ENST00000493161 SASH1O94885 1247 aa17.64■□□□□ 0.41
SAMM50-204ENST00000493161 KLRK1P26718 216 aa17.64■□□□□ 0.41
SAMM50-204ENST00000493161 CALD1Q05682 793 aaKnown RBP17.64■□□□□ 0.41
SAMM50-204ENST00000493161 MKRN3Q13064 507 aaKnown RBP17.64■□□□□ 0.41
SAMM50-204ENST00000493161 G2E3Q7L622 706 aa17.64■□□□□ 0.41
SAMM50-204ENST00000493161 REM2Q8IYK8 340 aaPredicted RBP17.64■□□□□ 0.41
SAMM50-204ENST00000493161 NEURL1BA8MQ27 555 aa17.63■□□□□ 0.41
SAMM50-204ENST00000493161 TTLL12Q14166 644 aaPredicted RBP17.63■□□□□ 0.41
SAMM50-204ENST00000493161 ZNF296Q8WUU4 475 aaPredicted RBP17.63■□□□□ 0.41
SAMM50-204ENST00000493161 HPS5Q9UPZ3 1129 aa17.63■□□□□ 0.41
SAMM50-204ENST00000493161 H7C1W4 665 aa17.62■□□□□ 0.41
SAMM50-204ENST00000493161 STRIP1Q5VSL9 837 aa17.62■□□□□ 0.41
SAMM50-204ENST00000493161 UBE3BQ7Z3V4 1068 aa17.62■□□□□ 0.41
SAMM50-204ENST00000493161 PTPN12Q05209 780 aaKnown RBP17.61■□□□□ 0.41
SAMM50-204ENST00000493161 PRKG1Q13976 671 aa17.61■□□□□ 0.41
SAMM50-204ENST00000493161 COA1Q9GZY4 146 aa17.61■□□□□ 0.41
SAMM50-204ENST00000493161 R3HDMLQ9H3Y0 253 aa17.61■□□□□ 0.41
SAMM50-204ENST00000493161 FZD1Q9UP38 647 aa17.61■□□□□ 0.41
SAMM50-204ENST00000493161 MYH3P11055 1940 aa17.6■□□□□ 0.41
SAMM50-204ENST00000493161 TM4SF4P48230 202 aa17.6■□□□□ 0.41
SAMM50-204ENST00000493161 KIAA0825Q8IV33 1275 aa17.6■□□□□ 0.41
SAMM50-204ENST00000493161 OGFOD1Q8N543 542 aa17.6■□□□□ 0.41
SAMM50-204ENST00000493161 HDAC9Q9UKV0 1011 aa17.6■□□□□ 0.41
SAMM50-204ENST00000493161 ZNF804BA4D1E1 1349 aa17.59■□□□□ 0.41
SAMM50-204ENST00000493161 NEXNQ0ZGT2 675 aa17.59■□□□□ 0.41
SAMM50-204ENST00000493161 TTLL5Q6EMB2 1281 aa17.59■□□□□ 0.41
SAMM50-204ENST00000493161 ZBED3Q96IU2 234 aaPredicted RBP17.59■□□□□ 0.41
SAMM50-204ENST00000493161 LEMD3Q9Y2U8 911 aa17.59■□□□□ 0.41
SAMM50-204ENST00000493161 MYO3BQ8WXR4 1341 aa17.58■□□□□ 0.4
SAMM50-204ENST00000493161 GPR25O00155 361 aa17.58■□□□□ 0.4
SAMM50-204ENST00000493161 SNAP23O00161 211 aa17.58■□□□□ 0.4
SAMM50-204ENST00000493161 ITGA6P23229 1130 aa17.58■□□□□ 0.4
SAMM50-204ENST00000493161 IGHMBP2P38935 993 aaKnown RBP17.58■□□□□ 0.4
SAMM50-204ENST00000493161 CASP7P55210 303 aa17.58■□□□□ 0.4
SAMM50-204ENST00000493161 GTF2IP78347 998 aa17.58■□□□□ 0.4
SAMM50-204ENST00000493161 CCDC184Q52MB2 194 aa17.58■□□□□ 0.4
SAMM50-204ENST00000493161 PCDHAC2Q9Y5I4 1007 aa17.58■□□□□ 0.4
SAMM50-204ENST00000493161 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
SAMM50-204ENST00000493161 NF2P35240 595 aa17.57■□□□□ 0.4
SAMM50-204ENST00000493161 GCKRQ14397 625 aa17.57■□□□□ 0.4
SAMM50-204ENST00000493161 STK31Q9BXU1 1019 aa17.57■□□□□ 0.4
SAMM50-204ENST00000493161 PKN2Q16513 984 aaKnown RBP17.56■□□□□ 0.4
SAMM50-204ENST00000493161 TWISTNBQ3B726 338 aaPredicted RBP17.56■□□□□ 0.4
SAMM50-204ENST00000493161 LDLRAD1Q5T700 205 aa17.56■□□□□ 0.4
SAMM50-204ENST00000493161 CERS5Q8N5B7 392 aa17.56■□□□□ 0.4
SAMM50-204ENST00000493161 PLA2G12BQ9BX93 195 aa17.56■□□□□ 0.4
SAMM50-204ENST00000493161 CHMP4AQ9BY43 222 aa17.56■□□□□ 0.4
SAMM50-204ENST00000493161 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.56■□□□□ 0.4
SAMM50-204ENST00000493161 PDE4DIPQ5VU43 2346 aa17.56■□□□□ 0.4
SAMM50-204ENST00000493161 IRS2Q9Y4H2 1338 aa17.55■□□□□ 0.4
SAMM50-204ENST00000493161 CSF1RP07333 972 aa17.55■□□□□ 0.4
SAMM50-204ENST00000493161 CHRNDQ07001 517 aa17.55■□□□□ 0.4
SAMM50-204ENST00000493161 SPRYD7Q5W111 196 aa17.55■□□□□ 0.4
SAMM50-204ENST00000493161 ARMC9Q7Z3E5 817 aa17.55■□□□□ 0.4
SAMM50-204ENST00000493161 HELBQ8NG08 1087 aaPredicted RBP17.55■□□□□ 0.4
SAMM50-204ENST00000493161 ANKRD2Q9GZV1 360 aa17.55■□□□□ 0.4
SAMM50-204ENST00000493161 CD209Q9NNX6 404 aa17.55■□□□□ 0.4
SAMM50-204ENST00000493161 ANGEL1Q9UNK9 670 aaKnown RBP17.55■□□□□ 0.4
SAMM50-204ENST00000493161 AOX1Q06278 1338 aa17.54■□□□□ 0.4
SAMM50-204ENST00000493161 TAF5LO75529 589 aa17.54■□□□□ 0.4
SAMM50-204ENST00000493161 APOBEC3FQ8IUX4 373 aaKnown RBP17.54■□□□□ 0.4
SAMM50-204ENST00000493161 WWC1Q8IX03 1113 aa17.54■□□□□ 0.4
SAMM50-204ENST00000493161 MPHOSPH8Q99549 860 aa17.54■□□□□ 0.4
SAMM50-204ENST00000493161 SSC5DA1L4H1 1573 aa17.53■□□□□ 0.4
SAMM50-204ENST00000493161 KCNJ4P48050 445 aa17.53■□□□□ 0.4
SAMM50-204ENST00000493161 SREBF2Q12772 1141 aa17.53■□□□□ 0.4
SAMM50-204ENST00000493161 FLIIQ13045 1269 aa17.53■□□□□ 0.4
SAMM50-204ENST00000493161 NOM1Q5C9Z4 860 aaKnown RBP17.53■□□□□ 0.4
SAMM50-204ENST00000493161 CLMNQ96JQ2 1002 aa17.53■□□□□ 0.4
SAMM50-204ENST00000493161 DEFB129Q9H1M3 183 aa17.53■□□□□ 0.4
SAMM50-204ENST00000493161 FKTNO75072 461 aa17.52■□□□□ 0.4
SAMM50-204ENST00000493161 PRPF38BQ5VTL8 546 aaKnown RBP17.52■□□□□ 0.4
SAMM50-204ENST00000493161 FBXO46Q6PJ61 603 aaPredicted RBP17.52■□□□□ 0.4
SAMM50-204ENST00000493161 CFHR5Q9BXR6 569 aa17.52■□□□□ 0.4
SAMM50-204ENST00000493161 F8W031 263 aaPredicted RBP17.51■□□□□ 0.39
SAMM50-204ENST00000493161 MMP14P50281 582 aa17.51■□□□□ 0.39
SAMM50-204ENST00000493161 FOXO4P98177 505 aa17.51■□□□□ 0.39
SAMM50-204ENST00000493161 FKBP5Q13451 457 aaPredicted RBP17.51■□□□□ 0.39
SAMM50-204ENST00000493161 DLGAP5Q15398 846 aa17.51■□□□□ 0.39
SAMM50-204ENST00000493161 DNAAF4Q8WXU2 420 aa17.51■□□□□ 0.39
SAMM50-204ENST00000493161 JAG2Q9Y219 1238 aa17.51■□□□□ 0.39
SAMM50-204ENST00000493161 CLRN2A0PK11 232 aa17.5■□□□□ 0.39
SAMM50-204ENST00000493161 ANKRD18BA2A2Z9 1011 aa17.5■□□□□ 0.39
SAMM50-204ENST00000493161 CCDC27Q2M243 656 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms