RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	CNOT7	Q9UIV1	285 aa	Known RBP	13.89	□□□□□ -0.19
GGA1-222	ENST00000489772	SCN4A	P35499	1836 aa		13.89	□□□□□ -0.19
GGA1-222	ENST00000489772	MYH3	P11055	1940 aa		13.89	□□□□□ -0.19
GGA1-222	ENST00000489772	PLIN1	O60240	522 aa		13.88	□□□□□ -0.19
GGA1-222	ENST00000489772	VIL1	P09327	827 aa	Known RBP	13.88	□□□□□ -0.19
GGA1-222	ENST00000489772	MICALL2	Q8IY33	904 aa		13.88	□□□□□ -0.19
GGA1-222	ENST00000489772	MROH5	Q6ZUA9	1318 aa		13.88	□□□□□ -0.19
GGA1-222	ENST00000489772	USP17L3	A6NCW0	530 aa		13.87	□□□□□ -0.19
GGA1-222	ENST00000489772	USP17L4	A6NCW7	530 aa		13.87	□□□□□ -0.19
GGA1-222	ENST00000489772	GNAI3	P08754	354 aa		13.87	□□□□□ -0.19
GGA1-222	ENST00000489772	KLRK1	P26718	216 aa		13.87	□□□□□ -0.19
GGA1-222	ENST00000489772	MAP1S	Q66K74	1059 aa	Predicted RBP	13.87	□□□□□ -0.19
GGA1-222	ENST00000489772	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.87	□□□□□ -0.19
GGA1-222	ENST00000489772	USP17L1	Q7RTZ2	530 aa		13.87	□□□□□ -0.19
GGA1-222	ENST00000489772	TXNRD3	Q86VQ6	643 aa		13.87	□□□□□ -0.19
GGA1-222	ENST00000489772	CNTROB	Q8N137	903 aa		13.87	□□□□□ -0.19
GGA1-222	ENST00000489772	CLUAP1	Q96AJ1	413 aa		13.87	□□□□□ -0.19
GGA1-222	ENST00000489772	PUS3	Q9BZE2	481 aa	Known RBP	13.87	□□□□□ -0.19
GGA1-222	ENST00000489772	SNAP23	O00161	211 aa		13.86	□□□□□ -0.19
GGA1-222	ENST00000489772	C15orf52	Q6ZUT6	534 aa	Known RBP	13.86	□□□□□ -0.19
GGA1-222	ENST00000489772	FTSJ3	Q8IY81	847 aa	Known RBP	13.86	□□□□□ -0.19
GGA1-222	ENST00000489772	AGBL3	Q8NEM8	1001 aa		13.86	□□□□□ -0.19
GGA1-222	ENST00000489772	MEIS3	Q99687	375 aa		13.86	□□□□□ -0.19
GGA1-222	ENST00000489772	RIPOR2	Q9Y4F9	1068 aa		13.86	□□□□□ -0.19
GGA1-222	ENST00000489772	LRRFIP2	Q9Y608	721 aa	Known RBP	13.86	□□□□□ -0.19
GGA1-222	ENST00000489772	METTL24	Q5JXM2	366 aa		13.85	□□□□□ -0.19
GGA1-222	ENST00000489772	STRIP1	Q5VSL9	837 aa		13.85	□□□□□ -0.19
GGA1-222	ENST00000489772	ZNF804A	Q7Z570	1209 aa		13.85	□□□□□ -0.19
GGA1-222	ENST00000489772	ZC3H15	Q8WU90	426 aa	Known RBP	13.85	□□□□□ -0.19
GGA1-222	ENST00000489772	FBXW7	Q969H0	707 aa		13.85	□□□□□ -0.19
GGA1-222	ENST00000489772	PASK	Q96RG2	1323 aa		13.85	□□□□□ -0.19
GGA1-222	ENST00000489772	SHTN1	A0MZ66	631 aa		13.84	□□□□□ -0.19
GGA1-222	ENST00000489772	ITGBL1	O95965	494 aa	Predicted RBP	13.84	□□□□□ -0.19
GGA1-222	ENST00000489772	HTRA3	P83110	453 aa		13.84	□□□□□ -0.19
GGA1-222	ENST00000489772	UBE4A	Q14139	1066 aa		13.84	□□□□□ -0.19
GGA1-222	ENST00000489772	LRRC24	Q50LG9	513 aa		13.84	□□□□□ -0.19
GGA1-222	ENST00000489772	KLHDC4	Q8TBB5	520 aa		13.84	□□□□□ -0.19
GGA1-222	ENST00000489772	CD209	Q9NNX6	404 aa		13.84	□□□□□ -0.19
GGA1-222	ENST00000489772	TNN	Q9UQP3	1299 aa		13.84	□□□□□ -0.19
GGA1-222	ENST00000489772	IRS2	Q9Y4H2	1338 aa		13.84	□□□□□ -0.19
GGA1-222	ENST00000489772	USP17L8	P0C7I0	530 aa		13.83	□□□□□ -0.19
GGA1-222	ENST00000489772	RFX5	P48382	616 aa	Predicted RBP	13.83	□□□□□ -0.19
GGA1-222	ENST00000489772	HIRA	P54198	1017 aa	Predicted RBP	13.83	□□□□□ -0.19
GGA1-222	ENST00000489772	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.83	□□□□□ -0.19
GGA1-222	ENST00000489772	DACT2	Q5SW24	774 aa		13.83	□□□□□ -0.19
GGA1-222	ENST00000489772	TTLL5	Q6EMB2	1281 aa		13.83	□□□□□ -0.19
GGA1-222	ENST00000489772	SAMD7	Q7Z3H4	446 aa		13.83	□□□□□ -0.19
GGA1-222	ENST00000489772	TMEM57	Q8N5G2	664 aa		13.83	□□□□□ -0.19
GGA1-222	ENST00000489772	TRPM4	Q8TD43	1214 aa		13.83	□□□□□ -0.19
GGA1-222	ENST00000489772	CREBZF	Q9NS37	354 aa		13.83	□□□□□ -0.19
GGA1-222	ENST00000489772	MYO3B	Q8WXR4	1341 aa		13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	EYA2	O00167	538 aa		13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	PDE8B	O95263	885 aa		13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	GNAI2	P04899	355 aa		13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	ZNF280A	P59817	542 aa	Predicted RBP	13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	PTPN12	Q05209	780 aa	Known RBP	13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	RBM26	Q5T8P6	1007 aa	Known RBP	13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	DZIP1L	Q8IYY4	767 aa	Known RBP	13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	OGFOD1	Q8N543	542 aa		13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	GML	Q99445	158 aa		13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	PGAP2	Q9UHJ9	254 aa		13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	FBXO3	Q9UK99	471 aa		13.83	□□□□□ -0.2
GGA1-222	ENST00000489772	ZNF609	O15014	1411 aa		13.82	□□□□□ -0.2
GGA1-222	ENST00000489772	IL1R1	P14778	569 aa		13.82	□□□□□ -0.2
GGA1-222	ENST00000489772	GTF2I	P78347	998 aa		13.82	□□□□□ -0.2
GGA1-222	ENST00000489772	KIF4B	Q2VIQ3	1234 aa		13.82	□□□□□ -0.2
GGA1-222	ENST00000489772	VPS37D	Q86XT2	251 aa		13.82	□□□□□ -0.2
GGA1-222	ENST00000489772	DNAJC5G	Q8N7S2	189 aa		13.82	□□□□□ -0.2
GGA1-222	ENST00000489772	MXD3	Q9BW11	206 aa		13.82	□□□□□ -0.2
GGA1-222	ENST00000489772	SPEF2	Q9C093	1822 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	ADAMTSL1	Q8N6G6	1762 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	TMEM88B	A6NKF7	163 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	SRGAP3	O43295	1099 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	CIAO1	O76071	339 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	EGFR	P00533	1210 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	HIBADH	P31937	336 aa	Known RBP	13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	MMP14	P50281	582 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	PUM3	Q15397	648 aa	Known RBP	13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	CAVIN4	Q5BKX8	364 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	ITPRIP	Q8IWB1	547 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	VGLL2	Q8N8G2	317 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	SIL1	Q9H173	461 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	MYOZ2	Q9NPC6	264 aa		13.81	□□□□□ -0.2
GGA1-222	ENST00000489772	SASH1	O94885	1247 aa		13.8	□□□□□ -0.2
GGA1-222	ENST00000489772	MS4A1	P11836	297 aa		13.8	□□□□□ -0.2
GGA1-222	ENST00000489772	GYG1	P46976	350 aa		13.8	□□□□□ -0.2
GGA1-222	ENST00000489772	MTX1	Q13505	466 aa		13.8	□□□□□ -0.2
GGA1-222	ENST00000489772	CDC37L1	Q7L3B6	337 aa		13.8	□□□□□ -0.2
GGA1-222	ENST00000489772	KLRG1	Q96E93	195 aa		13.8	□□□□□ -0.2
GGA1-222	ENST00000489772	FAM84B	Q96KN1	310 aa	Predicted RBP	13.8	□□□□□ -0.2
GGA1-222	ENST00000489772	COPRS	Q9NQ92	184 aa		13.8	□□□□□ -0.2
GGA1-222	ENST00000489772	RCAN3	Q9UKA8	241 aa		13.8	□□□□□ -0.2
GGA1-222	ENST00000489772	TRAF5	O00463	557 aa		13.79	□□□□□ -0.2
GGA1-222	ENST00000489772	IFIT1	P09914	478 aa	Known RBP	13.79	□□□□□ -0.2
GGA1-222	ENST00000489772	IL15	P40933	162 aa	Predicted RBP	13.79	□□□□□ -0.2
GGA1-222	ENST00000489772	ATG9A	Q7Z3C6	839 aa		13.79	□□□□□ -0.2
GGA1-222	ENST00000489772	DCPS	Q96C86	337 aa	Known RBP	13.79	□□□□□ -0.2
GGA1-222	ENST00000489772	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.79	□□□□□ -0.2
GGA1-222	ENST00000489772	CEP126	Q9P2H0	1117 aa		13.79	□□□□□ -0.2
GGA1-222	ENST00000489772	HDAC9	Q9UKV0	1011 aa		13.79	□□□□□ -0.2

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