RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CNTROBQ8N137 903 aa10.27□□□□□ -0.77
VTI1A-207ENST00000489357 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
VTI1A-207ENST00000489357 GBP4Q96PP9 640 aa10.27□□□□□ -0.77
VTI1A-207ENST00000489357 CDHR5Q9HBB8 845 aa10.27□□□□□ -0.77
VTI1A-207ENST00000489357 NUP98P52948 1817 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 POTEB3A0JP26 581 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 APBB1O00213 710 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 HIP1O00291 1037 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 FRAT2O75474 233 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-207ENST00000489357 HSP90AA1P07900 732 aaKnown RBP10.26□□□□□ -0.77
VTI1A-207ENST00000489357 GYS1P13807 737 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 POTEBQ6S5H4 581 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 ANKRD13DQ6ZTN6 518 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 PLBD2Q8NHP8 589 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 PI4K2BQ8TCG2 481 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 RUFY2Q8WXA3 655 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 NARFQ9UHQ1 456 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 ISY1Q9ULR0 285 aaKnown RBP10.26□□□□□ -0.77
VTI1A-207ENST00000489357 BCORQ6W2J9 1755 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 KIF13BQ9NQT8 1826 aa10.26□□□□□ -0.77
VTI1A-207ENST00000489357 NEURL1BA8MQ27 555 aa10.25□□□□□ -0.77
VTI1A-207ENST00000489357 TM4SF1P30408 202 aa10.25□□□□□ -0.77
VTI1A-207ENST00000489357 MCM4P33991 863 aa10.25□□□□□ -0.77
VTI1A-207ENST00000489357 PTGDRQ13258 359 aa10.25□□□□□ -0.77
VTI1A-207ENST00000489357 GCKRQ14397 625 aa10.25□□□□□ -0.77
VTI1A-207ENST00000489357 PROSER3Q2NL68 480 aa10.25□□□□□ -0.77
VTI1A-207ENST00000489357 ECHDC1Q9NTX5 307 aa10.25□□□□□ -0.77
VTI1A-207ENST00000489357 NRXN2Q9P2S2 1712 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 AFDNP55196 1824 aaKnown RBP10.24□□□□□ -0.77
VTI1A-207ENST00000489357 A0A087WZG4 1122 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 TRIM6-TRIM34B2RNG4 842 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 GPR37O15354 613 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 CAMTA2O94983 1202 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 RFC4P35249 363 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 PBX2P40425 430 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 NUCB2P80303 420 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 OS9Q13438 667 aaPredicted RBP10.24□□□□□ -0.77
VTI1A-207ENST00000489357 RAB3GAP1Q15042 981 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 SKOR2Q2VWA4 1001 aaPredicted RBP10.24□□□□□ -0.77
VTI1A-207ENST00000489357 RABL6Q3YEC7 729 aaPredicted RBP10.24□□□□□ -0.77
VTI1A-207ENST00000489357 MSL1Q68DK7 614 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 NLGN1Q8N2Q7 840 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 ARXQ96QS3 562 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 KCNK17Q96T54 332 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 FHDC1Q9C0D6 1143 aaPredicted RBP10.24□□□□□ -0.77
VTI1A-207ENST00000489357 COPRSQ9NQ92 184 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 NPDC1Q9NQX5 325 aaPredicted RBP10.24□□□□□ -0.77
VTI1A-207ENST00000489357 SCN7AQ01118 1682 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 RFX7Q2KHR2 1363 aa10.24□□□□□ -0.77
VTI1A-207ENST00000489357 ARHGAP33O14559 1287 aa10.23□□□□□ -0.77
VTI1A-207ENST00000489357 IGKV5-2P06315 115 aa10.23□□□□□ -0.77
VTI1A-207ENST00000489357 IFIT2P09913 472 aaKnown RBP10.23□□□□□ -0.77
VTI1A-207ENST00000489357 G3BP1Q13283 466 aaKnown RBP eCLIP10.23□□□□□ -0.77
VTI1A-207ENST00000489357 HIC1Q14526 733 aa10.23□□□□□ -0.77
VTI1A-207ENST00000489357 COPS6Q7L5N1 327 aa10.23□□□□□ -0.77
VTI1A-207ENST00000489357 XAGE3Q8WTP9 111 aa10.23□□□□□ -0.77
VTI1A-207ENST00000489357 EVI5LQ96CN4 794 aa10.23□□□□□ -0.77
VTI1A-207ENST00000489357 SRP68Q9UHB9 627 aaKnown RBP10.23□□□□□ -0.77
VTI1A-207ENST00000489357 RAD50Q92878 1312 aa10.23□□□□□ -0.77
VTI1A-207ENST00000489357 PPP1R3GB7ZBB8 358 aa10.22□□□□□ -0.77
VTI1A-207ENST00000489357 GOLGA6L22H0YM25 854 aa10.22□□□□□ -0.77
VTI1A-207ENST00000489357 SGSM2O43147 1006 aa10.22□□□□□ -0.77
VTI1A-207ENST00000489357 ZMYND10O75800 440 aa10.22□□□□□ -0.77
VTI1A-207ENST00000489357 ANXA1P04083 346 aa10.22□□□□□ -0.77
VTI1A-207ENST00000489357 COL9A1P20849 921 aa10.22□□□□□ -0.77
VTI1A-207ENST00000489357 POLD1P28340 1107 aa10.22□□□□□ -0.77
VTI1A-207ENST00000489357 CWF19L2Q2TBE0 894 aaKnown RBP10.22□□□□□ -0.77
VTI1A-207ENST00000489357 CLEC4GQ6UXB4 293 aa10.22□□□□□ -0.77
VTI1A-207ENST00000489357 RILPL2Q969X0 211 aa10.22□□□□□ -0.77
VTI1A-207ENST00000489357 INTS4Q96HW7 963 aaKnown RBP10.22□□□□□ -0.77
VTI1A-207ENST00000489357 SYT17Q9BSW7 474 aa10.22□□□□□ -0.77
VTI1A-207ENST00000489357 BICC1Q9H694 974 aaKnown RBP10.22□□□□□ -0.77
VTI1A-207ENST00000489357 SNRKQ9NRH2 765 aa10.22□□□□□ -0.77
VTI1A-207ENST00000489357 ERVV-1B6SEH8 477 aa10.21□□□□□ -0.77
VTI1A-207ENST00000489357 PDIA4P13667 645 aaKnown RBP10.21□□□□□ -0.77
VTI1A-207ENST00000489357 PRKCSHP14314 528 aaPredicted RBP10.21□□□□□ -0.77
VTI1A-207ENST00000489357 HSPA4P34932 840 aa10.21□□□□□ -0.77
VTI1A-207ENST00000489357 PIP4K2AP48426 406 aaPredicted RBP10.21□□□□□ -0.77
VTI1A-207ENST00000489357 PSEN2P49810 448 aa10.21□□□□□ -0.77
VTI1A-207ENST00000489357 USPL1Q5W0Q7 1092 aa10.21□□□□□ -0.77
VTI1A-207ENST00000489357 POTEEQ6S8J3 1075 aa10.21□□□□□ -0.77
VTI1A-207ENST00000489357 KIAA1211Q6ZU35 1233 aa10.21□□□□□ -0.77
VTI1A-207ENST00000489357 CCDC191Q8NCU4 936 aa10.21□□□□□ -0.77
VTI1A-207ENST00000489357 KAZALD1Q96I82 304 aa10.21□□□□□ -0.77
VTI1A-207ENST00000489357 SUCLG2Q96I99 432 aa10.21□□□□□ -0.77
VTI1A-207ENST00000489357 IL1RAPL2Q9NP60 686 aa10.21□□□□□ -0.77
VTI1A-207ENST00000489357 KIAA1551Q9HCM1 1747 aa10.21□□□□□ -0.78
VTI1A-207ENST00000489357 POLRMTO00411 1230 aaKnown RBP10.2□□□□□ -0.78
VTI1A-207ENST00000489357 ZPR1O75312 459 aa10.2□□□□□ -0.78
VTI1A-207ENST00000489357 MYL6BP14649 208 aa10.2□□□□□ -0.78
VTI1A-207ENST00000489357 DDR1Q08345 913 aa10.2□□□□□ -0.78
VTI1A-207ENST00000489357 AIMP1Q12904 312 aaKnown RBP10.2□□□□□ -0.78
VTI1A-207ENST00000489357 NFIXQ14938 502 aa10.2□□□□□ -0.78
VTI1A-207ENST00000489357 DZIP3Q86Y13 1208 aaKnown RBP10.2□□□□□ -0.78
VTI1A-207ENST00000489357 MYD88Q99836 296 aa10.2□□□□□ -0.78
VTI1A-207ENST00000489357 GPR108Q9NPR9 543 aa10.2□□□□□ -0.78
VTI1A-207ENST00000489357 ANO2Q9NQ90 1003 aa10.2□□□□□ -0.78
VTI1A-207ENST00000489357 TBC1D2BQ9UPU7 963 aa10.2□□□□□ -0.78
VTI1A-207ENST00000489357 SPEF2Q9C093 1822 aa10.19□□□□□ -0.78
VTI1A-207ENST00000489357 MAP3K15Q6ZN16 1313 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms