RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 XAGE2Q96GT9 111 aa8.48□□□□□ -1.05
PDCD4-209ENST00000489049 ZSCAN10Q96SZ4 725 aaPredicted RBP8.48□□□□□ -1.05
PDCD4-209ENST00000489049 NSFL1CQ9UNZ2 370 aaKnown RBP8.48□□□□□ -1.05
PDCD4-209ENST00000489049 CNTNAP5Q8WYK1 1306 aa8.48□□□□□ -1.05
PDCD4-209ENST00000489049 FANCIQ9NVI1 1328 aa8.48□□□□□ -1.05
PDCD4-209ENST00000489049 NCOA3Q9Y6Q9 1424 aa8.47□□□□□ -1.05
PDCD4-209ENST00000489049 PHF20L1A8MW92 1017 aa8.47□□□□□ -1.05
PDCD4-209ENST00000489049 GNAI1P63096 354 aa8.47□□□□□ -1.05
PDCD4-209ENST00000489049 NEDD1Q8NHV4 660 aa8.47□□□□□ -1.05
PDCD4-209ENST00000489049 CRBNQ96SW2 442 aa8.47□□□□□ -1.05
PDCD4-209ENST00000489049 FHDC1Q9C0D6 1143 aaPredicted RBP8.47□□□□□ -1.05
PDCD4-209ENST00000489049 GPAMQ9HCL2 828 aa8.47□□□□□ -1.05
PDCD4-209ENST00000489049 LRRC4BQ9NT99 713 aa8.47□□□□□ -1.05
PDCD4-209ENST00000489049 IFT57Q9NWB7 429 aa8.47□□□□□ -1.05
PDCD4-209ENST00000489049 TBC1D2BQ9UPU7 963 aa8.47□□□□□ -1.05
PDCD4-209ENST00000489049 RBM19Q9Y4C8 960 aaKnown RBP8.47□□□□□ -1.05
PDCD4-209ENST00000489049 NPHP4O75161 1426 aaPredicted RBP8.46□□□□□ -1.05
PDCD4-209ENST00000489049 MAP2P11137 1827 aaKnown RBP8.46□□□□□ -1.06
PDCD4-209ENST00000489049 A0A1B0GTH6 734 aa8.46□□□□□ -1.06
PDCD4-209ENST00000489049 CANXP27824 592 aaKnown RBP8.46□□□□□ -1.06
PDCD4-209ENST00000489049 PRKAR2BP31323 418 aa8.46□□□□□ -1.06
PDCD4-209ENST00000489049 PHKA2P46019 1235 aa8.46□□□□□ -1.06
PDCD4-209ENST00000489049 CFHR5Q9BXR6 569 aa8.46□□□□□ -1.06
PDCD4-209ENST00000489049 NRKQ7Z2Y5 1582 aa8.46□□□□□ -1.06
PDCD4-209ENST00000489049 KIF16BQ96L93 1317 aa8.46□□□□□ -1.06
PDCD4-209ENST00000489049 SBNO1A3KN83 1393 aa8.46□□□□□ -1.06
PDCD4-209ENST00000489049 ARHGEF10O15013 1369 aa8.46□□□□□ -1.06
PDCD4-209ENST00000489049 ADGRL3Q9HAR2 1447 aa8.46□□□□□ -1.06
PDCD4-209ENST00000489049 CHD2O14647 1828 aaKnown RBP8.45□□□□□ -1.06
PDCD4-209ENST00000489049 PPM1GO15355 546 aaPredicted RBP8.45□□□□□ -1.06
PDCD4-209ENST00000489049 HTATSF1O43719 755 aaKnown RBP8.45□□□□□ -1.06
PDCD4-209ENST00000489049 PODNQ7Z5L7 613 aa8.45□□□□□ -1.06
PDCD4-209ENST00000489049 BEND7Q8N7W2 519 aaPredicted RBP8.45□□□□□ -1.06
PDCD4-209ENST00000489049 PMFBP1Q8TBY8 1022 aa8.45□□□□□ -1.06
PDCD4-209ENST00000489049 ARHGAP45Q92619 1136 aa8.45□□□□□ -1.06
PDCD4-209ENST00000489049 CHMP4AQ9BY43 222 aa8.45□□□□□ -1.06
PDCD4-209ENST00000489049 NALCNQ8IZF0 1738 aa8.45□□□□□ -1.06
PDCD4-209ENST00000489049 FMN2Q9NZ56 1722 aa8.45□□□□□ -1.06
PDCD4-209ENST00000489049 FLT4P35916 1363 aa8.45□□□□□ -1.06
PDCD4-209ENST00000489049 USP54Q70EL1 1684 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 OIP5O43482 229 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 PLIN1O60240 522 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 GTF2E1P29083 439 aaPredicted RBP8.44□□□□□ -1.06
PDCD4-209ENST00000489049 MAP2K3P46734 347 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 TSGA10IPQ3SY00 556 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 C4orf17Q53FE4 359 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 ESCO1Q5FWF5 840 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 GNASQ5JWF2 1037 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 ZKSCAN2Q63HK3 967 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 TMEM214Q6NUQ4 689 aaKnown RBP8.44□□□□□ -1.06
PDCD4-209ENST00000489049 PHTF2Q8N3S3 785 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 OXCT2Q9BYC2 517 aaPredicted RBP8.44□□□□□ -1.06
PDCD4-209ENST00000489049 DOLKQ9UPQ8 538 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 RRP7AQ9Y3A4 280 aaKnown RBP8.44□□□□□ -1.06
PDCD4-209ENST00000489049 SOS1Q07889 1333 aaPredicted RBP8.44□□□□□ -1.06
PDCD4-209ENST00000489049 RTL1A6NKG5 1358 aa8.44□□□□□ -1.06
PDCD4-209ENST00000489049 ZNF853P0CG23 659 aa8.43□□□□□ -1.06
PDCD4-209ENST00000489049 IRF5Q13568 498 aa8.43□□□□□ -1.06
PDCD4-209ENST00000489049 UBAP2LQ14157 1087 aaKnown RBP8.43□□□□□ -1.06
PDCD4-209ENST00000489049 LBRQ14739 615 aaKnown RBP8.43□□□□□ -1.06
PDCD4-209ENST00000489049 KCNH5Q8NCM2 988 aa8.43□□□□□ -1.06
PDCD4-209ENST00000489049 DCAF5Q96JK2 942 aa8.43□□□□□ -1.06
PDCD4-209ENST00000489049 ETNK1Q9HBU6 452 aa8.43□□□□□ -1.06
PDCD4-209ENST00000489049 BABAM1Q9NWV8 329 aa8.43□□□□□ -1.06
PDCD4-209ENST00000489049 KDM2BQ8NHM5 1336 aa8.43□□□□□ -1.06
PDCD4-209ENST00000489049 BCAR3O75815 825 aa8.42□□□□□ -1.06
PDCD4-209ENST00000489049 USP4Q13107 963 aa8.42□□□□□ -1.06
PDCD4-209ENST00000489049 EIF4A2Q14240 407 aaKnown RBP8.42□□□□□ -1.06
PDCD4-209ENST00000489049 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
PDCD4-209ENST00000489049 DZIP1LQ8IYY4 767 aaKnown RBP8.42□□□□□ -1.06
PDCD4-209ENST00000489049 CLUAP1Q96AJ1 413 aa8.42□□□□□ -1.06
PDCD4-209ENST00000489049 PRM3Q9NNZ6 103 aa8.42□□□□□ -1.06
PDCD4-209ENST00000489049 PHF24Q9UPV7 400 aa8.42□□□□□ -1.06
PDCD4-209ENST00000489049 NWD1Q149M9 1564 aa8.42□□□□□ -1.06
PDCD4-209ENST00000489049 DCCP43146 1447 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 MST1RQ04912 1400 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 KDRP35968 1356 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 STAU1O95793 577 aaKnown RBP8.41□□□□□ -1.06
PDCD4-209ENST00000489049 AMPHP49418 695 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 EXOSC9Q06265 439 aaKnown RBP8.41□□□□□ -1.06
PDCD4-209ENST00000489049 PLA2G4EQ3MJ16 856 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 RNF135Q8IUD6 432 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 GAS2L2Q8NHY3 880 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 RHBDD1Q8TEB9 315 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 ARXQ96QS3 562 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 RWDD1Q9H446 243 aaPredicted RBP8.41□□□□□ -1.06
PDCD4-209ENST00000489049 C19orf44Q9H6X5 657 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 RUBCNLQ9H714 662 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 SMC4Q9NTJ3 1288 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 DDX19BQ9UMR2 479 aa8.41□□□□□ -1.06
PDCD4-209ENST00000489049 KIAA0232Q92628 1395 aa8.4□□□□□ -1.06
PDCD4-209ENST00000489049 PLEKHG2Q9H7P9 1386 aa8.4□□□□□ -1.06
PDCD4-209ENST00000489049 MAP3K19Q56UN5 1328 aa8.4□□□□□ -1.06
PDCD4-209ENST00000489049 CSB-PGBD3P0DP91 1061 aa8.4□□□□□ -1.06
PDCD4-209ENST00000489049 MSX1P28360 303 aa8.4□□□□□ -1.06
PDCD4-209ENST00000489049 MCM6Q14566 821 aa8.4□□□□□ -1.06
PDCD4-209ENST00000489049 RRS1Q15050 365 aaKnown RBP8.4□□□□□ -1.06
PDCD4-209ENST00000489049 C20orf194Q5TEA3 1177 aa8.4□□□□□ -1.06
PDCD4-209ENST00000489049 ATF7IPQ6VMQ6 1270 aa8.4□□□□□ -1.06
PDCD4-209ENST00000489049 FTSJ3Q8IY81 847 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms