RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 HNRNPUQ00839 825 aaKnown RBP eCLIP21.98■■□□□ 1.11
ATG3-205ENST00000488910 TBC1D10BQ4KMP7 808 aaPredicted RBP21.98■■□□□ 1.11
ATG3-205ENST00000488910 STRIP1Q5VSL9 837 aa21.98■■□□□ 1.11
ATG3-205ENST00000488910 CDC37L1Q7L3B6 337 aa21.98■■□□□ 1.11
ATG3-205ENST00000488910 HELBQ8NG08 1087 aaPredicted RBP21.98■■□□□ 1.11
ATG3-205ENST00000488910 ARHGAP45Q92619 1136 aa21.98■■□□□ 1.11
ATG3-205ENST00000488910 GMLQ99445 158 aa21.98■■□□□ 1.11
ATG3-205ENST00000488910 ZNF280AP59817 542 aaPredicted RBP21.97■■□□□ 1.11
ATG3-205ENST00000488910 MKRN1Q9UHC7 482 aaKnown RBP21.97■■□□□ 1.11
ATG3-205ENST00000488910 CNTNAP1P78357 1384 aa21.97■■□□□ 1.11
ATG3-205ENST00000488910 USP17L8P0C7I0 530 aa21.96■■□□□ 1.11
ATG3-205ENST00000488910 MMP14P50281 582 aa21.96■■□□□ 1.11
ATG3-205ENST00000488910 RBM26Q5T8P6 1007 aaKnown RBP21.96■■□□□ 1.11
ATG3-205ENST00000488910 ANKRD44Q8N8A2 993 aa21.96■■□□□ 1.11
ATG3-205ENST00000488910 PCNTO95613 3336 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 TRPM7Q96QT4 1865 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 TRAF5O00463 557 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 EGFRP00533 1210 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 KLRK1P26718 216 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 KIF4BQ2VIQ3 1234 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 DEFB115Q30KQ5 88 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 DACT2Q5SW24 774 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 TTLL5Q6EMB2 1281 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 GLIS2Q9BZE0 524 aaPredicted RBP21.95■■□□□ 1.1
ATG3-205ENST00000488910 CD209Q9NNX6 404 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 HDAC5Q9UQL6 1122 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 MYO3BQ8WXR4 1341 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 KIF16BQ96L93 1317 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 IRS2Q9Y4H2 1338 aa21.95■■□□□ 1.1
ATG3-205ENST00000488910 SNAP23O00161 211 aa21.94■■□□□ 1.1
ATG3-205ENST00000488910 PLIN1O60240 522 aa21.94■■□□□ 1.1
ATG3-205ENST00000488910 FMR1Q06787 632 aaKnown RBP eCLIP21.94■■□□□ 1.1
ATG3-205ENST00000488910 CST9Q5W186 159 aa21.94■■□□□ 1.1
ATG3-205ENST00000488910 DCPSQ96C86 337 aaKnown RBP21.94■■□□□ 1.1
ATG3-205ENST00000488910 ABT1Q9ULW3 272 aaKnown RBP21.94■■□□□ 1.1
ATG3-205ENST00000488910 RIPOR2Q9Y4F9 1068 aa21.94■■□□□ 1.1
ATG3-205ENST00000488910 RASSF10A6NK89 507 aa21.93■■□□□ 1.1
ATG3-205ENST00000488910 IPO8O15397 1037 aaKnown RBP21.93■■□□□ 1.1
ATG3-205ENST00000488910 UBE4AQ14139 1066 aa21.93■■□□□ 1.1
ATG3-205ENST00000488910 MROH5Q6ZUA9 1318 aa21.93■■□□□ 1.1
ATG3-205ENST00000488910 ZNF804AQ7Z570 1209 aa21.93■■□□□ 1.1
ATG3-205ENST00000488910 FBXW7Q969H0 707 aa21.93■■□□□ 1.1
ATG3-205ENST00000488910 USP48Q86UV5 1035 aa21.92■■□□□ 1.1
ATG3-205ENST00000488910 OGFOD1Q8N543 542 aa21.92■■□□□ 1.1
ATG3-205ENST00000488910 PUS3Q9BZE2 481 aaKnown RBP21.92■■□□□ 1.1
ATG3-205ENST00000488910 MYOZ2Q9NPC6 264 aa21.92■■□□□ 1.1
ATG3-205ENST00000488910 POLR2AP24928 1970 aaKnown RBP21.91■■□□□ 1.1
ATG3-205ENST00000488910 CELF2O95319 508 aaKnown RBP21.91■■□□□ 1.1
ATG3-205ENST00000488910 UBTFL1P0CB47 393 aaPredicted RBP21.91■■□□□ 1.1
ATG3-205ENST00000488910 IL1R1P14778 569 aa21.91■■□□□ 1.1
ATG3-205ENST00000488910 GTF2IP78347 998 aa21.91■■□□□ 1.1
ATG3-205ENST00000488910 KRT26Q7Z3Y9 468 aa21.91■■□□□ 1.1
ATG3-205ENST00000488910 A0A1B0GUL6 1792 aa21.91■■□□□ 1.1
ATG3-205ENST00000488910 VEGFBP49765 207 aa21.9■■□□□ 1.1
ATG3-205ENST00000488910 SCARF1Q14162 830 aa21.9■■□□□ 1.1
ATG3-205ENST00000488910 INTS3Q68E01 1043 aaKnown RBP21.9■■□□□ 1.1
ATG3-205ENST00000488910 MXD3Q9BW11 206 aa21.89■■□□□ 1.09
ATG3-205ENST00000488910 TLL2Q9Y6L7 1015 aa21.89■■□□□ 1.09
ATG3-205ENST00000488910 LRRC24Q50LG9 513 aa21.88■■□□□ 1.09
ATG3-205ENST00000488910 SULF1Q8IWU6 871 aa21.88■■□□□ 1.09
ATG3-205ENST00000488910 ZBED9Q6R2W3 1325 aa21.87■■□□□ 1.09
ATG3-205ENST00000488910 BCAR3O75815 825 aa21.87■■□□□ 1.09
ATG3-205ENST00000488910 FKBP1AP62942 108 aaKnown RBP21.87■■□□□ 1.09
ATG3-205ENST00000488910 METTL24Q5JXM2 366 aa21.87■■□□□ 1.09
ATG3-205ENST00000488910 GGA3Q9NZ52 723 aa21.87■■□□□ 1.09
ATG3-205ENST00000488910 HDAC9Q9UKV0 1011 aa21.87■■□□□ 1.09
ATG3-205ENST00000488910 ZNF646O15015 1829 aaPredicted RBP21.87■■□□□ 1.09
ATG3-205ENST00000488910 PITPNM2Q9BZ72 1349 aa21.86■■□□□ 1.09
ATG3-205ENST00000488910 SASH1O94885 1247 aa21.86■■□□□ 1.09
ATG3-205ENST00000488910 PDE8BO95263 885 aa21.86■■□□□ 1.09
ATG3-205ENST00000488910 HIBADHP31937 336 aaKnown RBP21.86■■□□□ 1.09
ATG3-205ENST00000488910 ECE1P42892 770 aa21.86■■□□□ 1.09
ATG3-205ENST00000488910 RFX5P48382 616 aaPredicted RBP21.86■■□□□ 1.09
ATG3-205ENST00000488910 ATF7IPQ6VMQ6 1270 aa21.86■■□□□ 1.09
ATG3-205ENST00000488910 SAPCD2Q86UD0 394 aa21.86■■□□□ 1.09
ATG3-205ENST00000488910 HHIPL1Q96JK4 782 aa21.86■■□□□ 1.09
ATG3-205ENST00000488910 ZNF408Q9H9D4 720 aa21.86■■□□□ 1.09
ATG3-205ENST00000488910 WDR33Q9C0J8 1336 aaKnown RBP21.85■■□□□ 1.09
ATG3-205ENST00000488910 GNAI3P08754 354 aa21.85■■□□□ 1.09
ATG3-205ENST00000488910 ANGEL2Q5VTE6 544 aaKnown RBP21.85■■□□□ 1.09
ATG3-205ENST00000488910 KLHDC4Q8TBB5 520 aa21.85■■□□□ 1.09
ATG3-205ENST00000488910 FRAT1Q92837 279 aaPredicted RBP21.85■■□□□ 1.09
ATG3-205ENST00000488910 FAM84BQ96KN1 310 aaPredicted RBP21.85■■□□□ 1.09
ATG3-205ENST00000488910 FBXO3Q9UK99 471 aa21.85■■□□□ 1.09
ATG3-205ENST00000488910 ASTN2O75129 1339 aaPredicted RBP21.84■■□□□ 1.09
ATG3-205ENST00000488910 ADM5C9JUS6 153 aa21.84■■□□□ 1.09
ATG3-205ENST00000488910 EYA2O00167 538 aa21.84■■□□□ 1.09
ATG3-205ENST00000488910 HSPA1AP0DMV8 641 aaKnown RBP21.84■■□□□ 1.09
ATG3-205ENST00000488910 HSPA1BP0DMV9 641 aaKnown RBP21.84■■□□□ 1.09
ATG3-205ENST00000488910 TRIM27P14373 513 aa21.84■■□□□ 1.09
ATG3-205ENST00000488910 PTPN12Q05209 780 aaKnown RBP21.84■■□□□ 1.09
ATG3-205ENST00000488910 KIAA0825Q8IV33 1275 aa21.84■■□□□ 1.09
ATG3-205ENST00000488910 VGLL2Q8N8G2 317 aa21.84■■□□□ 1.09
ATG3-205ENST00000488910 TDRD7Q8NHU6 1098 aaKnown RBP21.84■■□□□ 1.09
ATG3-205ENST00000488910 LRRFIP2Q9Y608 721 aaKnown RBP21.84■■□□□ 1.09
ATG3-205ENST00000488910 FAM205AQ6ZU69 1335 aa21.83■■□□□ 1.09
ATG3-205ENST00000488910 WNT10BO00744 389 aa21.83■■□□□ 1.09
ATG3-205ENST00000488910 GYG1P46976 350 aa21.83■■□□□ 1.09
ATG3-205ENST00000488910 CAPNS2Q96L46 248 aa21.83■■□□□ 1.09
ATG3-205ENST00000488910 MEIS3Q99687 375 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms