RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 SF3B3Q15393 1217 aaKnown RBP21.97■■□□□ 1.11
COL16A1-215ENST00000488897 COL11A2P13942 1736 aaPredicted RBP21.96■■□□□ 1.11
COL16A1-215ENST00000488897 H0YIN7 160 aa21.96■■□□□ 1.11
COL16A1-215ENST00000488897 BRD1O95696 1058 aa21.96■■□□□ 1.11
COL16A1-215ENST00000488897 MBD3O95983 291 aa21.96■■□□□ 1.11
COL16A1-215ENST00000488897 CRY2Q49AN0 593 aa21.96■■□□□ 1.11
COL16A1-215ENST00000488897 TAF7LQ5H9L4 462 aa21.96■■□□□ 1.11
COL16A1-215ENST00000488897 PALD1Q9ULE6 856 aa21.96■■□□□ 1.11
COL16A1-215ENST00000488897 PDE6BP35913 854 aa21.96■■□□□ 1.11
COL16A1-215ENST00000488897 DDX46Q7L014 1031 aaKnown RBP21.96■■□□□ 1.11
COL16A1-215ENST00000488897 ZSCAN30Q86W11 494 aa21.96■■□□□ 1.11
COL16A1-215ENST00000488897 GPR101Q96P66 508 aaPredicted RBP21.96■■□□□ 1.11
COL16A1-215ENST00000488897 C10orf71Q711Q0 1435 aa21.95■■□□□ 1.11
COL16A1-215ENST00000488897 HS1BP3Q53T59 392 aa21.95■■□□□ 1.1
COL16A1-215ENST00000488897 SYT17Q9BSW7 474 aa21.95■■□□□ 1.1
COL16A1-215ENST00000488897 MYH3P11055 1940 aa21.95■■□□□ 1.1
COL16A1-215ENST00000488897 CACNA1SQ13698 1873 aa21.95■■□□□ 1.1
COL16A1-215ENST00000488897 ANKRD18BA2A2Z9 1011 aa21.95■■□□□ 1.1
COL16A1-215ENST00000488897 LDHAL6AQ6ZMR3 332 aa21.94■■□□□ 1.1
COL16A1-215ENST00000488897 IL1RAPL2Q9NP60 686 aa21.94■■□□□ 1.1
COL16A1-215ENST00000488897 SPEF2Q9C093 1822 aa21.94■■□□□ 1.1
COL16A1-215ENST00000488897 POLA2Q14181 598 aa21.94■■□□□ 1.1
COL16A1-215ENST00000488897 RBSNQ9H1K0 784 aa21.94■■□□□ 1.1
COL16A1-215ENST00000488897 KLRG2A4D1S0 409 aaPredicted RBP21.93■■□□□ 1.1
COL16A1-215ENST00000488897 LRSAM1Q6UWE0 723 aa21.92■■□□□ 1.1
COL16A1-215ENST00000488897 C21orf2O43822 256 aa21.92■■□□□ 1.1
COL16A1-215ENST00000488897 RPS8P62241 208 aaKnown RBP21.92■■□□□ 1.1
COL16A1-215ENST00000488897 CNNM1Q9NRU3 951 aa21.92■■□□□ 1.1
COL16A1-215ENST00000488897 RBM27Q9P2N5 1060 aaKnown RBP21.92■■□□□ 1.1
COL16A1-215ENST00000488897 MTX1Q13505 466 aa21.91■■□□□ 1.1
COL16A1-215ENST00000488897 PRPF40BQ6NWY9 871 aaKnown RBP21.91■■□□□ 1.1
COL16A1-215ENST00000488897 MASTLQ96GX5 879 aa21.91■■□□□ 1.1
COL16A1-215ENST00000488897 ATG9AQ7Z3C6 839 aa21.91■■□□□ 1.1
COL16A1-215ENST00000488897 MPHOSPH8Q99549 860 aa21.91■■□□□ 1.1
COL16A1-215ENST00000488897 BCS1LQ9Y276 419 aa21.91■■□□□ 1.1
COL16A1-215ENST00000488897 MSNP26038 577 aaKnown RBP21.9■■□□□ 1.1
COL16A1-215ENST00000488897 HSPA4P34932 840 aa21.9■■□□□ 1.1
COL16A1-215ENST00000488897 OS9Q13438 667 aaPredicted RBP21.9■■□□□ 1.1
COL16A1-215ENST00000488897 ANKRD18AQ8IVF6 992 aa21.9■■□□□ 1.1
COL16A1-215ENST00000488897 RBM17Q96I25 401 aaKnown RBP21.9■■□□□ 1.1
COL16A1-215ENST00000488897 TMEM63CQ9P1W3 806 aa21.9■■□□□ 1.1
COL16A1-215ENST00000488897 SLX4Q8IY92 1834 aa21.9■■□□□ 1.1
COL16A1-215ENST00000488897 RHPN1Q8TCX5 695 aa21.9■■□□□ 1.1
COL16A1-215ENST00000488897 KIF1BPQ96EK5 621 aa21.9■■□□□ 1.1
COL16A1-215ENST00000488897 PDLIM2Q96JY6 352 aa21.9■■□□□ 1.1
COL16A1-215ENST00000488897 SASH1O94885 1247 aa21.89■■□□□ 1.1
COL16A1-215ENST00000488897 NPR1P16066 1061 aa21.89■■□□□ 1.1
COL16A1-215ENST00000488897 GRAPQ13588 217 aa21.89■■□□□ 1.1
COL16A1-215ENST00000488897 FOXD4L5Q5VV16 416 aaPredicted RBP21.89■■□□□ 1.1
COL16A1-215ENST00000488897 GRAPLQ8TC17 118 aaPredicted RBP21.89■■□□□ 1.1
COL16A1-215ENST00000488897 FOXD4L4Q8WXT5 416 aaPredicted RBP21.89■■□□□ 1.1
COL16A1-215ENST00000488897 TFCP2Q12800 502 aa21.89■■□□□ 1.09
COL16A1-215ENST00000488897 KLRK1P26718 216 aa21.88■■□□□ 1.09
COL16A1-215ENST00000488897 HSP90AB4PQ58FF6 505 aa21.88■■□□□ 1.09
COL16A1-215ENST00000488897 IGHMBP2P38935 993 aaKnown RBP21.87■■□□□ 1.09
COL16A1-215ENST00000488897 MINPP1Q9UNW1 487 aa21.87■■□□□ 1.09
COL16A1-215ENST00000488897 NSFL1CQ9UNZ2 370 aaKnown RBP21.87■■□□□ 1.09
COL16A1-215ENST00000488897 HOXA10P31260 410 aaPredicted RBP21.87■■□□□ 1.09
COL16A1-215ENST00000488897 NOL8Q76FK4 1167 aaKnown RBP21.87■■□□□ 1.09
COL16A1-215ENST00000488897 PI4K2BQ8TCG2 481 aa21.87■■□□□ 1.09
COL16A1-215ENST00000488897 SYAP1Q96A49 352 aaPredicted RBP21.87■■□□□ 1.09
COL16A1-215ENST00000488897 CHAMP1Q96JM3 812 aa21.87■■□□□ 1.09
COL16A1-215ENST00000488897 UPF3BQ9BZI7 483 aaKnown RBP21.87■■□□□ 1.09
COL16A1-215ENST00000488897 RIPOR2Q9Y4F9 1068 aa21.87■■□□□ 1.09
COL16A1-215ENST00000488897 CD2APQ9Y5K6 639 aa21.87■■□□□ 1.09
COL16A1-215ENST00000488897 SYCE3A1L190 88 aa21.86■■□□□ 1.09
COL16A1-215ENST00000488897 PPEF1O14829 653 aaPredicted RBP21.86■■□□□ 1.09
COL16A1-215ENST00000488897 TIMM10P62072 90 aa21.86■■□□□ 1.09
COL16A1-215ENST00000488897 CHRNDQ07001 517 aa21.86■■□□□ 1.09
COL16A1-215ENST00000488897 CNTROBQ8N137 903 aa21.86■■□□□ 1.09
COL16A1-215ENST00000488897 EYA2O00167 538 aa21.86■■□□□ 1.09
COL16A1-215ENST00000488897 G3BP1Q13283 466 aaKnown RBP eCLIP21.86■■□□□ 1.09
COL16A1-215ENST00000488897 CDC5LQ99459 802 aaKnown RBP21.86■■□□□ 1.09
COL16A1-215ENST00000488897 COPRSQ9NQ92 184 aa21.86■■□□□ 1.09
COL16A1-215ENST00000488897 WDR33Q9C0J8 1336 aaKnown RBP21.86■■□□□ 1.09
COL16A1-215ENST00000488897 SGSM2O43147 1006 aa21.85■■□□□ 1.09
COL16A1-215ENST00000488897 TTLL6Q8N841 843 aa21.85■■□□□ 1.09
COL16A1-215ENST00000488897 PIM2Q9P1W9 311 aa21.85■■□□□ 1.09
COL16A1-215ENST00000488897 HDAC5Q9UQL6 1122 aa21.85■■□□□ 1.09
COL16A1-215ENST00000488897 RAD50Q92878 1312 aa21.85■■□□□ 1.09
COL16A1-215ENST00000488897 TGFB2P61812 414 aa21.85■■□□□ 1.09
COL16A1-215ENST00000488897 GPSM2P81274 684 aa21.85■■□□□ 1.09
COL16A1-215ENST00000488897 METTL24Q5JXM2 366 aa21.85■■□□□ 1.09
COL16A1-215ENST00000488897 HSP90B1P14625 803 aaKnown RBP21.84■■□□□ 1.09
COL16A1-215ENST00000488897 TLR7Q9NYK1 1049 aaKnown RBP21.84■■□□□ 1.09
COL16A1-215ENST00000488897 ANKIB1Q9P2G1 1089 aa21.84■■□□□ 1.09
COL16A1-215ENST00000488897 NOL7Q9UMY1 257 aaKnown RBP21.84■■□□□ 1.09
COL16A1-215ENST00000488897 KIAA1551Q9HCM1 1747 aa21.84■■□□□ 1.09
COL16A1-215ENST00000488897 TPM2P07951 284 aa21.84■■□□□ 1.09
COL16A1-215ENST00000488897 TXNRD3Q86VQ6 643 aa21.84■■□□□ 1.09
COL16A1-215ENST00000488897 CRAMP1Q96RY5 1269 aa21.84■■□□□ 1.09
COL16A1-215ENST00000488897 CCDC8Q9H0W5 538 aaPredicted RBP21.84■■□□□ 1.09
COL16A1-215ENST00000488897 IL25Q9H293 177 aa21.84■■□□□ 1.09
COL16A1-215ENST00000488897 BSDC1Q9NW68 430 aaPredicted RBP21.83■■□□□ 1.09
COL16A1-215ENST00000488897 ALDH1B1P30837 517 aa21.82■■□□□ 1.08
COL16A1-215ENST00000488897 YBX3P16989 372 aaKnown RBP eCLIP21.82■■□□□ 1.08
COL16A1-215ENST00000488897 STYK1Q6J9G0 422 aa21.82■■□□□ 1.08
COL16A1-215ENST00000488897 KIAA1211Q6ZU35 1233 aa21.82■■□□□ 1.08
COL16A1-215ENST00000488897 KIF13BQ9NQT8 1826 aa21.82■■□□□ 1.08
COL16A1-215ENST00000488897 RIMBP2O15034 1052 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms