RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	ZC3H4	Q9UPT8	1303 aa	Known RBP	12	□□□□□ -0.49
PTBP3-208	ENST00000487997	BCAR3	O75815	825 aa		11.99	□□□□□ -0.49
PTBP3-208	ENST00000487997	DPP8	Q6V1X1	898 aa	Predicted RBP	11.99	□□□□□ -0.49
PTBP3-208	ENST00000487997	CELF1	Q92879	486 aa	Known RBP	11.99	□□□□□ -0.49
PTBP3-208	ENST00000487997	PSMD1	Q99460	953 aa		11.99	□□□□□ -0.49
PTBP3-208	ENST00000487997	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.99	□□□□□ -0.49
PTBP3-208	ENST00000487997	SEC31B	Q9NQW1	1179 aa		11.99	□□□□□ -0.49
PTBP3-208	ENST00000487997	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.99	□□□□□ -0.49
PTBP3-208	ENST00000487997	KDM2B	Q8NHM5	1336 aa		11.98	□□□□□ -0.49
PTBP3-208	ENST00000487997	IGHMBP2	P38935	993 aa	Known RBP	11.98	□□□□□ -0.49
PTBP3-208	ENST00000487997	IARS	P41252	1262 aa	Known RBP	11.98	□□□□□ -0.49
PTBP3-208	ENST00000487997	CASP7	P55210	303 aa		11.98	□□□□□ -0.49
PTBP3-208	ENST00000487997	MMRN1	Q13201	1228 aa		11.98	□□□□□ -0.49
PTBP3-208	ENST00000487997	JDP2	Q8WYK2	163 aa		11.98	□□□□□ -0.49
PTBP3-208	ENST00000487997	GREM2	Q9H772	168 aa		11.98	□□□□□ -0.49
PTBP3-208	ENST00000487997	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.98	□□□□□ -0.49
PTBP3-208	ENST00000487997	HDAC5	Q9UQL6	1122 aa		11.98	□□□□□ -0.49
PTBP3-208	ENST00000487997	RTL9	Q8NET4	1388 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	ANKRD18B	A2A2Z9	1011 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	GTPBP6	O43824	516 aa	Predicted RBP	11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	ITGA6	P23229	1130 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	IFIT5	Q13325	482 aa	Known RBP	11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	CCDC57	Q2TAC2	916 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	TAF7L	Q5H9L4	462 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	ZKSCAN2	Q63HK3	967 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	ATF7IP	Q6VMQ6	1270 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	LARGE2	Q8N3Y3	721 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	YTHDC1	Q96MU7	727 aa	Known RBP	11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	MPHOSPH8	Q99549	860 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	VPS33B	Q9H267	617 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	GPHN	Q9NQX3	736 aa	Predicted RBP	11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	ANKIB1	Q9P2G1	1089 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	PCDHGA4	Q9Y5G9	962 aa		11.97	□□□□□ -0.49
PTBP3-208	ENST00000487997	UTY	O14607	1347 aa		11.96	□□□□□ -0.49
PTBP3-208	ENST00000487997	C6orf229	H3BNL8	230 aa		11.96	□□□□□ -0.49
PTBP3-208	ENST00000487997	PPIP5K2	O43314	1243 aa		11.96	□□□□□ -0.49
PTBP3-208	ENST00000487997	CSF1R	P07333	972 aa		11.96	□□□□□ -0.49
PTBP3-208	ENST00000487997	NUDT7	P0C024	238 aa		11.96	□□□□□ -0.49
PTBP3-208	ENST00000487997	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.96	□□□□□ -0.49
PTBP3-208	ENST00000487997	PRELP	P51888	382 aa		11.96	□□□□□ -0.49
PTBP3-208	ENST00000487997	FOXO4	P98177	505 aa		11.96	□□□□□ -0.49
PTBP3-208	ENST00000487997	FAM161A	Q3B820	660 aa		11.96	□□□□□ -0.49
PTBP3-208	ENST00000487997	LMBR1L	Q6UX01	489 aa		11.96	□□□□□ -0.49
PTBP3-208	ENST00000487997	RYDEN	Q9NUL5	291 aa	Known RBP	11.96	□□□□□ -0.49
PTBP3-208	ENST00000487997		A0A1B0GUL6	1792 aa		11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	COL4A1	P02462	1669 aa		11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	UBTFL1	P0CB47	393 aa	Predicted RBP	11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	FOXK1	P85037	733 aa		11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	DSG2	Q14126	1118 aa		11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	FTSJ3	Q8IY81	847 aa	Known RBP	11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	NIM1K	Q8IY84	436 aa		11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	CLUAP1	Q96AJ1	413 aa		11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	SUCLG2	Q96I99	432 aa		11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	EYA3	Q99504	573 aa		11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	USP44	Q9H0E7	712 aa		11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	BSDC1	Q9NW68	430 aa	Predicted RBP	11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	SCN4A	P35499	1836 aa		11.95	□□□□□ -0.5
PTBP3-208	ENST00000487997	SNED1	Q8TER0	1413 aa		11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	LTBP1	Q14766	1721 aa		11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	GLTPD2	A6NH11	291 aa		11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	TRIM27	P14373	513 aa		11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	EIF6	P56537	245 aa	Known RBP	11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	GPSM2	P81274	684 aa		11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	AOC3	Q16853	763 aa		11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	WASHC4	Q2M389	1173 aa		11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	INTS3	Q68E01	1043 aa	Known RBP	11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	ZNF687	Q8N1G0	1237 aa		11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	GGA1	Q9UJY5	639 aa		11.94	□□□□□ -0.5
PTBP3-208	ENST00000487997	XDH	P47989	1333 aa		11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	UFL1	O94874	794 aa		11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	GNAI3	P08754	354 aa		11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	MS4A1	P11836	297 aa		11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	EPHA10	Q5JZY3	1008 aa		11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	SLC51A	Q86UW1	340 aa		11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	PLPP6	Q8IY26	295 aa		11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	ANKRD2	Q9GZV1	360 aa		11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	BICC1	Q9H694	974 aa	Known RBP	11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	RCAN3	Q9UKA8	241 aa		11.93	□□□□□ -0.5
PTBP3-208	ENST00000487997	WDR90	Q96KV7	1748 aa		11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	ATP2B4	P23634	1241 aa		11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	KCNJ4	P48050	445 aa		11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	KIAA2012	Q0VF49	1180 aa		11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	LDHAL6A	Q6ZMR3	332 aa		11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	DZIP1L	Q8IYY4	767 aa	Known RBP	11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	TBC1D16	Q8TBP0	767 aa		11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	BBX	Q8WY36	941 aa	Predicted RBP	11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	RRAGC	Q9HB90	399 aa		11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	CNNM1	Q9NRU3	951 aa		11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	PODXL2	Q9NZ53	605 aa		11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	MINPP1	Q9UNW1	487 aa		11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	DUOX1	Q9NRD9	1551 aa		11.92	□□□□□ -0.5
PTBP3-208	ENST00000487997	PSME4	Q14997	1843 aa		11.91	□□□□□ -0.5
PTBP3-208	ENST00000487997	KAZALD1	Q96I82	304 aa		11.91	□□□□□ -0.5
PTBP3-208	ENST00000487997	NMRK2	Q9NPI5	230 aa		11.91	□□□□□ -0.5
PTBP3-208	ENST00000487997	POLL	Q9UGP5	575 aa		11.91	□□□□□ -0.5
PTBP3-208	ENST00000487997	ZNRF3	Q9ULT6	936 aa		11.91	□□□□□ -0.5
PTBP3-208	ENST00000487997	FZD9	O00144	591 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 105 ms