RNA–Protein interactions for RNA: ENST00000487913.5

NR1H3-224, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-224ENST00000487913 CEP290O15078 2479 aa17.59■□□□□ 0.41
NR1H3-224ENST00000487913 WTIPA6NIX2 430 aaPredicted RBP17.59■□□□□ 0.41
NR1H3-224ENST00000487913 INHBEP58166 350 aa17.59■□□□□ 0.41
NR1H3-224ENST00000487913 PODNQ7Z5L7 613 aa17.59■□□□□ 0.41
NR1H3-224ENST00000487913 TMEM106CQ9BVX2 250 aa17.59■□□□□ 0.41
NR1H3-224ENST00000487913 EFCC1Q9HA90 598 aa17.59■□□□□ 0.41
NR1H3-224ENST00000487913 CRHR2Q13324 411 aa17.58■□□□□ 0.4
NR1H3-224ENST00000487913 DACT2Q5SW24 774 aa17.58■□□□□ 0.4
NR1H3-224ENST00000487913 ANKRD13DQ6ZTN6 518 aa17.58■□□□□ 0.4
NR1H3-224ENST00000487913 ZNF333Q96JL9 665 aa17.58■□□□□ 0.4
NR1H3-224ENST00000487913 XDHP47989 1333 aa17.57■□□□□ 0.4
NR1H3-224ENST00000487913 OGFOD1Q8N543 542 aa17.57■□□□□ 0.4
NR1H3-224ENST00000487913 SLC10A4Q96EP9 437 aa17.57■□□□□ 0.4
NR1H3-224ENST00000487913 WNK4Q96J92 1243 aa17.57■□□□□ 0.4
NR1H3-224ENST00000487913 CLMNQ96JQ2 1002 aa17.57■□□□□ 0.4
NR1H3-224ENST00000487913 MAPK8IP3Q9UPT6 1336 aa17.56■□□□□ 0.4
NR1H3-224ENST00000487913 CHRDL2Q6WN34 429 aa17.56■□□□□ 0.4
NR1H3-224ENST00000487913 SLC17A8Q8NDX2 589 aa17.56■□□□□ 0.4
NR1H3-224ENST00000487913 FBXW7Q969H0 707 aa17.56■□□□□ 0.4
NR1H3-224ENST00000487913 CCDC85AQ96PX6 553 aaPredicted RBP17.56■□□□□ 0.4
NR1H3-224ENST00000487913 ZBTB48P10074 688 aaPredicted RBP17.55■□□□□ 0.4
NR1H3-224ENST00000487913 APOBEC3FQ8IUX4 373 aaKnown RBP17.55■□□□□ 0.4
NR1H3-224ENST00000487913 BABAM1Q9NWV8 329 aa17.55■□□□□ 0.4
NR1H3-224ENST00000487913 SSC5DA1L4H1 1573 aa17.54■□□□□ 0.4
NR1H3-224ENST00000487913 MYCP01106 439 aaPredicted RBP17.54■□□□□ 0.4
NR1H3-224ENST00000487913 ATP2B4P23634 1241 aa17.54■□□□□ 0.4
NR1H3-224ENST00000487913 SP3Q02447 781 aa17.54■□□□□ 0.4
NR1H3-224ENST00000487913 TRIM28Q13263 835 aaKnown RBP17.54■□□□□ 0.4
NR1H3-224ENST00000487913 GJA5P36382 358 aa17.53■□□□□ 0.4
NR1H3-224ENST00000487913 MAP3K11Q16584 847 aa17.53■□□□□ 0.4
NR1H3-224ENST00000487913 SLC4A8Q2Y0W8 1093 aa17.53■□□□□ 0.4
NR1H3-224ENST00000487913 CCDC152Q4G0S7 254 aa17.53■□□□□ 0.4
NR1H3-224ENST00000487913 ZBTB38Q8NAP3 1195 aaPredicted RBP17.53■□□□□ 0.4
NR1H3-224ENST00000487913 ZBED3Q96IU2 234 aaPredicted RBP17.53■□□□□ 0.4
NR1H3-224ENST00000487913 PTPN18Q99952 460 aa17.53■□□□□ 0.4
NR1H3-224ENST00000487913 RBM27Q9P2N5 1060 aaKnown RBP17.53■□□□□ 0.4
NR1H3-224ENST00000487913 COL6A3P12111 3177 aa17.53■□□□□ 0.4
NR1H3-224ENST00000487913 MED23Q9ULK4 1368 aa17.53■□□□□ 0.4
NR1H3-224ENST00000487913 MYO3BQ8WXR4 1341 aa17.52■□□□□ 0.4
NR1H3-224ENST00000487913 ZNF646O15015 1829 aaPredicted RBP17.52■□□□□ 0.4
NR1H3-224ENST00000487913 RIPK4P57078 832 aa17.52■□□□□ 0.4
NR1H3-224ENST00000487913 SLC9C1Q4G0N8 1177 aa17.52■□□□□ 0.4
NR1H3-224ENST00000487913 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.4
NR1H3-224ENST00000487913 STRIP1Q5VSL9 837 aa17.52■□□□□ 0.4
NR1H3-224ENST00000487913 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
NR1H3-224ENST00000487913 DEFB129Q9H1M3 183 aa17.52■□□□□ 0.4
NR1H3-224ENST00000487913 PTCH2Q9Y6C5 1203 aa17.52■□□□□ 0.4
NR1H3-224ENST00000487913 KIAA0825Q8IV33 1275 aa17.51■□□□□ 0.39
NR1H3-224ENST00000487913 ANKRD18AQ8IVF6 992 aa17.51■□□□□ 0.39
NR1H3-224ENST00000487913 OTUD7BQ6GQQ9 843 aa17.5■□□□□ 0.39
NR1H3-224ENST00000487913 DBF4Q9UBU7 674 aaPredicted RBP17.5■□□□□ 0.39
NR1H3-224ENST00000487913 CUL9Q8IWT3 2517 aa17.5■□□□□ 0.39
NR1H3-224ENST00000487913 COL1A1P02452 1464 aaPredicted RBP17.5■□□□□ 0.39
NR1H3-224ENST00000487913 PPP1R12BO60237 982 aaPredicted RBP17.49■□□□□ 0.39
NR1H3-224ENST00000487913 PDE8AO60658 829 aa17.49■□□□□ 0.39
NR1H3-224ENST00000487913 NBPF11Q86T75 865 aa17.49■□□□□ 0.39
NR1H3-224ENST00000487913 TXNRD3Q86VQ6 643 aa17.49■□□□□ 0.39
NR1H3-224ENST00000487913 LAMB1P07942 1786 aa17.48■□□□□ 0.39
NR1H3-224ENST00000487913 TESPA1A2RU30 521 aaPredicted RBP17.48■□□□□ 0.39
NR1H3-224ENST00000487913 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
NR1H3-224ENST00000487913 COA1Q9GZY4 146 aa17.48■□□□□ 0.39
NR1H3-224ENST00000487913 PNNQ9H307 717 aaKnown RBP17.48■□□□□ 0.39
NR1H3-224ENST00000487913 CHL1O00533 1208 aa17.47■□□□□ 0.39
NR1H3-224ENST00000487913 MMP14P50281 582 aa17.47■□□□□ 0.39
NR1H3-224ENST00000487913 TTLL5Q6EMB2 1281 aa17.47■□□□□ 0.39
NR1H3-224ENST00000487913 SH3TC2Q8TF17 1288 aa17.47■□□□□ 0.39
NR1H3-224ENST00000487913 HYPKQ9NX55 129 aa17.47■□□□□ 0.39
NR1H3-224ENST00000487913 MINPP1Q9UNW1 487 aa17.47■□□□□ 0.39
NR1H3-224ENST00000487913 PCDHAC2Q9Y5I4 1007 aa17.47■□□□□ 0.39
NR1H3-224ENST00000487913 PCCAP05165 728 aaPredicted RBP17.46■□□□□ 0.39
NR1H3-224ENST00000487913 KLRK1P26718 216 aa17.46■□□□□ 0.39
NR1H3-224ENST00000487913 TMPOP42166 694 aaKnown RBP17.46■□□□□ 0.39
NR1H3-224ENST00000487913 CCT4P50991 539 aaKnown RBP17.46■□□□□ 0.39
NR1H3-224ENST00000487913 RIC3Q7Z5B4 369 aa17.46■□□□□ 0.39
NR1H3-224ENST00000487913 CCER1Q8TC90 406 aaPredicted RBP17.46■□□□□ 0.39
NR1H3-224ENST00000487913 MYD88Q99836 296 aa17.46■□□□□ 0.39
NR1H3-224ENST00000487913 LAS1LQ9Y4W2 734 aaKnown RBP17.46■□□□□ 0.39
NR1H3-224ENST00000487913 UNCXA6NJT0 531 aa17.45■□□□□ 0.38
NR1H3-224ENST00000487913 DLGAP5Q15398 846 aa17.45■□□□□ 0.38
NR1H3-224ENST00000487913 NBPF12Q5TAG4 269 aaPredicted RBP17.45■□□□□ 0.38
NR1H3-224ENST00000487913 DPF3Q92784 378 aa17.45■□□□□ 0.38
NR1H3-224ENST00000487913 PRO3102Q9H379 93 aa17.45■□□□□ 0.38
NR1H3-224ENST00000487913 CLRN2A0PK11 232 aa17.44■□□□□ 0.38
NR1H3-224ENST00000487913 USP2O75604 605 aaPredicted RBP17.44■□□□□ 0.38
NR1H3-224ENST00000487913 HOXB7P09629 217 aa17.44■□□□□ 0.38
NR1H3-224ENST00000487913 GTF2IP78347 998 aa17.44■□□□□ 0.38
NR1H3-224ENST00000487913 LMOD3Q0VAK6 560 aa17.44■□□□□ 0.38
NR1H3-224ENST00000487913 CCDC191Q8NCU4 936 aa17.44■□□□□ 0.38
NR1H3-224ENST00000487913 SHISA4Q96DD7 197 aa17.44■□□□□ 0.38
NR1H3-224ENST00000487913 MS4A4AQ96JQ5 239 aa17.44■□□□□ 0.38
NR1H3-224ENST00000487913 CDC5LQ99459 802 aaKnown RBP17.44■□□□□ 0.38
NR1H3-224ENST00000487913 BSDC1Q9NW68 430 aaPredicted RBP17.44■□□□□ 0.38
NR1H3-224ENST00000487913 PPP2R3BQ9Y5P8 575 aa17.44■□□□□ 0.38
NR1H3-224ENST00000487913 AOX1Q06278 1338 aa17.44■□□□□ 0.38
NR1H3-224ENST00000487913 LAMA3Q16787 3333 aa17.43■□□□□ 0.38
NR1H3-224ENST00000487913 IREB2P48200 963 aaKnown RBP17.43■□□□□ 0.38
NR1H3-224ENST00000487913 GOLGA2Q08379 1002 aa17.43■□□□□ 0.38
NR1H3-224ENST00000487913 ARHGEF6Q15052 776 aa17.43■□□□□ 0.38
NR1H3-224ENST00000487913 SUPT20HL1Q3ZLR7 823 aa17.43■□□□□ 0.38
NR1H3-224ENST00000487913 BRI3BPQ8WY22 251 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms