RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 SIRT2Q8IXJ6 389 aa8.53□□□□□ -1.04
UBR4-214ENST00000486515 TTLL6Q8N841 843 aa8.53□□□□□ -1.04
UBR4-214ENST00000486515 ZNF594Q96JF6 807 aaPredicted RBP8.53□□□□□ -1.04
UBR4-214ENST00000486515 NEUROD6Q96NK8 337 aa8.53□□□□□ -1.04
UBR4-214ENST00000486515 SEC31BQ9NQW1 1179 aa8.53□□□□□ -1.04
UBR4-214ENST00000486515 PIM2Q9P1W9 311 aa8.53□□□□□ -1.04
UBR4-214ENST00000486515 KLRG2A4D1S0 409 aaPredicted RBP8.52□□□□□ -1.05
UBR4-214ENST00000486515 FRAT2O75474 233 aaPredicted RBP8.52□□□□□ -1.05
UBR4-214ENST00000486515 POTEIP0CG38 1075 aa8.52□□□□□ -1.05
UBR4-214ENST00000486515 POTEJP0CG39 1038 aa8.52□□□□□ -1.05
UBR4-214ENST00000486515 SLC5A1P13866 664 aa8.52□□□□□ -1.05
UBR4-214ENST00000486515 HOXA10P31260 410 aaPredicted RBP8.52□□□□□ -1.05
UBR4-214ENST00000486515 CCDC158Q5M9N0 1113 aa8.52□□□□□ -1.05
UBR4-214ENST00000486515 CC2D2BQ6DHV5 1058 aa8.52□□□□□ -1.05
UBR4-214ENST00000486515 AACSQ86V21 672 aa8.52□□□□□ -1.05
UBR4-214ENST00000486515 SMC5Q8IY18 1101 aa8.52□□□□□ -1.05
UBR4-214ENST00000486515 SUPT20HQ8NEM7 779 aa8.52□□□□□ -1.05
UBR4-214ENST00000486515 KLHDC4Q8TBB5 520 aa8.52□□□□□ -1.05
UBR4-214ENST00000486515 RHPN1Q8TCX5 695 aa8.52□□□□□ -1.05
UBR4-214ENST00000486515 GNL3LQ9NVN8 582 aaKnown RBP8.52□□□□□ -1.05
UBR4-214ENST00000486515 ERC2O15083 957 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 CA12O43570 354 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 PDE8BO95263 885 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 CHRNA5P30532 468 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 RFX5P48382 616 aaPredicted RBP8.51□□□□□ -1.05
UBR4-214ENST00000486515 NUCB1Q02818 461 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 CHRNDQ07001 517 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 TFCP2Q12800 502 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 PUM3Q15397 648 aaKnown RBP8.51□□□□□ -1.05
UBR4-214ENST00000486515 ATP2B3Q16720 1220 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 LRRC24Q50LG9 513 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 DALRD3Q5D0E6 543 aaKnown RBP8.51□□□□□ -1.05
UBR4-214ENST00000486515 DPP8Q6V1X1 898 aaPredicted RBP8.51□□□□□ -1.05
UBR4-214ENST00000486515 CELF1Q92879 486 aaKnown RBP8.51□□□□□ -1.05
UBR4-214ENST00000486515 GPR101Q96P66 508 aaPredicted RBP8.51□□□□□ -1.05
UBR4-214ENST00000486515 EYA3Q99504 573 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 LNPKQ9C0E8 428 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 IL1RAPL2Q9NP60 686 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 GGA1Q9UJY5 639 aa8.51□□□□□ -1.05
UBR4-214ENST00000486515 ABT1Q9ULW3 272 aaKnown RBP8.51□□□□□ -1.05
UBR4-214ENST00000486515 NSFL1CQ9UNZ2 370 aaKnown RBP8.51□□□□□ -1.05
UBR4-214ENST00000486515 LAMB2P55268 1798 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 COL6A3P12111 3177 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 C6orf229H3BNL8 230 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 ATP2B4P23634 1241 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 GRM1Q13255 1194 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 UBE4AQ14139 1066 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 CCDC93Q567U6 631 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 PRPF40BQ6NWY9 871 aaKnown RBP8.5□□□□□ -1.05
UBR4-214ENST00000486515 C3orf67Q6ZVT6 689 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 PAXIP1Q6ZW49 1069 aaPredicted RBP8.5□□□□□ -1.05
UBR4-214ENST00000486515 SP8Q8IXZ3 490 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 RTKN2Q8IZC4 609 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 LPIN2Q92539 896 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 ZC3H12CQ9C0D7 883 aaKnown RBP8.5□□□□□ -1.05
UBR4-214ENST00000486515 GPR108Q9NPR9 543 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 DAXXQ9UER7 740 aaPredicted RBP8.5□□□□□ -1.05
UBR4-214ENST00000486515 MINPP1Q9UNW1 487 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 LEMD3Q9Y2U8 911 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 ATP6V0A2Q9Y487 856 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 XDHP47989 1333 aa8.5□□□□□ -1.05
UBR4-214ENST00000486515 DDX60Q8IY21 1712 aaKnown RBP8.49□□□□□ -1.05
UBR4-214ENST00000486515 UFL1O94874 794 aa8.49□□□□□ -1.05
UBR4-214ENST00000486515 ECE1P42892 770 aa8.49□□□□□ -1.05
UBR4-214ENST00000486515 RGS3P49796 1198 aa8.49□□□□□ -1.05
UBR4-214ENST00000486515 TNNI3KQ59H18 835 aa8.49□□□□□ -1.05
UBR4-214ENST00000486515 TTC39AQ5SRH9 613 aa8.49□□□□□ -1.05
UBR4-214ENST00000486515 DPY19L2Q6NUT2 758 aa8.49□□□□□ -1.05
UBR4-214ENST00000486515 ZNF804AQ7Z570 1209 aa8.49□□□□□ -1.05
UBR4-214ENST00000486515 HELBQ8NG08 1087 aaPredicted RBP8.49□□□□□ -1.05
UBR4-214ENST00000486515 CAPNS2Q96L46 248 aa8.49□□□□□ -1.05
UBR4-214ENST00000486515 PUS3Q9BZE2 481 aaKnown RBP8.49□□□□□ -1.05
UBR4-214ENST00000486515 RIPOR2Q9Y4F9 1068 aa8.49□□□□□ -1.05
UBR4-214ENST00000486515 FPGT-TNNI3KV9GXZ4 949 aa8.49□□□□□ -1.05
UBR4-214ENST00000486515 SPEF2Q9C093 1822 aa8.49□□□□□ -1.05
UBR4-214ENST00000486515 A0A1B0GUL7 405 aa8.48□□□□□ -1.05
UBR4-214ENST00000486515 C21orf2O43822 256 aa8.48□□□□□ -1.05
UBR4-214ENST00000486515 SMARCA5O60264 1052 aaPredicted RBP8.48□□□□□ -1.05
UBR4-214ENST00000486515 TAF5LO75529 589 aa8.48□□□□□ -1.05
UBR4-214ENST00000486515 SASH1O94885 1247 aa8.48□□□□□ -1.05
UBR4-214ENST00000486515 ITGBL1O95965 494 aaPredicted RBP8.48□□□□□ -1.05
UBR4-214ENST00000486515 UQCRFS1P1P0C7P4 283 aa8.48□□□□□ -1.05
UBR4-214ENST00000486515 PRKCSHP14314 528 aaPredicted RBP8.48□□□□□ -1.05
UBR4-214ENST00000486515 MX1P20591 662 aa8.48□□□□□ -1.05
UBR4-214ENST00000486515 LMNB1P20700 586 aa8.48□□□□□ -1.05
UBR4-214ENST00000486515 RASSF7Q02833 373 aa8.48□□□□□ -1.05
UBR4-214ENST00000486515 LRRFIP1Q32MZ4 808 aaKnown RBP8.48□□□□□ -1.05
UBR4-214ENST00000486515 CASC1Q6TDU7 716 aa8.48□□□□□ -1.05
UBR4-214ENST00000486515 ATG9AQ7Z3C6 839 aa8.48□□□□□ -1.05
UBR4-214ENST00000486515 CCDC8Q9H0W5 538 aaPredicted RBP8.48□□□□□ -1.05
UBR4-214ENST00000486515 ZNF804BA4D1E1 1349 aa8.48□□□□□ -1.05
UBR4-214ENST00000486515 MYH3P11055 1940 aa8.47□□□□□ -1.05
UBR4-214ENST00000486515 TRIM6-TRIM34B2RNG4 842 aa8.47□□□□□ -1.05
UBR4-214ENST00000486515 EIF5BO60841 1220 aaKnown RBP8.47□□□□□ -1.05
UBR4-214ENST00000486515 GLRX3O76003 335 aaKnown RBP8.47□□□□□ -1.05
UBR4-214ENST00000486515 KCNA3P22001 575 aa8.47□□□□□ -1.05
UBR4-214ENST00000486515 TIMM10P62072 90 aa8.47□□□□□ -1.05
UBR4-214ENST00000486515 WASHC4Q2M389 1173 aa8.47□□□□□ -1.05
UBR4-214ENST00000486515 LDHDQ86WU2 507 aa8.47□□□□□ -1.05
UBR4-214ENST00000486515 COL25A1Q9BXS0 654 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms