RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 LDHAL6AQ6ZMR3 332 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 G2E3Q7L622 706 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 KRT26Q7Z3Y9 468 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 FBXW7Q969H0 707 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 CCDC102AQ96A19 550 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 CAPNS2Q96L46 248 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 GPR101Q96P66 508 aaPredicted RBP9.42□□□□□ -0.9
CPNE1-226ENST00000486021 ZNF408Q9H9D4 720 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 CNNM1Q9NRU3 951 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 A0A1B0GUL6 1792 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 TBC1D10BQ4KMP7 808 aaPredicted RBP9.41□□□□□ -0.9
CPNE1-226ENST00000486021 BEND3Q5T5X7 828 aa9.41□□□□□ -0.9
CPNE1-226ENST00000486021 TTLL5Q6EMB2 1281 aa9.41□□□□□ -0.9
CPNE1-226ENST00000486021 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
CPNE1-226ENST00000486021 ZBTB12Q9Y330 459 aaPredicted RBP9.41□□□□□ -0.9
CPNE1-226ENST00000486021 ZNF280AP59817 542 aaPredicted RBP9.4□□□□□ -0.9
CPNE1-226ENST00000486021 CHRNDQ07001 517 aa9.4□□□□□ -0.9
CPNE1-226ENST00000486021 GRM1Q13255 1194 aa9.4□□□□□ -0.9
CPNE1-226ENST00000486021 SAMD7Q7Z3H4 446 aa9.4□□□□□ -0.9
CPNE1-226ENST00000486021 SAPCD2Q86UD0 394 aa9.4□□□□□ -0.9
CPNE1-226ENST00000486021 USP48Q86UV5 1035 aa9.4□□□□□ -0.9
CPNE1-226ENST00000486021 GLIS2Q9BZE0 524 aaPredicted RBP9.4□□□□□ -0.9
CPNE1-226ENST00000486021 GBA2Q9HCG7 927 aaPredicted RBP9.4□□□□□ -0.9
CPNE1-226ENST00000486021 MYOZ2Q9NPC6 264 aa9.4□□□□□ -0.9
CPNE1-226ENST00000486021 WBP1LQ9NX94 342 aa9.4□□□□□ -0.9
CPNE1-226ENST00000486021 THSD7BQ9C0I4 1608 aa9.4□□□□□ -0.9
CPNE1-226ENST00000486021 MROH5Q6ZUA9 1318 aa9.39□□□□□ -0.91
CPNE1-226ENST00000486021 BRPF1P55201 1214 aaPredicted RBP9.39□□□□□ -0.91
CPNE1-226ENST00000486021 HUNKP57058 714 aa9.39□□□□□ -0.91
CPNE1-226ENST00000486021 FKBP1AP62942 108 aaKnown RBP9.39□□□□□ -0.91
CPNE1-226ENST00000486021 UBE4AQ14139 1066 aa9.39□□□□□ -0.91
CPNE1-226ENST00000486021 FAM161AQ3B820 660 aa9.39□□□□□ -0.91
CPNE1-226ENST00000486021 CAVIN4Q5BKX8 364 aa9.39□□□□□ -0.91
CPNE1-226ENST00000486021 CST9Q5W186 159 aa9.39□□□□□ -0.91
CPNE1-226ENST00000486021 RGMBQ6NW40 437 aa9.39□□□□□ -0.91
CPNE1-226ENST00000486021 LMBR1LQ6UX01 489 aa9.39□□□□□ -0.91
CPNE1-226ENST00000486021 C15orf52Q6ZUT6 534 aaKnown RBP9.39□□□□□ -0.91
CPNE1-226ENST00000486021 VPS37DQ86XT2 251 aa9.39□□□□□ -0.91
CPNE1-226ENST00000486021 APOBEC3FQ8IUX4 373 aaKnown RBP9.39□□□□□ -0.91
CPNE1-226ENST00000486021 TRPM4Q8TD43 1214 aa9.39□□□□□ -0.91
CPNE1-226ENST00000486021 PAPPA2Q9BXP8 1791 aa9.38□□□□□ -0.91
CPNE1-226ENST00000486021 F6X3S4 739 aa9.38□□□□□ -0.91
CPNE1-226ENST00000486021 TRAF5O00463 557 aa9.38□□□□□ -0.91
CPNE1-226ENST00000486021 FRAT2O75474 233 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-226ENST00000486021 CASP7P55210 303 aa9.38□□□□□ -0.91
CPNE1-226ENST00000486021 SCARF1Q14162 830 aa9.38□□□□□ -0.91
CPNE1-226ENST00000486021 CYP4F22Q6NT55 531 aa9.38□□□□□ -0.91
CPNE1-226ENST00000486021 CD209Q9NNX6 404 aa9.38□□□□□ -0.91
CPNE1-226ENST00000486021 GGA3Q9NZ52 723 aa9.38□□□□□ -0.91
CPNE1-226ENST00000486021 CEP350Q5VT06 3117 aa9.38□□□□□ -0.91
CPNE1-226ENST00000486021 COL1A1P02452 1464 aaPredicted RBP9.38□□□□□ -0.91
CPNE1-226ENST00000486021 ZNF521Q96K83 1311 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 ARAP2Q8WZ64 1704 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 FOXN1O15353 648 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 IPO8O15397 1037 aaKnown RBP9.37□□□□□ -0.91
CPNE1-226ENST00000486021 ZNF157P51786 506 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-226ENST00000486021 HIRAP54198 1017 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-226ENST00000486021 GTF2IP78347 998 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 FOXO4P98177 505 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 SLFN5Q08AF3 891 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 TNFAIP1Q13829 316 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 TTLL12Q14166 644 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-226ENST00000486021 DLGAP5Q15398 846 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 COL13A1Q5TAT6 717 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-226ENST00000486021 ANGEL2Q5VTE6 544 aaKnown RBP9.37□□□□□ -0.91
CPNE1-226ENST00000486021 ARMC9Q7Z3E5 817 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 API5Q9BZZ5 524 aaKnown RBP9.37□□□□□ -0.91
CPNE1-226ENST00000486021 SMC4Q9NTJ3 1288 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 FBXO3Q9UK99 471 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 PPP2R3BQ9Y5P8 575 aa9.37□□□□□ -0.91
CPNE1-226ENST00000486021 UTYO14607 1347 aa9.36□□□□□ -0.91
CPNE1-226ENST00000486021 KIF16BQ96L93 1317 aa9.36□□□□□ -0.91
CPNE1-226ENST00000486021 UNCXA6NJT0 531 aa9.36□□□□□ -0.91
CPNE1-226ENST00000486021 PLIN1O60240 522 aa9.36□□□□□ -0.91
CPNE1-226ENST00000486021 IL1R1P14778 569 aa9.36□□□□□ -0.91
CPNE1-226ENST00000486021 DACT2Q5SW24 774 aa9.36□□□□□ -0.91
CPNE1-226ENST00000486021 MRPL50Q8N5N7 158 aaKnown RBP9.36□□□□□ -0.91
CPNE1-226ENST00000486021 TBC1D22AQ8WUA7 517 aa9.36□□□□□ -0.91
CPNE1-226ENST00000486021 AK9Q5TCS8 1911 aa9.36□□□□□ -0.91
CPNE1-226ENST00000486021 ZNF646O15015 1829 aaPredicted RBP9.35□□□□□ -0.91
CPNE1-226ENST00000486021 MAST3O60307 1309 aa9.35□□□□□ -0.91
CPNE1-226ENST00000486021 PPP1R12BO60237 982 aaPredicted RBP9.35□□□□□ -0.91
CPNE1-226ENST00000486021 SASH1O94885 1247 aa9.35□□□□□ -0.91
CPNE1-226ENST00000486021 IFIT1P09914 478 aaKnown RBP9.35□□□□□ -0.91
CPNE1-226ENST00000486021 HIBADHP31937 336 aaKnown RBP9.35□□□□□ -0.91
CPNE1-226ENST00000486021 TNNI2P48788 182 aa9.35□□□□□ -0.91
CPNE1-226ENST00000486021 RBM5P52756 815 aaKnown RBP eCLIP9.35□□□□□ -0.912e-6■■■□□ 15.7
CPNE1-226ENST00000486021 LBX1P52954 281 aa9.35□□□□□ -0.91
CPNE1-226ENST00000486021 SUPT20HL1Q3ZLR7 823 aa9.35□□□□□ -0.91
CPNE1-226ENST00000486021 HOOK2Q96ED9 719 aa9.35□□□□□ -0.91
CPNE1-226ENST00000486021 CDCA5Q96FF9 252 aa9.35□□□□□ -0.91
CPNE1-226ENST00000486021 GMLQ99445 158 aa9.35□□□□□ -0.91
CPNE1-226ENST00000486021 SPINK5Q9NQ38 1064 aaPredicted RBP9.35□□□□□ -0.91
CPNE1-226ENST00000486021 KCNQ5Q9NR82 932 aa9.35□□□□□ -0.91
CPNE1-226ENST00000486021 SAGE1Q9NXZ1 904 aa9.35□□□□□ -0.91
CPNE1-226ENST00000486021 COL4A1P02462 1669 aa9.35□□□□□ -0.91
CPNE1-226ENST00000486021 WNT10BO00744 389 aa9.34□□□□□ -0.91
CPNE1-226ENST00000486021 TAF5LO75529 589 aa9.34□□□□□ -0.91
CPNE1-226ENST00000486021 UBTFL1P0CB47 393 aaPredicted RBP9.34□□□□□ -0.91
CPNE1-226ENST00000486021 SREBF2Q12772 1141 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms