RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 APPBP2Q92624 585 aa12.43□□□□□ -0.42
TTC3-218ENST00000484047 CHPF2Q9P2E5 772 aa12.43□□□□□ -0.42
TTC3-218ENST00000484047 TMEM238LA0A1B0GVL6 79 aa12.43□□□□□ -0.42
TTC3-218ENST00000484047 ARSJQ5FYB0 599 aaPredicted RBP12.43□□□□□ -0.42
TTC3-218ENST00000484047 SPATA31C2B4DYI2 1134 aa12.42□□□□□ -0.42
TTC3-218ENST00000484047 GYS2P54840 703 aa12.42□□□□□ -0.42
TTC3-218ENST00000484047 GRIN2CQ14957 1233 aa12.42□□□□□ -0.42
TTC3-218ENST00000484047 SNAP47Q5SQN1 464 aa12.42□□□□□ -0.42
TTC3-218ENST00000484047 KIAA0907Q7Z7F0 614 aaPredicted RBP12.42□□□□□ -0.42
TTC3-218ENST00000484047 CCDC113Q9H0I3 377 aa12.42□□□□□ -0.42
TTC3-218ENST00000484047 SLKQ9H2G2 1235 aaPredicted RBP12.42□□□□□ -0.42
TTC3-218ENST00000484047 ST7Q9NRC1 585 aa12.42□□□□□ -0.42
TTC3-218ENST00000484047 EPB42P16452 691 aa12.41□□□□□ -0.42
TTC3-218ENST00000484047 CCDC181Q5TID7 509 aa12.41□□□□□ -0.42
TTC3-218ENST00000484047 TTC39BQ5VTQ0 682 aaPredicted RBP12.41□□□□□ -0.42
TTC3-218ENST00000484047 TRPM4Q8TD43 1214 aa12.41□□□□□ -0.42
TTC3-218ENST00000484047 NKD1Q969G9 470 aa12.41□□□□□ -0.42
TTC3-218ENST00000484047 EDN3P14138 238 aa12.41□□□□□ -0.42
TTC3-218ENST00000484047 POU4F2Q12837 409 aa12.41□□□□□ -0.42
TTC3-218ENST00000484047 SLITRK4Q8IW52 837 aa12.41□□□□□ -0.42
TTC3-218ENST00000484047 TCF12Q99081 682 aa12.41□□□□□ -0.42
TTC3-218ENST00000484047 LMNB2Q03252 620 aa12.4□□□□□ -0.42
TTC3-218ENST00000484047 CEP63Q96MT8 703 aa12.4□□□□□ -0.42
TTC3-218ENST00000484047 LIN7BQ9HAP6 207 aa12.4□□□□□ -0.42
TTC3-218ENST00000484047 G3BP2Q9UN86 482 aaKnown RBP12.4□□□□□ -0.42
TTC3-218ENST00000484047 TFE3P19532 575 aaPredicted RBP12.39□□□□□ -0.43
TTC3-218ENST00000484047 SQSTM1Q13501 440 aa12.39□□□□□ -0.43
TTC3-218ENST00000484047 DDR2Q16832 855 aa12.39□□□□□ -0.43
TTC3-218ENST00000484047 TNNI3KQ59H18 835 aa12.39□□□□□ -0.43
TTC3-218ENST00000484047 SEZ6Q53EL9 994 aa12.39□□□□□ -0.43
TTC3-218ENST00000484047 FAM196AQ6ZSG2 479 aa12.39□□□□□ -0.43
TTC3-218ENST00000484047 MEIOBQ8N635 442 aa12.39□□□□□ -0.43
TTC3-218ENST00000484047 CTSOP43234 321 aaPredicted RBP12.38□□□□□ -0.43
TTC3-218ENST00000484047 HOMER1Q86YM7 354 aa12.38□□□□□ -0.43
TTC3-218ENST00000484047 FBXO27Q8NI29 283 aa12.38□□□□□ -0.43
TTC3-218ENST00000484047 TMEM260Q9NX78 707 aa12.38□□□□□ -0.43
TTC3-218ENST00000484047 LEMD3Q9Y2U8 911 aa12.38□□□□□ -0.43
TTC3-218ENST00000484047 PLD4Q96BZ4 506 aa12.37□□□□□ -0.43
TTC3-218ENST00000484047 ENC1O14682 589 aa12.37□□□□□ -0.43
TTC3-218ENST00000484047 TKFCQ3LXA3 575 aa12.37□□□□□ -0.43
TTC3-218ENST00000484047 ARSHQ5FYA8 562 aa12.37□□□□□ -0.43
TTC3-218ENST00000484047 AGMOQ6ZNB7 445 aa12.37□□□□□ -0.43
TTC3-218ENST00000484047 CNTNAP3BQ96NU0 1288 aa12.37□□□□□ -0.43
TTC3-218ENST00000484047 CNTNAP3Q9BZ76 1288 aa12.37□□□□□ -0.43
TTC3-218ENST00000484047 POLMQ9NP87 494 aaPredicted RBP12.37□□□□□ -0.43
TTC3-218ENST00000484047 FAN1Q9Y2M0 1017 aa12.37□□□□□ -0.43
TTC3-218ENST00000484047 A0A1W2PNR3 127 aa12.36□□□□□ -0.43
TTC3-218ENST00000484047 PDPK1O15530 556 aa12.36□□□□□ -0.43
TTC3-218ENST00000484047 SASH3O75995 380 aa12.36□□□□□ -0.43
TTC3-218ENST00000484047 PRICKLE2Q7Z3G6 844 aa12.36□□□□□ -0.43
TTC3-218ENST00000484047 ZCCHC2Q9C0B9 1178 aaKnown RBP12.36□□□□□ -0.43
TTC3-218ENST00000484047 MAPK8IP1Q9UQF2 711 aa12.36□□□□□ -0.43
TTC3-218ENST00000484047 TLR3O15455 904 aaKnown RBP12.35□□□□□ -0.43
TTC3-218ENST00000484047 TRIM37O94972 964 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 ACPPP15309 386 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 SEPT6Q14141 434 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 TTBK2Q6IQ55 1244 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 KANK3Q6NY19 840 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 J3QL48 77 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 MSX1P28360 303 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 SLC19A1P41440 591 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 GIPRP48546 466 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 MASP1P48740 699 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 EIF6P56537 245 aaKnown RBP12.35□□□□□ -0.43
TTC3-218ENST00000484047 IFRD2Q12894 506 aaPredicted RBP12.35□□□□□ -0.43
TTC3-218ENST00000484047 BNC2Q6ZN30 1099 aaPredicted RBP12.35□□□□□ -0.43
TTC3-218ENST00000484047 CCNJLQ8IV13 435 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 ZKSCAN3Q9BRR0 538 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 BRD7Q9NPI1 651 aa12.35□□□□□ -0.43
TTC3-218ENST00000484047 SPINT1O43278 529 aa12.34□□□□□ -0.43
TTC3-218ENST00000484047 PAGE1O75459 146 aa12.34□□□□□ -0.43
TTC3-218ENST00000484047 F13A1P00488 732 aa12.34□□□□□ -0.43
TTC3-218ENST00000484047 S100BP04271 92 aaPredicted RBP12.34□□□□□ -0.43
TTC3-218ENST00000484047 GRIA4P48058 902 aa12.34□□□□□ -0.43
TTC3-218ENST00000484047 DZANK1Q9NVP4 752 aa12.34□□□□□ -0.43
TTC3-218ENST00000484047 ACTR10Q9NZ32 417 aa12.34□□□□□ -0.43
TTC3-218ENST00000484047 RIPOR2Q9Y4F9 1068 aa12.34□□□□□ -0.43
TTC3-218ENST00000484047 TARSP26639 723 aaKnown RBP12.33□□□□□ -0.44
TTC3-218ENST00000484047 RASGRF1Q13972 1273 aa12.33□□□□□ -0.44
TTC3-218ENST00000484047 KRT25Q7Z3Z0 450 aa12.33□□□□□ -0.44
TTC3-218ENST00000484047 OR13H1Q8NG92 308 aa12.33□□□□□ -0.44
TTC3-218ENST00000484047 TNKS2Q9H2K2 1166 aa12.33□□□□□ -0.44
TTC3-218ENST00000484047 MMP20O60882 483 aa12.33□□□□□ -0.44
TTC3-218ENST00000484047 MAP4K4O95819 1239 aaPredicted RBP12.33□□□□□ -0.44
TTC3-218ENST00000484047 C16orf86Q6ZW13 317 aa12.33□□□□□ -0.44
TTC3-218ENST00000484047 NECAB3Q96P71 396 aaPredicted RBP12.33□□□□□ -0.44
TTC3-218ENST00000484047 TRPA1O75762 1119 aa12.32□□□□□ -0.44
TTC3-218ENST00000484047 PDGFRBP09619 1106 aa12.32□□□□□ -0.44
TTC3-218ENST00000484047 FOXC1Q12948 553 aa12.32□□□□□ -0.44
TTC3-218ENST00000484047 TRIM42Q8IWZ5 723 aa12.32□□□□□ -0.44
TTC3-218ENST00000484047 SNIP1Q8TAD8 396 aaKnown RBP12.32□□□□□ -0.44
TTC3-218ENST00000484047 FEZ1Q99689 392 aa12.32□□□□□ -0.44
TTC3-218ENST00000484047 C11orf16Q9NQ32 467 aa12.32□□□□□ -0.44
TTC3-218ENST00000484047 PKD2L1Q9P0L9 805 aa12.32□□□□□ -0.44
TTC3-218ENST00000484047 METTL12A8MUP2 240 aa12.31□□□□□ -0.44
TTC3-218ENST00000484047 PHF20L1A8MW92 1017 aa12.31□□□□□ -0.44
TTC3-218ENST00000484047 FBXW10Q5XX13 1052 aa12.31□□□□□ -0.44
TTC3-218ENST00000484047 LRRC3Q9BY71 257 aa12.31□□□□□ -0.44
TTC3-218ENST00000484047 CEP44Q9C0F1 390 aa12.31□□□□□ -0.44
TTC3-218ENST00000484047 HSP90AB2PQ58FF8 381 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms