RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 CCDC87Q9NVE4 849 aa13.12□□□□□ -0.31
SMPD4-218ENST00000482171 NAA16Q6N069 864 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-218ENST00000482171 TSC1Q92574 1164 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 ZBTB1Q9Y2K1 713 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 SLC27A2O14975 620 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 SERPINC1P01008 464 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 SYT1P21579 422 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 TXLNAP40222 546 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 PTH1RQ03431 593 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 ISM2Q6H9L7 571 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 STX8Q9UNK0 236 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 RAD50Q92878 1312 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 CHAMP1Q96JM3 812 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 PUS3Q9BZE2 481 aaKnown RBP13.11□□□□□ -0.31
SMPD4-218ENST00000482171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMPD4-218ENST00000482171 ANKARQ7Z5J8 1434 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
SMPD4-218ENST00000482171 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 CD2BP2O95400 341 aaKnown RBP13.1□□□□□ -0.31
SMPD4-218ENST00000482171 ZAP70P43403 619 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 WASF1Q92558 559 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 ZKSCAN3Q9BRR0 538 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 VAT1LQ9HCJ6 419 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 CWC15Q9P013 229 aaKnown RBP13.1□□□□□ -0.31
SMPD4-218ENST00000482171 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 PDE8AO60658 829 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 F13A1P00488 732 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 SSRP1Q08945 709 aaKnown RBP13.1□□□□□ -0.31
SMPD4-218ENST00000482171 TAF3Q5VWG9 929 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 C17orf53Q8N3J3 647 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-218ENST00000482171 BBXQ8WY36 941 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-218ENST00000482171 SPATA31A3Q5VYP0 1347 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 FRMPD1Q5SYB0 1578 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 CEP57L1Q8IYX8 460 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 KBTBD3Q8NAB2 608 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 CDK5RAP3Q96JB5 506 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 CLIP2Q9UDT6 1046 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 ZBTB43O43298 467 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 MBD4O95243 580 aa13.1□□□□□ -0.31
SMPD4-218ENST00000482171 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-218ENST00000482171 NCOA5Q9HCD5 579 aaKnown RBP13.1□□□□□ -0.31
SMPD4-218ENST00000482171 IQGAP1P46940 1657 aa13.09□□□□□ -0.31
SMPD4-218ENST00000482171 DHX8Q14562 1220 aaKnown RBP13.09□□□□□ -0.31
SMPD4-218ENST00000482171 NOM1Q5C9Z4 860 aaKnown RBP13.09□□□□□ -0.31
SMPD4-218ENST00000482171 DHX32Q7L7V1 743 aaKnown RBP13.09□□□□□ -0.31
SMPD4-218ENST00000482171 UBXN4Q92575 508 aa13.09□□□□□ -0.31
SMPD4-218ENST00000482171 SSBP05455 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMPD4-218ENST00000482171 WTAPQ15007 396 aa13.09□□□□□ -0.31
SMPD4-218ENST00000482171 UVSSAQ2YD98 709 aa13.09□□□□□ -0.31
SMPD4-218ENST00000482171 CATIPQ7Z7H3 387 aa13.09□□□□□ -0.31
SMPD4-218ENST00000482171 ZHX3Q9H4I2 956 aa13.09□□□□□ -0.31
SMPD4-218ENST00000482171 TFCP2L1Q9NZI6 479 aa13.09□□□□□ -0.31
SMPD4-218ENST00000482171 UBE2HP62256 183 aa13.09□□□□□ -0.31
SMPD4-218ENST00000482171 CCDC43Q96MW1 224 aaKnown RBP13.09□□□□□ -0.31
SMPD4-218ENST00000482171 PKP1Q13835 747 aa13.08□□□□□ -0.31
SMPD4-218ENST00000482171 SMAP1Q8IYB5 467 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-218ENST00000482171 MYO3AQ8NEV4 1616 aa13.08□□□□□ -0.32
SMPD4-218ENST00000482171 KIF18AQ8NI77 898 aa13.08□□□□□ -0.32
SMPD4-218ENST00000482171 USP21Q9UK80 565 aa13.08□□□□□ -0.32
SMPD4-218ENST00000482171 DIP2BQ9P265 1576 aa13.08□□□□□ -0.32
SMPD4-218ENST00000482171 POLR3GO15318 223 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-218ENST00000482171 IPO7O95373 1038 aaKnown RBP13.08□□□□□ -0.32
SMPD4-218ENST00000482171 KLHL10Q6JEL2 608 aa13.08□□□□□ -0.32
SMPD4-218ENST00000482171 CCDC186Q7Z3E2 898 aa13.08□□□□□ -0.32
SMPD4-218ENST00000482171 CDCA7Q9BWT1 371 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-218ENST00000482171 MROH2AA6NES4 1674 aa13.08□□□□□ -0.32
SMPD4-218ENST00000482171 GPAA1O43292 621 aa13.08□□□□□ -0.32
SMPD4-218ENST00000482171 HSPA4P34932 840 aa13.08□□□□□ -0.32
SMPD4-218ENST00000482171 ALG1Q9BT22 464 aa13.08□□□□□ -0.32
SMPD4-218ENST00000482171 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMPD4-218ENST00000482171 DBNLQ9UJU6 430 aaKnown RBP13.08□□□□□ -0.32
SMPD4-218ENST00000482171 V9GYY5 206 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-218ENST00000482171 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 PTPRUQ92729 1446 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 AOX1Q06278 1338 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 ST5P78524 1137 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 SETQ01105 290 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-218ENST00000482171 PTCH1Q13635 1447 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 PTPDC1A2A3K4 754 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 B4E1Z4 1266 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 ZNF445P59923 1031 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 CRNKL1Q9BZJ0 848 aaKnown RBP13.07□□□□□ -0.32
SMPD4-218ENST00000482171 ARMT1Q9H993 441 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 ZNF165P49910 485 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 NLRP5P59047 1200 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 LEKR1Q6ZMV7 388 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 CCAR1Q8IX12 1150 aaKnown RBP13.07□□□□□ -0.32
SMPD4-218ENST00000482171 PIGBQ92521 554 aa13.07□□□□□ -0.32
SMPD4-218ENST00000482171 INTS4Q96HW7 963 aaKnown RBP13.07□□□□□ -0.32
SMPD4-218ENST00000482171 AGLP35573 1532 aa13.06□□□□□ -0.32
SMPD4-218ENST00000482171 KIAA1210Q9ULL0 1709 aa13.06□□□□□ -0.32
SMPD4-218ENST00000482171 ATP5JP18859 108 aa13.06□□□□□ -0.32
SMPD4-218ENST00000482171 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-218ENST00000482171 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
SMPD4-218ENST00000482171 DACT1Q9NYF0 836 aa13.06□□□□□ -0.32
SMPD4-218ENST00000482171 MAGEB6P1A0A0J9YX57 407 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms