RNA–Protein interactions for RNA: ENST00000481932.1

SH3YL1-223, Transcript of SH3 and SYLF domain containing 1, human

TSL 3

Gene SH3YL1, Length 885 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-223	ENST00000481932	PROSER3	Q2NL68	480 aa		10.31	□□□□□ -0.76
SH3YL1-223	ENST00000481932	CC2D2B	Q6DHV5	1058 aa		10.31	□□□□□ -0.76
SH3YL1-223	ENST00000481932	PPP1R42	Q7Z4L9	355 aa		10.31	□□□□□ -0.76
SH3YL1-223	ENST00000481932	HACL1	Q9UJ83	578 aa		10.31	□□□□□ -0.76
SH3YL1-223	ENST00000481932	DDX60	Q8IY21	1712 aa	Known RBP	10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	CNTNAP1	P78357	1384 aa		10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	THSD7B	Q9C0I4	1608 aa		10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	EIF2S2	P20042	333 aa	Known RBP	10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	EPHX2	P34913	555 aa		10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	GRIPAP1	Q4V328	841 aa		10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	EAPP	Q56P03	285 aa	Predicted RBP	10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	SLC51A	Q86UW1	340 aa		10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	GPC2	Q8N158	579 aa		10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	SYNE4	Q8N205	404 aa		10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	JDP2	Q8WYK2	163 aa		10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	RBM17	Q96I25	401 aa	Known RBP	10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	CRAMP1	Q96RY5	1269 aa		10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	ADGRG1	Q9Y653	693 aa		10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	DUOX1	Q9NRD9	1551 aa		10.3	□□□□□ -0.76
SH3YL1-223	ENST00000481932	GPR37	O15354	613 aa		10.29	□□□□□ -0.76
SH3YL1-223	ENST00000481932	ANXA1	P04083	346 aa		10.29	□□□□□ -0.76
SH3YL1-223	ENST00000481932	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.29	□□□□□ -0.76
SH3YL1-223	ENST00000481932	CCDC146	Q8IYE0	955 aa		10.29	□□□□□ -0.76
SH3YL1-223	ENST00000481932	ABCC4	O15439	1325 aa		10.29	□□□□□ -0.76
SH3YL1-223	ENST00000481932	EIF6	P56537	245 aa	Known RBP	10.28	□□□□□ -0.76
SH3YL1-223	ENST00000481932	PPP4C	P60510	307 aa		10.28	□□□□□ -0.76
SH3YL1-223	ENST00000481932	WDR43	Q15061	677 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
SH3YL1-223	ENST00000481932	HSP90AB3P	Q58FF7	597 aa		10.28	□□□□□ -0.76
SH3YL1-223	ENST00000481932	PNMA8A	Q86V59	439 aa	Predicted RBP	10.28	□□□□□ -0.76
SH3YL1-223	ENST00000481932	GPIHBP1	Q8IV16	184 aa		10.28	□□□□□ -0.76
SH3YL1-223	ENST00000481932	NECTIN2	Q92692	538 aa		10.28	□□□□□ -0.76
SH3YL1-223	ENST00000481932	UTP14A	Q9BVJ6	771 aa	Known RBP	10.28	□□□□□ -0.76
SH3YL1-223	ENST00000481932	MKRN1	Q9UHC7	482 aa	Known RBP	10.28	□□□□□ -0.76
SH3YL1-223	ENST00000481932	DNAJB2	P25686	324 aa		10.27	□□□□□ -0.77
SH3YL1-223	ENST00000481932	SLC4A3	P48751	1232 aa		10.27	□□□□□ -0.77
SH3YL1-223	ENST00000481932	KRT24	Q2M2I5	525 aa		10.27	□□□□□ -0.77
SH3YL1-223	ENST00000481932	NLRP10	Q86W26	655 aa		10.27	□□□□□ -0.77
SH3YL1-223	ENST00000481932	NIM1K	Q8IY84	436 aa		10.27	□□□□□ -0.77
SH3YL1-223	ENST00000481932	LARGE2	Q8N3Y3	721 aa		10.27	□□□□□ -0.77
SH3YL1-223	ENST00000481932	XAGE3	Q8WTP9	111 aa		10.27	□□□□□ -0.77
SH3YL1-223	ENST00000481932	RUNDC1	Q96C34	613 aa		10.27	□□□□□ -0.77
SH3YL1-223	ENST00000481932	NLRP3	Q96P20	1036 aa		10.27	□□□□□ -0.77
SH3YL1-223	ENST00000481932	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.27	□□□□□ -0.77
SH3YL1-223	ENST00000481932	TMEM88B	A6NKF7	163 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	CHL1	O00533	1208 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	PPIP5K2	O43314	1243 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	HOXB7	P09629	217 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	LMOD1	P29536	600 aa	Predicted RBP	10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	SCNN1D	P51172	638 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	AIMP1	Q12904	312 aa	Known RBP	10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	DDX10	Q13206	875 aa	Known RBP	10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	NEUROD2	Q15784	382 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	AOC3	Q16853	763 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	SWT1	Q5T5J6	900 aa	Known RBP	10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	HDGFL1	Q5TGJ6	251 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	COPS6	Q7L5N1	327 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	SLF2	Q8IX21	1173 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	TNS4	Q8IZW8	715 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	TMX4	Q9H1E5	349 aa	Predicted RBP	10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	CHPF2	Q9P2E5	772 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	ATP6V0A2	Q9Y487	856 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	GJA3	Q9Y6H8	435 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	SH3TC1	Q8TE82	1336 aa		10.26	□□□□□ -0.77
SH3YL1-223	ENST00000481932	TCERG1	O14776	1098 aa	Known RBP	10.25	□□□□□ -0.77
SH3YL1-223	ENST00000481932	RNF40	O75150	1001 aa		10.25	□□□□□ -0.77
SH3YL1-223	ENST00000481932	ITGBL1	O95965	494 aa	Predicted RBP	10.25	□□□□□ -0.77
SH3YL1-223	ENST00000481932	SLC10A5	Q5PT55	438 aa		10.25	□□□□□ -0.77
SH3YL1-223	ENST00000481932	COL4A1	P02462	1669 aa		10.25	□□□□□ -0.77
SH3YL1-223	ENST00000481932	OAT	P04181	439 aa		10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	HCLS1	P14317	486 aa	Predicted RBP	10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	TCIRG1	Q13488	830 aa		10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	GRAP	Q13588	217 aa		10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	MAP1S	Q66K74	1059 aa	Predicted RBP	10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	SUPT20H	Q8NEM7	779 aa		10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	GRAPL	Q8TC17	118 aa	Predicted RBP	10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	VPS33B	Q9H267	617 aa		10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	TRMT112	Q9UI30	125 aa	Known RBP	10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	LAS1L	Q9Y4W2	734 aa	Known RBP	10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	CDHR2	Q9BYE9	1310 aa		10.24	□□□□□ -0.77
SH3YL1-223	ENST00000481932	RASSF10	A6NK89	507 aa		10.23	□□□□□ -0.77
SH3YL1-223	ENST00000481932	FAM161A	Q3B820	660 aa		10.23	□□□□□ -0.77
SH3YL1-223	ENST00000481932	DPP8	Q6V1X1	898 aa	Predicted RBP	10.23	□□□□□ -0.77
SH3YL1-223	ENST00000481932	DDX46	Q7L014	1031 aa	Known RBP	10.23	□□□□□ -0.77
SH3YL1-223	ENST00000481932	CNTROB	Q8N137	903 aa		10.23	□□□□□ -0.77
SH3YL1-223	ENST00000481932	PLBD2	Q8NHP8	589 aa		10.23	□□□□□ -0.77
SH3YL1-223	ENST00000481932	TMEM134	Q9H6X4	195 aa		10.23	□□□□□ -0.77
SH3YL1-223	ENST00000481932	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.23	□□□□□ -0.77
SH3YL1-223	ENST00000481932	DBF4	Q9UBU7	674 aa	Predicted RBP	10.23	□□□□□ -0.77
SH3YL1-223	ENST00000481932	TRPM7	Q96QT4	1865 aa		10.23	□□□□□ -0.77
SH3YL1-223	ENST00000481932	TAF1	P21675	1872 aa		10.22	□□□□□ -0.77
SH3YL1-223	ENST00000481932	BBOX1	O75936	387 aa		10.22	□□□□□ -0.77
SH3YL1-223	ENST00000481932	EPS15	P42566	896 aa		10.22	□□□□□ -0.77
SH3YL1-223	ENST00000481932	VEGFB	P49765	207 aa		10.22	□□□□□ -0.77
SH3YL1-223	ENST00000481932	KIAA2012	Q0VF49	1180 aa		10.22	□□□□□ -0.77
SH3YL1-223	ENST00000481932	USP50	Q70EL3	339 aa	Predicted RBP	10.22	□□□□□ -0.77
SH3YL1-223	ENST00000481932	TMC4	Q7Z404	712 aa		10.22	□□□□□ -0.77
SH3YL1-223	ENST00000481932	PXYLP1	Q8TE99	480 aa		10.22	□□□□□ -0.77
SH3YL1-223	ENST00000481932	MBIP	Q9NS73	344 aa		10.22	□□□□□ -0.77
SH3YL1-223	ENST00000481932	GPRC5D	Q9NZD1	345 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms