RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 PUM3Q15397 648 aaKnown RBP13.43□□□□□ -0.26
ATG4B-219ENST00000479941 TXNRD3Q86VQ6 643 aa13.43□□□□□ -0.26
ATG4B-219ENST00000479941 L3MBTL3Q96JM7 780 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-219ENST00000479941 A0A1B0GUL6 1792 aa13.43□□□□□ -0.26
ATG4B-219ENST00000479941 IRS2Q9Y4H2 1338 aa13.42□□□□□ -0.26
ATG4B-219ENST00000479941 HMMRO75330 724 aa13.42□□□□□ -0.26
ATG4B-219ENST00000479941 RAD17O75943 681 aa13.42□□□□□ -0.26
ATG4B-219ENST00000479941 KLRK1P26718 216 aa13.42□□□□□ -0.26
ATG4B-219ENST00000479941 ZNF804AQ7Z570 1209 aa13.42□□□□□ -0.26
ATG4B-219ENST00000479941 LPIN2Q92539 896 aa13.42□□□□□ -0.26
ATG4B-219ENST00000479941 SUPT16HQ9Y5B9 1047 aaKnown RBP13.42□□□□□ -0.26
ATG4B-219ENST00000479941 GJA3Q9Y6H8 435 aa13.42□□□□□ -0.26
ATG4B-219ENST00000479941 IQCA1LA6NCM1 817 aa13.41□□□□□ -0.26
ATG4B-219ENST00000479941 SURF6O75683 361 aaKnown RBP13.41□□□□□ -0.26
ATG4B-219ENST00000479941 IFIT1P09914 478 aaKnown RBP13.41□□□□□ -0.26
ATG4B-219ENST00000479941 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-219ENST00000479941 FGFR2P21802 821 aa13.41□□□□□ -0.26
ATG4B-219ENST00000479941 CAVIN4Q5BKX8 364 aa13.41□□□□□ -0.26
ATG4B-219ENST00000479941 RRAGCQ9HB90 399 aa13.41□□□□□ -0.26
ATG4B-219ENST00000479941 CD209Q9NNX6 404 aa13.41□□□□□ -0.26
ATG4B-219ENST00000479941 NMRK2Q9NPI5 230 aa13.41□□□□□ -0.26
ATG4B-219ENST00000479941 NOP58Q9Y2X3 529 aaKnown RBP13.41□□□□□ -0.26
ATG4B-219ENST00000479941 WDR90Q96KV7 1748 aa13.4□□□□□ -0.26
ATG4B-219ENST00000479941 PSMD14O00487 310 aa13.4□□□□□ -0.26
ATG4B-219ENST00000479941 SLC5A1P13866 664 aa13.4□□□□□ -0.26
ATG4B-219ENST00000479941 IL1R1P14778 569 aa13.4□□□□□ -0.26
ATG4B-219ENST00000479941 HIBADHP31937 336 aaKnown RBP13.4□□□□□ -0.26
ATG4B-219ENST00000479941 ATP2B3Q16720 1220 aa13.4□□□□□ -0.26
ATG4B-219ENST00000479941 FAM84BQ96KN1 310 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-219ENST00000479941 CRBNQ96SW2 442 aa13.4□□□□□ -0.26
ATG4B-219ENST00000479941 KCNQ5Q9NR82 932 aa13.4□□□□□ -0.26
ATG4B-219ENST00000479941 AKAP2Q9Y2D5 859 aa13.4□□□□□ -0.26
ATG4B-219ENST00000479941 USP17L3A6NCW0 530 aa13.39□□□□□ -0.27
ATG4B-219ENST00000479941 USP17L4A6NCW7 530 aa13.39□□□□□ -0.27
ATG4B-219ENST00000479941 POTECB2RU33 542 aa13.39□□□□□ -0.27
ATG4B-219ENST00000479941 VIL1P09327 827 aaKnown RBP13.39□□□□□ -0.27
ATG4B-219ENST00000479941 RPS12P25398 132 aaKnown RBP13.39□□□□□ -0.27
ATG4B-219ENST00000479941 LMOD1P29536 600 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-219ENST00000479941 GYG1P46976 350 aa13.39□□□□□ -0.27
ATG4B-219ENST00000479941 TFCP2Q12800 502 aa13.39□□□□□ -0.27
ATG4B-219ENST00000479941 OS9Q13438 667 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-219ENST00000479941 AAMPQ13685 434 aa13.39□□□□□ -0.27
ATG4B-219ENST00000479941 HSP90AB4PQ58FF6 505 aa13.39□□□□□ -0.27
ATG4B-219ENST00000479941 STRIP1Q5VSL9 837 aa13.39□□□□□ -0.27
ATG4B-219ENST00000479941 USP17L1Q7RTZ2 530 aa13.39□□□□□ -0.27
ATG4B-219ENST00000479941 VPS37DQ86XT2 251 aa13.39□□□□□ -0.27
ATG4B-219ENST00000479941 SIRT2Q8IXJ6 389 aa13.39□□□□□ -0.27
ATG4B-219ENST00000479941 KIF3CO14782 793 aa13.38□□□□□ -0.27
ATG4B-219ENST00000479941 SASH1O94885 1247 aa13.38□□□□□ -0.27
ATG4B-219ENST00000479941 GMPSP49915 693 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-219ENST00000479941 SCNN1DP51172 638 aa13.38□□□□□ -0.27
ATG4B-219ENST00000479941 TTLL5Q6EMB2 1281 aa13.38□□□□□ -0.27
ATG4B-219ENST00000479941 FBXO33Q7Z6M2 555 aa13.38□□□□□ -0.27
ATG4B-219ENST00000479941 ERC1Q8IUD2 1116 aa13.38□□□□□ -0.27
ATG4B-219ENST00000479941 DPF2Q92785 391 aa13.38□□□□□ -0.27
ATG4B-219ENST00000479941 HACL1Q9UJ83 578 aa13.38□□□□□ -0.27
ATG4B-219ENST00000479941 A0A1B0GUL7 405 aa13.37□□□□□ -0.27
ATG4B-219ENST00000479941 RSBN1LQ6PCB5 846 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-219ENST00000479941 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-219ENST00000479941 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
ATG4B-219ENST00000479941 TDRD7Q8NHU6 1098 aaKnown RBP13.37□□□□□ -0.27
ATG4B-219ENST00000479941 GPR108Q9NPR9 543 aa13.37□□□□□ -0.27
ATG4B-219ENST00000479941 GPRC5DQ9NZD1 345 aa13.37□□□□□ -0.27
ATG4B-219ENST00000479941 SCN9AQ15858 1988 aa13.37□□□□□ -0.27
ATG4B-219ENST00000479941 MYO3BQ8WXR4 1341 aa13.37□□□□□ -0.27
ATG4B-219ENST00000479941 SCN4AP35499 1836 aa13.36□□□□□ -0.27
ATG4B-219ENST00000479941 BCAMP50895 628 aa13.36□□□□□ -0.27
ATG4B-219ENST00000479941 TIMM10P62072 90 aa13.36□□□□□ -0.27
ATG4B-219ENST00000479941 GTF2IP78347 998 aa13.36□□□□□ -0.27
ATG4B-219ENST00000479941 DACT2Q5SW24 774 aa13.36□□□□□ -0.27
ATG4B-219ENST00000479941 PNMA8AQ86V59 439 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-219ENST00000479941 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
ATG4B-219ENST00000479941 TAF1DQ9H5J8 278 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-219ENST00000479941 EXOC6BQ9Y2D4 811 aa13.36□□□□□ -0.27
ATG4B-219ENST00000479941 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-219ENST00000479941 ZNF609O15014 1411 aa13.36□□□□□ -0.27
ATG4B-219ENST00000479941 FRAT2O75474 233 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-219ENST00000479941 TOMM70O94826 608 aa13.35□□□□□ -0.27
ATG4B-219ENST00000479941 EPHX2P34913 555 aa13.35□□□□□ -0.27
ATG4B-219ENST00000479941 EPS15P42566 896 aa13.35□□□□□ -0.27
ATG4B-219ENST00000479941 FKBP1AP62942 108 aaKnown RBP13.35□□□□□ -0.27
ATG4B-219ENST00000479941 NEUROD6Q96NK8 337 aa13.35□□□□□ -0.27
ATG4B-219ENST00000479941 ADARB2Q9NS39 739 aaKnown RBP13.35□□□□□ -0.27
ATG4B-219ENST00000479941 GNL3LQ9NVN8 582 aaKnown RBP13.35□□□□□ -0.27
ATG4B-219ENST00000479941 CNOT7Q9UIV1 285 aaKnown RBP13.35□□□□□ -0.27
ATG4B-219ENST00000479941 FAM205AQ6ZU69 1335 aa13.35□□□□□ -0.27
ATG4B-219ENST00000479941 PSME4Q14997 1843 aa13.34□□□□□ -0.27
ATG4B-219ENST00000479941 H7C1D1 291 aa13.34□□□□□ -0.27
ATG4B-219ENST00000479941 ZBTB22O15209 634 aa13.34□□□□□ -0.27
ATG4B-219ENST00000479941 RAB11FIP3O75154 756 aa13.34□□□□□ -0.27
ATG4B-219ENST00000479941 MMP14P50281 582 aa13.34□□□□□ -0.27
ATG4B-219ENST00000479941 TNNI3KQ59H18 835 aa13.34□□□□□ -0.27
ATG4B-219ENST00000479941 USP50Q70EL3 339 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-219ENST00000479941 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
ATG4B-219ENST00000479941 XAGE2Q96GT9 111 aa13.34□□□□□ -0.27
ATG4B-219ENST00000479941 GMLQ99445 158 aa13.34□□□□□ -0.27
ATG4B-219ENST00000479941 PCDHB15Q9Y5E8 787 aa13.34□□□□□ -0.27
ATG4B-219ENST00000479941 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-219ENST00000479941 FPGT-TNNI3KV9GXZ4 949 aa13.34□□□□□ -0.27
ATG4B-219ENST00000479941 SEMA3EO15041 775 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms