RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 SZT2Q5T011 3432 aa20.15■□□□□ 0.82
HDLBP-238ENST00000479894 EN2P19622 333 aaPredicted RBP20.15■□□□□ 0.82
HDLBP-238ENST00000479894 ANKRD13DQ6ZTN6 518 aa20.15■□□□□ 0.82
HDLBP-238ENST00000479894 OGFOD1Q8N543 542 aa20.15■□□□□ 0.82
HDLBP-238ENST00000479894 ECM29Q5VYK3 1845 aa20.14■□□□□ 0.81
HDLBP-238ENST00000479894 COL1A1P02452 1464 aaPredicted RBP20.14■□□□□ 0.81
HDLBP-238ENST00000479894 XDHP47989 1333 aa20.14■□□□□ 0.81
HDLBP-238ENST00000479894 MYO3BQ8WXR4 1341 aa20.14■□□□□ 0.81
HDLBP-238ENST00000479894 MAPK8IP3Q9UPT6 1336 aa20.14■□□□□ 0.81
HDLBP-238ENST00000479894 ZBTB48P10074 688 aaPredicted RBP20.14■□□□□ 0.81
HDLBP-238ENST00000479894 APOBEC3FQ8IUX4 373 aaKnown RBP20.13■□□□□ 0.81
HDLBP-238ENST00000479894 TMEM106CQ9BVX2 250 aa20.13■□□□□ 0.81
HDLBP-238ENST00000479894 UNCXA6NJT0 531 aa20.12■□□□□ 0.81
HDLBP-238ENST00000479894 ATP5J2-PTCD1G3V325 749 aa20.12■□□□□ 0.81
HDLBP-238ENST00000479894 ATP2B4P23634 1241 aa20.12■□□□□ 0.81
HDLBP-238ENST00000479894 MAP3K11Q16584 847 aa20.12■□□□□ 0.81
HDLBP-238ENST00000479894 ZNF428Q96B54 188 aa20.12■□□□□ 0.81
HDLBP-238ENST00000479894 SEC31BQ9NQW1 1179 aa20.12■□□□□ 0.81
HDLBP-238ENST00000479894 ZBTB38Q8NAP3 1195 aaPredicted RBP20.11■□□□□ 0.81
HDLBP-238ENST00000479894 EFCC1Q9HA90 598 aa20.11■□□□□ 0.81
HDLBP-238ENST00000479894 CHPF2Q9P2E5 772 aa20.11■□□□□ 0.81
HDLBP-238ENST00000479894 ANGEL1Q9UNK9 670 aaKnown RBP20.11■□□□□ 0.81
HDLBP-238ENST00000479894 CCDC152Q4G0S7 254 aa20.1■□□□□ 0.81
HDLBP-238ENST00000479894 RTL5Q5HYW3 569 aaPredicted RBP20.1■□□□□ 0.81
HDLBP-238ENST00000479894 DACT2Q5SW24 774 aa20.1■□□□□ 0.81
HDLBP-238ENST00000479894 OTUD7BQ6GQQ9 843 aa20.1■□□□□ 0.81
HDLBP-238ENST00000479894 CD99L2Q8TCZ2 262 aa20.1■□□□□ 0.81
HDLBP-238ENST00000479894 SLC10A4Q96EP9 437 aa20.1■□□□□ 0.81
HDLBP-238ENST00000479894 MYH3P11055 1940 aa20.1■□□□□ 0.81
HDLBP-238ENST00000479894 MED23Q9ULK4 1368 aa20.09■□□□□ 0.81
HDLBP-238ENST00000479894 IGF2BP3O00425 579 aaKnown RBP eCLIP20.09■□□□□ 0.81
HDLBP-238ENST00000479894 PRKG1Q13976 671 aa20.09■□□□□ 0.81
HDLBP-238ENST00000479894 STRIP1Q5VSL9 837 aa20.09■□□□□ 0.81
HDLBP-238ENST00000479894 MIER1Q8N108 512 aa20.09■□□□□ 0.81
HDLBP-238ENST00000479894 OTUD5Q96G74 571 aa20.09■□□□□ 0.81
HDLBP-238ENST00000479894 ZNF333Q96JL9 665 aa20.09■□□□□ 0.81
HDLBP-238ENST00000479894 DBF4Q9UBU7 674 aaPredicted RBP20.09■□□□□ 0.81
HDLBP-238ENST00000479894 HOXB7P09629 217 aa20.08■□□□□ 0.81
HDLBP-238ENST00000479894 LMOD3Q0VAK6 560 aa20.08■□□□□ 0.81
HDLBP-238ENST00000479894 WNK4Q96J92 1243 aa20.08■□□□□ 0.81
HDLBP-238ENST00000479894 RIPK4P57078 832 aa20.07■□□□□ 0.8
HDLBP-238ENST00000479894 SP3Q02447 781 aa20.07■□□□□ 0.8
HDLBP-238ENST00000479894 NBPF11Q86T75 865 aa20.07■□□□□ 0.8
HDLBP-238ENST00000479894 ANKRD18AQ8IVF6 992 aa20.07■□□□□ 0.8
HDLBP-238ENST00000479894 SPEF2Q9C093 1822 aa20.06■□□□□ 0.8
HDLBP-238ENST00000479894 DLL1O00548 723 aa20.06■□□□□ 0.8
HDLBP-238ENST00000479894 PPP1R12BO60237 982 aaPredicted RBP20.06■□□□□ 0.8
HDLBP-238ENST00000479894 CRHR2Q13324 411 aa20.06■□□□□ 0.8
HDLBP-238ENST00000479894 ARHGEF6Q15052 776 aa20.06■□□□□ 0.8
HDLBP-238ENST00000479894 HDGFL1Q5TGJ6 251 aa20.06■□□□□ 0.8
HDLBP-238ENST00000479894 ZBED3Q96IU2 234 aaPredicted RBP20.06■□□□□ 0.8
HDLBP-238ENST00000479894 HYPKQ9NX55 129 aa20.06■□□□□ 0.8
HDLBP-238ENST00000479894 PDE8AO60658 829 aa20.05■□□□□ 0.8
HDLBP-238ENST00000479894 SASH1O94885 1247 aa20.05■□□□□ 0.8
HDLBP-238ENST00000479894 COA1Q9GZY4 146 aa20.05■□□□□ 0.8
HDLBP-238ENST00000479894 PPP2R3BQ9Y5P8 575 aa20.05■□□□□ 0.8
HDLBP-238ENST00000479894 TESPA1A2RU30 521 aaPredicted RBP20.04■□□□□ 0.8
HDLBP-238ENST00000479894 H0YGN5 161 aa20.04■□□□□ 0.8
HDLBP-238ENST00000479894 MXD3Q9BW11 206 aa20.04■□□□□ 0.8
HDLBP-238ENST00000479894 ADAMTS8Q9UP79 889 aa20.04■□□□□ 0.8
HDLBP-238ENST00000479894 CHL1O00533 1208 aa20.03■□□□□ 0.8
HDLBP-238ENST00000479894 PCCAP05165 728 aaPredicted RBP20.03■□□□□ 0.8
HDLBP-238ENST00000479894 KRT24Q2M2I5 525 aa20.03■□□□□ 0.8
HDLBP-238ENST00000479894 RUNDC1Q96C34 613 aa20.03■□□□□ 0.8
HDLBP-238ENST00000479894 DEFB129Q9H1M3 183 aa20.03■□□□□ 0.8
HDLBP-238ENST00000479894 CUL9Q8IWT3 2517 aa20.02■□□□□ 0.8
HDLBP-238ENST00000479894 SLC9C1Q4G0N8 1177 aa20.02■□□□□ 0.8
HDLBP-238ENST00000479894 CCDC191Q8NCU4 936 aa20.02■□□□□ 0.8
HDLBP-238ENST00000479894 CDC5LQ99459 802 aaKnown RBP20.02■□□□□ 0.8
HDLBP-238ENST00000479894 SSC5DA1L4H1 1573 aa20.02■□□□□ 0.8
HDLBP-238ENST00000479894 RANBP2P49792 3224 aaKnown RBP20.01■□□□□ 0.79
HDLBP-238ENST00000479894 SLC4A8Q2Y0W8 1093 aa20.01■□□□□ 0.79
HDLBP-238ENST00000479894 SLC17A8Q8NDX2 589 aa20.01■□□□□ 0.79
HDLBP-238ENST00000479894 FBXW7Q969H0 707 aa20.01■□□□□ 0.79
HDLBP-238ENST00000479894 CLMNQ96JQ2 1002 aa20.01■□□□□ 0.79
HDLBP-238ENST00000479894 FZD1Q9UP38 647 aa20.01■□□□□ 0.79
HDLBP-238ENST00000479894 OTOFQ9HC10 1997 aa20.01■□□□□ 0.79
HDLBP-238ENST00000479894 TMPOP42166 694 aaKnown RBP20■□□□□ 0.79
HDLBP-238ENST00000479894 CCT4P50991 539 aaKnown RBP20■□□□□ 0.79
HDLBP-238ENST00000479894 CAP1Q01518 475 aa20■□□□□ 0.79
HDLBP-238ENST00000479894 SUPT20HL1Q3ZLR7 823 aa20■□□□□ 0.79
HDLBP-238ENST00000479894 CCDC184Q52MB2 194 aa20■□□□□ 0.79
HDLBP-238ENST00000479894 TTLL5Q6EMB2 1281 aa20■□□□□ 0.79
HDLBP-238ENST00000479894 RIC3Q7Z5B4 369 aa20■□□□□ 0.79
HDLBP-238ENST00000479894 BSDC1Q9NW68 430 aaPredicted RBP20■□□□□ 0.79
HDLBP-238ENST00000479894 MINPP1Q9UNW1 487 aa20■□□□□ 0.79
HDLBP-238ENST00000479894 GOLGA2Q08379 1002 aa19.99■□□□□ 0.79
HDLBP-238ENST00000479894 CHRDL2Q6WN34 429 aa19.99■□□□□ 0.79
HDLBP-238ENST00000479894 FAM9BQ8IZU0 186 aa19.99■□□□□ 0.79
HDLBP-238ENST00000479894 MTMR14Q8NCE2 650 aa19.99■□□□□ 0.79
HDLBP-238ENST00000479894 PTPN18Q99952 460 aa19.99■□□□□ 0.79
HDLBP-238ENST00000479894 PTCH2Q9Y6C5 1203 aa19.99■□□□□ 0.79
HDLBP-238ENST00000479894 IREB2P48200 963 aaKnown RBP19.98■□□□□ 0.79
HDLBP-238ENST00000479894 KIAA0825Q8IV33 1275 aa19.98■□□□□ 0.79
HDLBP-238ENST00000479894 ANKRD13AQ8IZ07 590 aa19.98■□□□□ 0.79
HDLBP-238ENST00000479894 CCDC85AQ96PX6 553 aaPredicted RBP19.98■□□□□ 0.79
HDLBP-238ENST00000479894 LEMD3Q9Y2U8 911 aa19.98■□□□□ 0.79
HDLBP-238ENST00000479894 ZNF804BA4D1E1 1349 aa19.98■□□□□ 0.79
HDLBP-238ENST00000479894 WTIPA6NIX2 430 aaPredicted RBP19.97■□□□□ 0.79
HDLBP-238ENST00000479894 GJA5P36382 358 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms