RNA–Protein interactions for RNA: ENST00000478516.1

PFKFB4-212, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 3

Gene PFKFB4, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-212ENST00000478516 BECN1Q14457 450 aa10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 TRAPPC3LQ5T215 181 aa10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 INTS5Q6P9B9 1019 aaKnown RBP10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 TICAM2Q86XR7 235 aa10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 ZNF526Q8TF50 670 aaPredicted RBP10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 IL17RAQ96F46 866 aa10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 ZBTB3Q9H5J0 574 aa10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 IL1RAPL2Q9NP60 686 aa10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 GPR108Q9NPR9 543 aa10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 ZBTB1Q9Y2K1 713 aa10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 RTCBQ9Y3I0 505 aaKnown RBP10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 TJP1Q07157 1748 aa10.64□□□□□ -0.71
PFKFB4-212ENST00000478516 ERC2O15083 957 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 REC8O95072 547 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 CSF1RP07333 972 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 HSPA6P17066 643 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 TGFB2P61812 414 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 NLGN1Q8N2Q7 840 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 ZBTB38Q8NAP3 1195 aaPredicted RBP10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 SNX21Q969T3 373 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 USP26Q9BXU7 913 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 ECHDC1Q9NTX5 307 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 CCDC87Q9NVE4 849 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 WWC3Q9ULE0 1092 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 PA2G4Q9UQ80 394 aaKnown RBP10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 PCDHGA4Q9Y5G9 962 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 CEP350Q5VT06 3117 aa10.63□□□□□ -0.71
PFKFB4-212ENST00000478516 ARHGAP33O14559 1287 aa10.62□□□□□ -0.71
PFKFB4-212ENST00000478516 KIF3CO14782 793 aa10.62□□□□□ -0.71
PFKFB4-212ENST00000478516 CIAO1O76071 339 aa10.62□□□□□ -0.71
PFKFB4-212ENST00000478516 MMP10P09238 476 aa10.62□□□□□ -0.71
PFKFB4-212ENST00000478516 CHMLP26374 656 aa10.62□□□□□ -0.71
PFKFB4-212ENST00000478516 OS9Q13438 667 aaPredicted RBP10.62□□□□□ -0.71
PFKFB4-212ENST00000478516 ADGRD1Q6QNK2 874 aa10.62□□□□□ -0.71
PFKFB4-212ENST00000478516 LMBR1LQ6UX01 489 aa10.62□□□□□ -0.71
PFKFB4-212ENST00000478516 NLRP10Q86W26 655 aa10.62□□□□□ -0.71
PFKFB4-212ENST00000478516 ZNF34Q8IZ26 560 aa10.62□□□□□ -0.71
PFKFB4-212ENST00000478516 KIF2CQ99661 725 aa10.62□□□□□ -0.71
PFKFB4-212ENST00000478516 SLC34A2O95436 690 aa10.61□□□□□ -0.71
PFKFB4-212ENST00000478516 RC3H1Q5TC82 1133 aaKnown RBP10.61□□□□□ -0.71
PFKFB4-212ENST00000478516 NUTM1Q86Y26 1132 aa10.61□□□□□ -0.71
PFKFB4-212ENST00000478516 EAF2Q96CJ1 260 aaPredicted RBP10.61□□□□□ -0.71
PFKFB4-212ENST00000478516 GPATCH3Q96I76 525 aa10.61□□□□□ -0.71
PFKFB4-212ENST00000478516 CNTNAP4Q9C0A0 1308 aa10.6□□□□□ -0.71
PFKFB4-212ENST00000478516 IFIT2P09913 472 aaKnown RBP10.6□□□□□ -0.71
PFKFB4-212ENST00000478516 RFC4P35249 363 aa10.6□□□□□ -0.71
PFKFB4-212ENST00000478516 IL15P40933 162 aaPredicted RBP10.6□□□□□ -0.71
PFKFB4-212ENST00000478516 CRKLP46109 303 aaKnown RBP10.6□□□□□ -0.71
PFKFB4-212ENST00000478516 HLFQ16534 295 aa10.6□□□□□ -0.71
PFKFB4-212ENST00000478516 CLEC4GQ6UXB4 293 aa10.6□□□□□ -0.71
PFKFB4-212ENST00000478516 DZIP3Q86Y13 1208 aaKnown RBP10.6□□□□□ -0.71
PFKFB4-212ENST00000478516 CNTROBQ8N137 903 aa10.6□□□□□ -0.71
PFKFB4-212ENST00000478516 ESYT1Q9BSJ8 1104 aa10.6□□□□□ -0.71
PFKFB4-212ENST00000478516 AFDNP55196 1824 aaKnown RBP10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 A0A0G2JLW4 131 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 EYA2O00167 538 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 RPS6KA4O75676 772 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 PARP10Q53GL7 1025 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 TNNI3KQ59H18 835 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 ATG9AQ7Z3C6 839 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 AACSQ86V21 672 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 KRI1Q8N9T8 703 aaKnown RBP10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 EVI5LQ96CN4 794 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 DDX27Q96GQ7 796 aaKnown RBP10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 TBC1D2Q9BYX2 928 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 SNRKQ9NRH2 765 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 BCS1LQ9Y276 419 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 FPGT-TNNI3KV9GXZ4 949 aa10.59□□□□□ -0.71
PFKFB4-212ENST00000478516 KIF13BQ9NQT8 1826 aa10.58□□□□□ -0.72
PFKFB4-212ENST00000478516 CAMTA2O94983 1202 aa10.58□□□□□ -0.72
PFKFB4-212ENST00000478516 ATP5JP18859 108 aa10.58□□□□□ -0.72
PFKFB4-212ENST00000478516 ANAPC15P60006 121 aa10.58□□□□□ -0.72
PFKFB4-212ENST00000478516 MFSD10Q14728 455 aa10.58□□□□□ -0.72
PFKFB4-212ENST00000478516 RABEP1Q15276 862 aa10.58□□□□□ -0.72
PFKFB4-212ENST00000478516 ARHGAP27Q6ZUM4 889 aa10.58□□□□□ -0.72
PFKFB4-212ENST00000478516 GPIHBP1Q8IV16 184 aa10.58□□□□□ -0.72
PFKFB4-212ENST00000478516 ANP32EQ9BTT0 268 aa10.58□□□□□ -0.72
PFKFB4-212ENST00000478516 PARP3Q9Y6F1 533 aa10.58□□□□□ -0.72
PFKFB4-212ENST00000478516 RFX7Q2KHR2 1363 aa10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 TRIM6-TRIM34B2RNG4 842 aa10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 HIP1O00291 1037 aa10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 SGSM2O43147 1006 aa10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 TOMM70O94826 608 aa10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 GYS1P13807 737 aa10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 HSP90B1P14625 803 aaKnown RBP10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 APLP1P51693 650 aa10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 TSHZ3Q63HK5 1081 aa10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 TTLL11Q8NHH1 800 aa10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 KLHDC4Q8TBB5 520 aa10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 JARID2Q92833 1246 aaPredicted RBP10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 ARIH1Q9Y4X5 557 aaPredicted RBP10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.57□□□□□ -0.72
PFKFB4-212ENST00000478516 RTL9Q8NET4 1388 aa10.56□□□□□ -0.72
PFKFB4-212ENST00000478516 PDE8AO60658 829 aa10.56□□□□□ -0.72
PFKFB4-212ENST00000478516 DPEP1P16444 411 aa10.56□□□□□ -0.72
PFKFB4-212ENST00000478516 TFCP2Q12800 502 aa10.56□□□□□ -0.72
PFKFB4-212ENST00000478516 CCDC57Q2TAC2 916 aa10.56□□□□□ -0.72
PFKFB4-212ENST00000478516 RILPL2Q969X0 211 aa10.56□□□□□ -0.72
PFKFB4-212ENST00000478516 FAM89AQ96GI7 184 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms