RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 SCRN1Q12765 414 aa24.42■■□□□ 1.5
TMED4-204ENST00000477639 RESTQ13127 1097 aa24.42■■□□□ 1.5
TMED4-204ENST00000477639 CCDC57Q2TAC2 916 aa24.42■■□□□ 1.5
TMED4-204ENST00000477639 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.42■■□□□ 1.5
TMED4-204ENST00000477639 VSIG10Q8N0Z9 540 aa24.42■■□□□ 1.5
TMED4-204ENST00000477639 LLPHQ9BRT6 129 aaKnown RBP24.42■■□□□ 1.5
TMED4-204ENST00000477639 TEX13AQ9BXU3 409 aaPredicted RBP24.42■■□□□ 1.5
TMED4-204ENST00000477639 LRRC2Q9BYS8 371 aa24.42■■□□□ 1.5
TMED4-204ENST00000477639 AGXT2Q9BYV1 514 aa24.42■■□□□ 1.5
TMED4-204ENST00000477639 USP25Q9UHP3 1055 aa24.42■■□□□ 1.5
TMED4-204ENST00000477639 EP400Q96L91 3159 aa24.42■■□□□ 1.5
TMED4-204ENST00000477639 LIG1P18858 919 aa24.42■■□□□ 1.5
TMED4-204ENST00000477639 LAMA4Q16363 1823 aa24.41■■□□□ 1.5
TMED4-204ENST00000477639 CSF1RP07333 972 aa24.41■■□□□ 1.5
TMED4-204ENST00000477639 DNAJC10Q8IXB1 793 aa24.41■■□□□ 1.5
TMED4-204ENST00000477639 LEO1Q8WVC0 666 aaPredicted RBP24.41■■□□□ 1.5
TMED4-204ENST00000477639 PIGBQ92521 554 aa24.41■■□□□ 1.5
TMED4-204ENST00000477639 TFIP11Q9UBB9 837 aaKnown RBP24.41■■□□□ 1.5
TMED4-204ENST00000477639 ASAP1Q9ULH1 1129 aa24.41■■□□□ 1.5
TMED4-204ENST00000477639 A0A0G2JLW4 131 aa24.4■■□□□ 1.5
TMED4-204ENST00000477639 E7EWF7 191 aa24.4■■□□□ 1.5
TMED4-204ENST00000477639 M0R2C6 588 aa24.4■■□□□ 1.5
TMED4-204ENST00000477639 KDM4AO75164 1064 aa24.4■■□□□ 1.5
TMED4-204ENST00000477639 KRT27Q7Z3Y8 459 aa24.4■■□□□ 1.5
TMED4-204ENST00000477639 UPF1Q92900 1129 aaKnown RBP eCLIP24.4■■□□□ 1.5
TMED4-204ENST00000477639 SPATA32Q96LK8 384 aa24.4■■□□□ 1.5
TMED4-204ENST00000477639 AKAP2Q9Y2D5 859 aa24.4■■□□□ 1.5
TMED4-204ENST00000477639 THSD7AQ9UPZ6 1657 aa24.39■■□□□ 1.5
TMED4-204ENST00000477639 ADCY5O95622 1261 aa24.39■■□□□ 1.49
TMED4-204ENST00000477639 PTMAP06454 111 aaKnown RBP24.39■■□□□ 1.49
TMED4-204ENST00000477639 ADORA1P30542 326 aa24.39■■□□□ 1.49
TMED4-204ENST00000477639 KIF6Q6ZMV9 814 aa24.39■■□□□ 1.49
TMED4-204ENST00000477639 ZBTB38Q8NAP3 1195 aaPredicted RBP24.38■■□□□ 1.49
TMED4-204ENST00000477639 NSUN7Q8NE18 718 aaKnown RBP24.38■■□□□ 1.49
TMED4-204ENST00000477639 FAM89AQ96GI7 184 aa24.38■■□□□ 1.49
TMED4-204ENST00000477639 XAGE2Q96GT9 111 aa24.38■■□□□ 1.49
TMED4-204ENST00000477639 FGD1P98174 961 aa24.38■■□□□ 1.49
TMED4-204ENST00000477639 CCDC158Q5M9N0 1113 aa24.38■■□□□ 1.49
TMED4-204ENST00000477639 BARGINQ6ZT62 677 aa24.38■■□□□ 1.49
TMED4-204ENST00000477639 OSBP2Q969R2 916 aa24.38■■□□□ 1.49
TMED4-204ENST00000477639 DDX11Q96FC9 970 aa24.38■■□□□ 1.49
TMED4-204ENST00000477639 CTDNEP1O95476 244 aa24.37■■□□□ 1.49
TMED4-204ENST00000477639 APOBRQ0VD83 1088 aa24.37■■□□□ 1.49
TMED4-204ENST00000477639 NUP62CLQ9H1M0 184 aa24.37■■□□□ 1.49
TMED4-204ENST00000477639 ZSCAN16Q9H4T2 348 aaPredicted RBP24.37■■□□□ 1.49
TMED4-204ENST00000477639 THRAP3Q9Y2W1 955 aaKnown RBP24.37■■□□□ 1.49
TMED4-204ENST00000477639 ZNF330Q9Y3S2 320 aaPredicted RBP24.37■■□□□ 1.49
TMED4-204ENST00000477639 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.37■■□□□ 1.49
TMED4-204ENST00000477639 TPM2P07951 284 aa24.36■■□□□ 1.49
TMED4-204ENST00000477639 CCDC192P0DO97 292 aa24.36■■□□□ 1.49
TMED4-204ENST00000477639 TTC39AQ5SRH9 613 aa24.36■■□□□ 1.49
TMED4-204ENST00000477639 FAM182BQ5T319 152 aa24.36■■□□□ 1.49
TMED4-204ENST00000477639 MAP3K15Q6ZN16 1313 aa24.36■■□□□ 1.49
TMED4-204ENST00000477639 FKBP4Q02790 459 aaKnown RBP eCLIP24.36■■□□□ 1.49
TMED4-204ENST00000477639 MAP3K11Q16584 847 aa24.36■■□□□ 1.49
TMED4-204ENST00000477639 H3BQV1 296 aa24.35■■□□□ 1.49
TMED4-204ENST00000477639 STARD3NLO95772 234 aa24.35■■□□□ 1.49
TMED4-204ENST00000477639 IFFO2Q5TF58 517 aa24.35■■□□□ 1.49
TMED4-204ENST00000477639 GIGYF2Q6Y7W6 1299 aaKnown RBP24.35■■□□□ 1.49
TMED4-204ENST00000477639 PGBD1Q96JS3 809 aa24.35■■□□□ 1.49
TMED4-204ENST00000477639 CDHR2Q9BYE9 1310 aa24.35■■□□□ 1.49
TMED4-204ENST00000477639 TERF1P54274 439 aa24.34■■□□□ 1.49
TMED4-204ENST00000477639 LRRFIP1Q32MZ4 808 aaKnown RBP24.34■■□□□ 1.49
TMED4-204ENST00000477639 GORABQ5T7V8 394 aa24.34■■□□□ 1.49
TMED4-204ENST00000477639 NAA16Q6N069 864 aaPredicted RBP24.34■■□□□ 1.49
TMED4-204ENST00000477639 DACT1Q9NYF0 836 aa24.34■■□□□ 1.49
TMED4-204ENST00000477639 GOLGA6L4A6NEF3 574 aa24.34■■□□□ 1.49
TMED4-204ENST00000477639 FOXP2O15409 715 aa24.34■■□□□ 1.49
TMED4-204ENST00000477639 ZFYP08048 801 aaPredicted RBP24.34■■□□□ 1.49
TMED4-204ENST00000477639 IFIT5Q13325 482 aaKnown RBP24.34■■□□□ 1.49
TMED4-204ENST00000477639 SCARF1Q14162 830 aa24.34■■□□□ 1.49
TMED4-204ENST00000477639 TTLL5Q6EMB2 1281 aa24.34■■□□□ 1.49
TMED4-204ENST00000477639 CCDC85AQ96PX6 553 aaPredicted RBP24.34■■□□□ 1.49
TMED4-204ENST00000477639 AP5Z1O43299 807 aa24.33■■□□□ 1.49
TMED4-204ENST00000477639 HMGN5P82970 282 aaKnown RBP24.33■■□□□ 1.49
TMED4-204ENST00000477639 FBXL16Q8N461 479 aa24.33■■□□□ 1.49
TMED4-204ENST00000477639 ZNF274Q96GC6 653 aaPredicted RBP24.33■■□□□ 1.49
TMED4-204ENST00000477639 DDX19AQ9NUU7 478 aaKnown RBP24.33■■□□□ 1.49
TMED4-204ENST00000477639 ABCC12Q96J65 1359 aa24.33■■□□□ 1.49
TMED4-204ENST00000477639 PTPDC1A2A3K4 754 aa24.33■■□□□ 1.48
TMED4-204ENST00000477639 ADD1P35611 737 aaKnown RBP24.33■■□□□ 1.48
TMED4-204ENST00000477639 TAF7LQ5H9L4 462 aa24.33■■□□□ 1.48
TMED4-204ENST00000477639 RBM43Q6ZSC3 357 aaKnown RBP24.33■■□□□ 1.48
TMED4-204ENST00000477639 CLSTN2Q9H4D0 955 aa24.33■■□□□ 1.48
TMED4-204ENST00000477639 SALL1Q9NSC2 1324 aa24.32■■□□□ 1.48
TMED4-204ENST00000477639 PDIA3P30101 505 aaKnown RBP24.32■■□□□ 1.48
TMED4-204ENST00000477639 HLFQ16534 295 aa24.32■■□□□ 1.48
TMED4-204ENST00000477639 CAMK4Q16566 473 aa24.32■■□□□ 1.48
TMED4-204ENST00000477639 NLRP10Q86W26 655 aa24.32■■□□□ 1.48
TMED4-204ENST00000477639 SYNE4Q8N205 404 aa24.32■■□□□ 1.48
TMED4-204ENST00000477639 RIPOR2Q9Y4F9 1068 aa24.32■■□□□ 1.48
TMED4-204ENST00000477639 MRVI1Q9Y6F6 885 aa24.32■■□□□ 1.48
TMED4-204ENST00000477639 RIC1Q4ADV7 1423 aa24.32■■□□□ 1.48
TMED4-204ENST00000477639 ZAP70P43403 619 aa24.31■■□□□ 1.48
TMED4-204ENST00000477639 TYRO3Q06418 890 aa24.31■■□□□ 1.48
TMED4-204ENST00000477639 CTNNA3Q9UI47 895 aa24.31■■□□□ 1.48
TMED4-204ENST00000477639 CFAP45Q9UL16 551 aa24.31■■□□□ 1.48
TMED4-204ENST00000477639 EVCP57679 992 aa24.31■■□□□ 1.48
TMED4-204ENST00000477639 CCT2P78371 535 aaKnown RBP24.31■■□□□ 1.48
TMED4-204ENST00000477639 TNMDQ9H2S6 317 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms