RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 KLRK1P26718 216 aa17.48■□□□□ 0.39
COL4A6-206ENST00000477085 ZNF589Q86UQ0 364 aaPredicted RBP17.48■□□□□ 0.39
COL4A6-206ENST00000477085 SEC62Q99442 399 aaKnown RBP17.48■□□□□ 0.39
COL4A6-206ENST00000477085 PALD1Q9ULE6 856 aa17.48■□□□□ 0.39
COL4A6-206ENST00000477085 RFX7Q2KHR2 1363 aa17.48■□□□□ 0.39
COL4A6-206ENST00000477085 HOXA10P31260 410 aaPredicted RBP17.48■□□□□ 0.39
COL4A6-206ENST00000477085 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
COL4A6-206ENST00000477085 RUFY2Q8WXA3 655 aa17.48■□□□□ 0.39
COL4A6-206ENST00000477085 BRIP1Q9BX63 1249 aa17.48■□□□□ 0.39
COL4A6-206ENST00000477085 HMG20BQ9P0W2 317 aa17.48■□□□□ 0.39
COL4A6-206ENST00000477085 AKAP11Q9UKA4 1901 aa17.47■□□□□ 0.39
COL4A6-206ENST00000477085 MED23Q9ULK4 1368 aa17.47■□□□□ 0.39
COL4A6-206ENST00000477085 RASGRF1Q13972 1273 aa17.47■□□□□ 0.39
COL4A6-206ENST00000477085 RPGRQ92834 1020 aaKnown RBP17.47■□□□□ 0.39
COL4A6-206ENST00000477085 PARP3Q9Y6F1 533 aa17.47■□□□□ 0.39
COL4A6-206ENST00000477085 GYG1P46976 350 aa17.46■□□□□ 0.39
COL4A6-206ENST00000477085 ANKRD31Q8N7Z5 1873 aa17.46■□□□□ 0.39
COL4A6-206ENST00000477085 TBC1D2Q9BYX2 928 aa17.46■□□□□ 0.39
COL4A6-206ENST00000477085 PIH1D3Q9NQM4 214 aaKnown RBP17.46■□□□□ 0.39
COL4A6-206ENST00000477085 RAD50Q92878 1312 aa17.46■□□□□ 0.39
COL4A6-206ENST00000477085 IRS2Q9Y4H2 1338 aa17.46■□□□□ 0.39
COL4A6-206ENST00000477085 UQCRFS1P1P0C7P4 283 aa17.45■□□□□ 0.38
COL4A6-206ENST00000477085 RBM17Q96I25 401 aaKnown RBP17.45■□□□□ 0.38
COL4A6-206ENST00000477085 ZNF804BA4D1E1 1349 aa17.45■□□□□ 0.38
COL4A6-206ENST00000477085 EPB41L2O43491 1005 aaKnown RBP17.45■□□□□ 0.38
COL4A6-206ENST00000477085 CD2BP2O95400 341 aaKnown RBP17.45■□□□□ 0.38
COL4A6-206ENST00000477085 HSPA4P34932 840 aa17.45■□□□□ 0.38
COL4A6-206ENST00000477085 CCDC129Q6ZRS4 1044 aa17.45■□□□□ 0.38
COL4A6-206ENST00000477085 SPATA5Q8NB90 893 aa17.45■□□□□ 0.38
COL4A6-206ENST00000477085 FAM84BQ96KN1 310 aaPredicted RBP17.45■□□□□ 0.38
COL4A6-206ENST00000477085 ANKRD2Q9GZV1 360 aa17.45■□□□□ 0.38
COL4A6-206ENST00000477085 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
COL4A6-206ENST00000477085 RNF113AO15541 343 aaKnown RBP17.44■□□□□ 0.38
COL4A6-206ENST00000477085 SRGNP10124 158 aa17.44■□□□□ 0.38
COL4A6-206ENST00000477085 ZMYM1Q5SVZ6 1142 aa17.44■□□□□ 0.38
COL4A6-206ENST00000477085 TXNRD3Q86VQ6 643 aa17.44■□□□□ 0.38
COL4A6-206ENST00000477085 CRAMP1Q96RY5 1269 aa17.44■□□□□ 0.38
COL4A6-206ENST00000477085 MCMDC2Q4G0Z9 681 aa17.43■□□□□ 0.38
COL4A6-206ENST00000477085 FBXO33Q7Z6M2 555 aa17.43■□□□□ 0.38
COL4A6-206ENST00000477085 TICAM2Q86XR7 235 aa17.43■□□□□ 0.38
COL4A6-206ENST00000477085 MAP4K1Q92918 833 aa17.43■□□□□ 0.38
COL4A6-206ENST00000477085 IL17RAQ96F46 866 aa17.43■□□□□ 0.38
COL4A6-206ENST00000477085 CCDC171Q6TFL3 1326 aa17.43■□□□□ 0.38
COL4A6-206ENST00000477085 GPSM2P81274 684 aa17.43■□□□□ 0.38
COL4A6-206ENST00000477085 KIAA1211Q6ZU35 1233 aa17.43■□□□□ 0.38
COL4A6-206ENST00000477085 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
COL4A6-206ENST00000477085 RASEFQ8IZ41 740 aa17.43■□□□□ 0.38
COL4A6-206ENST00000477085 OSBP2Q969R2 916 aa17.43■□□□□ 0.38
COL4A6-206ENST00000477085 IQSEC3Q9UPP2 1182 aaPredicted RBP17.43■□□□□ 0.38
COL4A6-206ENST00000477085 BBOX1O75936 387 aa17.42■□□□□ 0.38
COL4A6-206ENST00000477085 COL1A1P02452 1464 aaPredicted RBP17.42■□□□□ 0.38
COL4A6-206ENST00000477085 M0R2C6 588 aa17.41■□□□□ 0.38
COL4A6-206ENST00000477085 NECTIN1Q15223 517 aa17.41■□□□□ 0.38
COL4A6-206ENST00000477085 HELLSQ9NRZ9 838 aa17.41■□□□□ 0.38
COL4A6-206ENST00000477085 KCNJ4P48050 445 aa17.4■□□□□ 0.38
COL4A6-206ENST00000477085 SNX21Q969T3 373 aa17.4■□□□□ 0.38
COL4A6-206ENST00000477085 GPR101Q96P66 508 aaPredicted RBP17.4■□□□□ 0.38
COL4A6-206ENST00000477085 ANKIB1Q9P2G1 1089 aa17.4■□□□□ 0.38
COL4A6-206ENST00000477085 MAST3O60307 1309 aa17.4■□□□□ 0.38
COL4A6-206ENST00000477085 PDE6BP35913 854 aa17.4■□□□□ 0.38
COL4A6-206ENST00000477085 ANAPC15P60006 121 aa17.4■□□□□ 0.38
COL4A6-206ENST00000477085 RABEP1Q15276 862 aa17.4■□□□□ 0.38
COL4A6-206ENST00000477085 TTF1Q15361 905 aaPredicted RBP17.4■□□□□ 0.38
COL4A6-206ENST00000477085 VPS53Q5VIR6 699 aa17.4■□□□□ 0.38
COL4A6-206ENST00000477085 KCNB2Q92953 911 aa17.4■□□□□ 0.38
COL4A6-206ENST00000477085 PUS7LQ9H0K6 701 aaKnown RBP17.4■□□□□ 0.38
COL4A6-206ENST00000477085 WWC3Q9ULE0 1092 aa17.4■□□□□ 0.38
COL4A6-206ENST00000477085 RBM8AQ9Y5S9 174 aaKnown RBP17.4■□□□□ 0.38
COL4A6-206ENST00000477085 SNX14Q9Y5W7 946 aa17.4■□□□□ 0.38
COL4A6-206ENST00000477085 XDHP47989 1333 aa17.39■□□□□ 0.37
COL4A6-206ENST00000477085 TCRBV5S4A2TA0A5A2 114 aa17.39■□□□□ 0.37
COL4A6-206ENST00000477085 NPR1P16066 1061 aa17.39■□□□□ 0.37
COL4A6-206ENST00000477085 MCCP23508 829 aa17.39■□□□□ 0.37
COL4A6-206ENST00000477085 ADD2P35612 726 aa17.39■□□□□ 0.37
COL4A6-206ENST00000477085 CAVIN4Q5BKX8 364 aa17.39■□□□□ 0.37
COL4A6-206ENST00000477085 LEMD3Q9Y2U8 911 aa17.39■□□□□ 0.37
COL4A6-206ENST00000477085 COL11A2P13942 1736 aaPredicted RBP17.39■□□□□ 0.37
COL4A6-206ENST00000477085 IDH1O75874 414 aaKnown RBP17.38■□□□□ 0.37
COL4A6-206ENST00000477085 ZFYP08048 801 aaPredicted RBP17.38■□□□□ 0.37
COL4A6-206ENST00000477085 BECN1Q14457 450 aa17.38■□□□□ 0.37
COL4A6-206ENST00000477085 SLC9C2Q5TAH2 1124 aa17.38■□□□□ 0.37
COL4A6-206ENST00000477085 PRPF40BQ6NWY9 871 aaKnown RBP17.38■□□□□ 0.37
COL4A6-206ENST00000477085 OLFM4Q6UX06 510 aa17.38■□□□□ 0.37
COL4A6-206ENST00000477085 NSFL1CQ9UNZ2 370 aaKnown RBP17.38■□□□□ 0.37
COL4A6-206ENST00000477085 TAF6LQ9Y6J9 622 aa17.38■□□□□ 0.37
COL4A6-206ENST00000477085 PPEF1O14829 653 aaPredicted RBP17.38■□□□□ 0.37
COL4A6-206ENST00000477085 FOXP2O15409 715 aa17.38■□□□□ 0.37
COL4A6-206ENST00000477085 HIBADHP31937 336 aaKnown RBP17.38■□□□□ 0.37
COL4A6-206ENST00000477085 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
COL4A6-206ENST00000477085 MYO5AQ9Y4I1 1855 aaKnown RBP17.37■□□□□ 0.37
COL4A6-206ENST00000477085 PDE6AP16499 860 aa17.37■□□□□ 0.37
COL4A6-206ENST00000477085 CREB3L3Q68CJ9 461 aa17.37■□□□□ 0.37
COL4A6-206ENST00000477085 SP8Q8IXZ3 490 aa17.37■□□□□ 0.37
COL4A6-206ENST00000477085 APPBP2Q92624 585 aa17.37■□□□□ 0.37
COL4A6-206ENST00000477085 MASTLQ96GX5 879 aa17.37■□□□□ 0.37
COL4A6-206ENST00000477085 PODXL2Q9NZ53 605 aa17.37■□□□□ 0.37
COL4A6-206ENST00000477085 ZNF532Q9HCE3 1301 aa17.36■□□□□ 0.37
COL4A6-206ENST00000477085 SLC27A2O14975 620 aa17.36■□□□□ 0.37
COL4A6-206ENST00000477085 COL9A3Q14050 684 aaPredicted RBP17.36■□□□□ 0.37
COL4A6-206ENST00000477085 WASHC4Q2M389 1173 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms