RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 USP17L1Q7RTZ2 530 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 SULF1Q8IWU6 871 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 DNAAF4Q8WXU2 420 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 CDCA5Q96FF9 252 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 ABHD8Q96I13 439 aa14.92□□□□□ -0.02
VARS2-208ENST00000477052 USP17L8P0C7I0 530 aa14.91□□□□□ -0.02
VARS2-208ENST00000477052 MOB2Q70IA6 237 aa14.91□□□□□ -0.02
VARS2-208ENST00000477052 FAM9BQ8IZU0 186 aa14.91□□□□□ -0.02
VARS2-208ENST00000477052 C2orf69Q8N8R5 385 aa14.91□□□□□ -0.02
VARS2-208ENST00000477052 AGBL3Q8NEM8 1001 aa14.91□□□□□ -0.02
VARS2-208ENST00000477052 HHIPL1Q96JK4 782 aa14.91□□□□□ -0.02
VARS2-208ENST00000477052 MYOZ2Q9NPC6 264 aa14.91□□□□□ -0.02
VARS2-208ENST00000477052 FAM155AB1AL88 458 aaPredicted RBP14.9□□□□□ -0.02
VARS2-208ENST00000477052 IGHMBP2P38935 993 aaKnown RBP14.9□□□□□ -0.02
VARS2-208ENST00000477052 ZNF157P51786 506 aaPredicted RBP14.9□□□□□ -0.02
VARS2-208ENST00000477052 NBPF9Q3BBW0 867 aa14.9□□□□□ -0.02
VARS2-208ENST00000477052 RGMBQ6NW40 437 aa14.9□□□□□ -0.02
VARS2-208ENST00000477052 HELBQ8NG08 1087 aaPredicted RBP14.9□□□□□ -0.02
VARS2-208ENST00000477052 PSME4Q14997 1843 aa14.89□□□□□ -0.03
VARS2-208ENST00000477052 CASP8AP2Q9UKL3 1982 aa14.89□□□□□ -0.03
VARS2-208ENST00000477052 MED23Q9ULK4 1368 aa14.89□□□□□ -0.03
VARS2-208ENST00000477052 BRPF1P55201 1214 aaPredicted RBP14.89□□□□□ -0.03
VARS2-208ENST00000477052 KIF23Q02241 960 aaPredicted RBP14.89□□□□□ -0.03
VARS2-208ENST00000477052 DACT2Q5SW24 774 aa14.89□□□□□ -0.03
VARS2-208ENST00000477052 PODNQ7Z5L7 613 aa14.89□□□□□ -0.03
VARS2-208ENST00000477052 WDR63Q8IWG1 891 aa14.89□□□□□ -0.03
VARS2-208ENST00000477052 LINS1Q8NG48 757 aa14.89□□□□□ -0.03
VARS2-208ENST00000477052 TAF5LO75529 589 aa14.88□□□□□ -0.03
VARS2-208ENST00000477052 CSF1RP07333 972 aa14.88□□□□□ -0.03
VARS2-208ENST00000477052 NOGQ13253 232 aa14.88□□□□□ -0.03
VARS2-208ENST00000477052 MPHOSPH8Q99549 860 aa14.88□□□□□ -0.03
VARS2-208ENST00000477052 PLA2G12BQ9BX93 195 aa14.88□□□□□ -0.03
VARS2-208ENST00000477052 CHMP3Q9Y3E7 222 aa14.88□□□□□ -0.03
VARS2-208ENST00000477052 ZNF804BA4D1E1 1349 aa14.88□□□□□ -0.03
VARS2-208ENST00000477052 CCDC85CA6NKD9 419 aa14.87□□□□□ -0.03
VARS2-208ENST00000477052 SASH1O94885 1247 aa14.87□□□□□ -0.03
VARS2-208ENST00000477052 FOXO4P98177 505 aa14.87□□□□□ -0.03
VARS2-208ENST00000477052 CHRNDQ07001 517 aa14.87□□□□□ -0.03
VARS2-208ENST00000477052 EPHA10Q5JZY3 1008 aa14.87□□□□□ -0.03
VARS2-208ENST00000477052 ZNF594Q96JF6 807 aaPredicted RBP14.87□□□□□ -0.03
VARS2-208ENST00000477052 MYH16Q9H6N6 1097 aa14.87□□□□□ -0.03
VARS2-208ENST00000477052 ZNF646O15015 1829 aaPredicted RBP14.87□□□□□ -0.03
VARS2-208ENST00000477052 UBE2Q2LH0YL09 131 aa14.86□□□□□ -0.03
VARS2-208ENST00000477052 KCNJ4P48050 445 aa14.86□□□□□ -0.03
VARS2-208ENST00000477052 GTF2IP78347 998 aa14.86□□□□□ -0.03
VARS2-208ENST00000477052 BEND3Q5T5X7 828 aa14.86□□□□□ -0.03
VARS2-208ENST00000477052 KIAA0825Q8IV33 1275 aa14.86□□□□□ -0.03
VARS2-208ENST00000477052 COA1Q9GZY4 146 aa14.86□□□□□ -0.03
VARS2-208ENST00000477052 LEMD3Q9Y2U8 911 aa14.86□□□□□ -0.03
VARS2-208ENST00000477052 ZNF609O15014 1411 aa14.85□□□□□ -0.03
VARS2-208ENST00000477052 ANKRD18BA2A2Z9 1011 aa14.85□□□□□ -0.03
VARS2-208ENST00000477052 PLIN1O60240 522 aa14.85□□□□□ -0.03
VARS2-208ENST00000477052 TRPA1O75762 1119 aa14.85□□□□□ -0.03
VARS2-208ENST00000477052 TTLL5Q6EMB2 1281 aa14.85□□□□□ -0.03
VARS2-208ENST00000477052 LMBR1LQ6UX01 489 aa14.85□□□□□ -0.03
VARS2-208ENST00000477052 MCOLN1Q9GZU1 580 aa14.85□□□□□ -0.03
VARS2-208ENST00000477052 JAG2Q9Y219 1238 aa14.85□□□□□ -0.03
VARS2-208ENST00000477052 WNT10BO00744 389 aa14.84□□□□□ -0.03
VARS2-208ENST00000477052 CA12O43570 354 aa14.84□□□□□ -0.03
VARS2-208ENST00000477052 SLC10A3P09131 477 aa14.84□□□□□ -0.03
VARS2-208ENST00000477052 PRKG1Q13976 671 aa14.84□□□□□ -0.03
VARS2-208ENST00000477052 NCBP3Q53F19 620 aaKnown RBP14.84□□□□□ -0.03
VARS2-208ENST00000477052 STRIP1Q5VSL9 837 aa14.84□□□□□ -0.03
VARS2-208ENST00000477052 SLC4A10Q6U841 1118 aa14.84□□□□□ -0.03
VARS2-208ENST00000477052 RASAL3Q86YV0 1011 aa14.84□□□□□ -0.03
VARS2-208ENST00000477052 CCDC102AQ96A19 550 aa14.84□□□□□ -0.03
VARS2-208ENST00000477052 CSRNP1Q96S65 589 aa14.84□□□□□ -0.03
VARS2-208ENST00000477052 ANKRD2Q9GZV1 360 aa14.84□□□□□ -0.03
VARS2-208ENST00000477052 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.84□□□□□ -0.03
VARS2-208ENST00000477052 PCDHAC2Q9Y5I4 1007 aa14.84□□□□□ -0.03
VARS2-208ENST00000477052 MKRN3Q13064 507 aaKnown RBP14.83□□□□□ -0.04
VARS2-208ENST00000477052 IFIT5Q13325 482 aaKnown RBP14.83□□□□□ -0.04
VARS2-208ENST00000477052 DGKZQ13574 1117 aa14.83□□□□□ -0.04
VARS2-208ENST00000477052 OGFOD1Q8N543 542 aa14.83□□□□□ -0.04
VARS2-208ENST00000477052 CERS5Q8N5B7 392 aa14.83□□□□□ -0.04
VARS2-208ENST00000477052 RNF186Q9NXI6 227 aa14.83□□□□□ -0.04
VARS2-208ENST00000477052 FZD1Q9UP38 647 aa14.83□□□□□ -0.04
VARS2-208ENST00000477052 F8W031 263 aaPredicted RBP14.82□□□□□ -0.04
VARS2-208ENST00000477052 TTLL12Q14166 644 aaPredicted RBP14.82□□□□□ -0.04
VARS2-208ENST00000477052 CD209Q9NNX6 404 aa14.82□□□□□ -0.04
VARS2-208ENST00000477052 IRS2Q9Y4H2 1338 aa14.82□□□□□ -0.04
VARS2-208ENST00000477052 GRM8O00222 908 aa14.81□□□□□ -0.04
VARS2-208ENST00000477052 CACNA1FO60840 1977 aa14.81□□□□□ -0.04
VARS2-208ENST00000477052 PITPNM2Q9BZ72 1349 aa14.81□□□□□ -0.04
VARS2-208ENST00000477052 TAF7LQ5H9L4 462 aa14.8□□□□□ -0.04
VARS2-208ENST00000477052 SUCLG2Q96I99 432 aa14.8□□□□□ -0.04
VARS2-208ENST00000477052 PUS3Q9BZE2 481 aaKnown RBP14.8□□□□□ -0.04
VARS2-208ENST00000477052 C9orf78Q9NZ63 289 aaPredicted RBP14.8□□□□□ -0.04
VARS2-208ENST00000477052 AOX1Q06278 1338 aa14.8□□□□□ -0.04
VARS2-208ENST00000477052 A0A1B0GUL6 1792 aa14.8□□□□□ -0.04
VARS2-208ENST00000477052 PAPPA2Q9BXP8 1791 aa14.8□□□□□ -0.04
VARS2-208ENST00000477052 CCDC57Q2TAC2 916 aa14.79□□□□□ -0.04
VARS2-208ENST00000477052 LDHAL6AQ6ZMR3 332 aa14.79□□□□□ -0.04
VARS2-208ENST00000477052 MYO3BQ8WXR4 1341 aa14.79□□□□□ -0.04
VARS2-208ENST00000477052 KAZALD1Q96I82 304 aa14.79□□□□□ -0.04
VARS2-208ENST00000477052 CNNM1Q9NRU3 951 aa14.79□□□□□ -0.04
VARS2-208ENST00000477052 CLRN2A0PK11 232 aa14.78□□□□□ -0.04
VARS2-208ENST00000477052 NBPF7P0C2Y1 421 aaPredicted RBP14.78□□□□□ -0.04
VARS2-208ENST00000477052 PTPN12Q05209 780 aaKnown RBP14.78□□□□□ -0.04
VARS2-208ENST00000477052 ZBED3Q96IU2 234 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms