RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 EPS15P42566 896 aa21.9■■□□□ 1.1
SREBF1-211ENST00000476994 CCDC57Q2TAC2 916 aa21.9■■□□□ 1.1
SREBF1-211ENST00000476994 DEFB115Q30KQ5 88 aa21.9■■□□□ 1.1
SREBF1-211ENST00000476994 CELF1Q92879 486 aaKnown RBP21.9■■□□□ 1.1
SREBF1-211ENST00000476994 ZNF594Q96JF6 807 aaPredicted RBP21.9■■□□□ 1.1
SREBF1-211ENST00000476994 DCTPP1Q9H773 170 aa21.9■■□□□ 1.1
SREBF1-211ENST00000476994 ANKRD18BA2A2Z9 1011 aa21.89■■□□□ 1.09
SREBF1-211ENST00000476994 TNIP1Q15025 636 aa21.89■■□□□ 1.09
SREBF1-211ENST00000476994 ADARB2Q9NS39 739 aaKnown RBP21.89■■□□□ 1.09
SREBF1-211ENST00000476994 VEGFBP49765 207 aa21.88■■□□□ 1.09
SREBF1-211ENST00000476994 KIAA2012Q0VF49 1180 aa21.88■■□□□ 1.09
SREBF1-211ENST00000476994 CIAPIN1Q6FI81 312 aa21.88■■□□□ 1.09
SREBF1-211ENST00000476994 B4GALNT3Q6L9W6 998 aa21.88■■□□□ 1.09
SREBF1-211ENST00000476994 SMC5Q8IY18 1101 aa21.88■■□□□ 1.09
SREBF1-211ENST00000476994 RWDD1Q9H446 243 aaPredicted RBP21.88■■□□□ 1.09
SREBF1-211ENST00000476994 GPRC5DQ9NZD1 345 aa21.88■■□□□ 1.09
SREBF1-211ENST00000476994 RASSF10A6NK89 507 aa21.87■■□□□ 1.09
SREBF1-211ENST00000476994 CAPN15O75808 1086 aa21.87■■□□□ 1.09
SREBF1-211ENST00000476994 CXCL9Q07325 125 aa21.87■■□□□ 1.09
SREBF1-211ENST00000476994 ATG9AQ7Z3C6 839 aa21.87■■□□□ 1.09
SREBF1-211ENST00000476994 PUS3Q9BZE2 481 aaKnown RBP21.87■■□□□ 1.09
SREBF1-211ENST00000476994 ARAP2Q8WZ64 1704 aa21.86■■□□□ 1.09
SREBF1-211ENST00000476994 SLC51AQ86UW1 340 aa21.86■■□□□ 1.09
SREBF1-211ENST00000476994 CCDC136Q96JN2 1154 aa21.86■■□□□ 1.09
SREBF1-211ENST00000476994 CDC5LQ99459 802 aaKnown RBP21.86■■□□□ 1.09
SREBF1-211ENST00000476994 FBXO3Q9UK99 471 aa21.86■■□□□ 1.09
SREBF1-211ENST00000476994 EYA2O00167 538 aa21.85■■□□□ 1.09
SREBF1-211ENST00000476994 CIAO1O76071 339 aa21.85■■□□□ 1.09
SREBF1-211ENST00000476994 LRRC24Q50LG9 513 aa21.85■■□□□ 1.09
SREBF1-211ENST00000476994 PAXIP1Q6ZW49 1069 aaPredicted RBP21.85■■□□□ 1.09
SREBF1-211ENST00000476994 EXOC6BQ9Y2D4 811 aa21.85■■□□□ 1.09
SREBF1-211ENST00000476994 RIPOR2Q9Y4F9 1068 aa21.85■■□□□ 1.09
SREBF1-211ENST00000476994 SURF6O75683 361 aaKnown RBP21.84■■□□□ 1.09
SREBF1-211ENST00000476994 CTCFP49711 727 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-211ENST00000476994 GMPSP49915 693 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-211ENST00000476994 RPS8P62241 208 aaKnown RBP21.84■■□□□ 1.09
SREBF1-211ENST00000476994 NSFL1CQ9UNZ2 370 aaKnown RBP21.84■■□□□ 1.09
SREBF1-211ENST00000476994 RAD17O75943 681 aa21.83■■□□□ 1.09
SREBF1-211ENST00000476994 SASH1O94885 1247 aa21.83■■□□□ 1.09
SREBF1-211ENST00000476994 ECE1P42892 770 aa21.83■■□□□ 1.09
SREBF1-211ENST00000476994 WASHC4Q2M389 1173 aa21.83■■□□□ 1.09
SREBF1-211ENST00000476994 ANKRD18AQ8IVF6 992 aa21.83■■□□□ 1.09
SREBF1-211ENST00000476994 GCC1Q96CN9 775 aa21.83■■□□□ 1.09
SREBF1-211ENST00000476994 SIL1Q9H173 461 aa21.83■■□□□ 1.09
SREBF1-211ENST00000476994 BSDC1Q9NW68 430 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-211ENST00000476994 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-211ENST00000476994 H7C1D1 291 aa21.82■■□□□ 1.08
SREBF1-211ENST00000476994 FOXN1O15353 648 aa21.82■■□□□ 1.08
SREBF1-211ENST00000476994 MAP2K1Q02750 393 aaPredicted RBP21.82■■□□□ 1.08
SREBF1-211ENST00000476994 EYA3Q99504 573 aa21.82■■□□□ 1.08
SREBF1-211ENST00000476994 WDR33Q9C0J8 1336 aaKnown RBP21.81■■□□□ 1.08
SREBF1-211ENST00000476994 C6orf229H3BNL8 230 aa21.81■■□□□ 1.08
SREBF1-211ENST00000476994 IGHMBP2P38935 993 aaKnown RBP21.81■■□□□ 1.08
SREBF1-211ENST00000476994 TAF7LQ5H9L4 462 aa21.81■■□□□ 1.08
SREBF1-211ENST00000476994 LDHAL6AQ6ZMR3 332 aa21.81■■□□□ 1.08
SREBF1-211ENST00000476994 CENPQQ7L2Z9 268 aaPredicted RBP21.81■■□□□ 1.08
SREBF1-211ENST00000476994 VGLL2Q8N8G2 317 aa21.81■■□□□ 1.08
SREBF1-211ENST00000476994 BEGAINQ9BUH8 593 aa21.81■■□□□ 1.08
SREBF1-211ENST00000476994 PRDM10Q9NQV6 1147 aa21.81■■□□□ 1.08
SREBF1-211ENST00000476994 DUOX1Q9NRD9 1551 aa21.81■■□□□ 1.08
SREBF1-211ENST00000476994 IL15P40933 162 aaPredicted RBP21.8■■□□□ 1.08
SREBF1-211ENST00000476994 ZC3H15Q8WU90 426 aaKnown RBP21.8■■□□□ 1.08
SREBF1-211ENST00000476994 RAB11FIP3O75154 756 aa21.79■■□□□ 1.08
SREBF1-211ENST00000476994 G3BP1Q13283 466 aaKnown RBP eCLIP21.79■■□□□ 1.08
SREBF1-211ENST00000476994 HSP90AB4PQ58FF6 505 aa21.79■■□□□ 1.08
SREBF1-211ENST00000476994 RHPN1Q8TCX5 695 aa21.79■■□□□ 1.08
SREBF1-211ENST00000476994 MPHOSPH8Q99549 860 aa21.79■■□□□ 1.08
SREBF1-211ENST00000476994 WBP1LQ9NX94 342 aa21.79■■□□□ 1.08
SREBF1-211ENST00000476994 CNOT7Q9UIV1 285 aaKnown RBP21.79■■□□□ 1.08
SREBF1-211ENST00000476994 G3V3G9 751 aa21.78■■□□□ 1.08
SREBF1-211ENST00000476994 RIMBP2O15034 1052 aa21.78■■□□□ 1.08
SREBF1-211ENST00000476994 DCAF8Q5TAQ9 597 aa21.78■■□□□ 1.08
SREBF1-211ENST00000476994 CNNM1Q9NRU3 951 aa21.78■■□□□ 1.08
SREBF1-211ENST00000476994 MINPP1Q9UNW1 487 aa21.78■■□□□ 1.08
SREBF1-211ENST00000476994 TRAF5O00463 557 aa21.77■■□□□ 1.08
SREBF1-211ENST00000476994 GRM1Q13255 1194 aa21.77■■□□□ 1.08
SREBF1-211ENST00000476994 ERC1Q8IUD2 1116 aa21.77■■□□□ 1.08
SREBF1-211ENST00000476994 CAPNS2Q96L46 248 aa21.77■■□□□ 1.08
SREBF1-211ENST00000476994 ZNF609O15014 1411 aa21.77■■□□□ 1.08
SREBF1-211ENST00000476994 CHRNDQ07001 517 aa21.76■■□□□ 1.07
SREBF1-211ENST00000476994 TFCP2Q12800 502 aa21.76■■□□□ 1.07
SREBF1-211ENST00000476994 CDC37L1Q7L3B6 337 aa21.76■■□□□ 1.07
SREBF1-211ENST00000476994 DPF2Q92785 391 aa21.76■■□□□ 1.07
SREBF1-211ENST00000476994 KIF1BPQ96EK5 621 aa21.76■■□□□ 1.07
SREBF1-211ENST00000476994 ZC3H12CQ9C0D7 883 aaKnown RBP21.76■■□□□ 1.07
SREBF1-211ENST00000476994 DBNDD1Q9H9R9 158 aa21.76■■□□□ 1.07
SREBF1-211ENST00000476994 ANKIB1Q9P2G1 1089 aa21.76■■□□□ 1.07
SREBF1-211ENST00000476994 TLL2Q9Y6L7 1015 aa21.76■■□□□ 1.07
SREBF1-211ENST00000476994 MROH5Q6ZUA9 1318 aa21.76■■□□□ 1.07
SREBF1-211ENST00000476994 YDJCA8MPS7 323 aa21.75■■□□□ 1.07
SREBF1-211ENST00000476994 SMARCA5O60264 1052 aaPredicted RBP21.75■■□□□ 1.07
SREBF1-211ENST00000476994 CELF2O95319 508 aaKnown RBP21.75■■□□□ 1.07
SREBF1-211ENST00000476994 GPSM2P81274 684 aa21.75■■□□□ 1.07
SREBF1-211ENST00000476994 NUCB1Q02818 461 aa21.75■■□□□ 1.07
SREBF1-211ENST00000476994 MICALL2Q8IY33 904 aa21.75■■□□□ 1.07
SREBF1-211ENST00000476994 LRRCC1Q9C099 1032 aa21.75■■□□□ 1.07
SREBF1-211ENST00000476994 POLR2AP24928 1970 aaKnown RBP21.75■■□□□ 1.07
SREBF1-211ENST00000476994 APBB1O00213 710 aa21.74■■□□□ 1.07
SREBF1-211ENST00000476994 ECE2O60344 883 aa21.74■■□□□ 1.07
SREBF1-211ENST00000476994 RPS12P25398 132 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms