RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 ZNF784Q8NCA9 323 aaPredicted RBP9.07□□□□□ -0.96
LRCH3-215ENST00000476664 NUDT16Q96DE0 195 aaKnown RBP9.07□□□□□ -0.96
LRCH3-215ENST00000476664 IFT43Q96FT9 208 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 RSRP1Q9BUV0 290 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 EFR3BQ9Y2G0 817 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 MRVI1Q9Y6F6 885 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 TMEM94Q12767 1356 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 TNRQ92752 1358 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 UGGT1Q9NYU2 1555 aa9.07□□□□□ -0.96
LRCH3-215ENST00000476664 FAM135AQ9P2D6 1515 aa9.06□□□□□ -0.96
LRCH3-215ENST00000476664 STAU1O95793 577 aaKnown RBP9.06□□□□□ -0.96
LRCH3-215ENST00000476664 HIRAP54198 1017 aaPredicted RBP9.06□□□□□ -0.96
LRCH3-215ENST00000476664 GYS2P54840 703 aa9.06□□□□□ -0.96
LRCH3-215ENST00000476664 INTS6LQ5JSJ4 861 aaKnown RBP9.06□□□□□ -0.96
LRCH3-215ENST00000476664 CYP2U1Q7Z449 544 aa9.06□□□□□ -0.96
LRCH3-215ENST00000476664 FERMT3Q86UX7 667 aa9.06□□□□□ -0.96
LRCH3-215ENST00000476664 NBPF15Q8N660 670 aa9.06□□□□□ -0.96
LRCH3-215ENST00000476664 CPLX3Q8WVH0 158 aa9.06□□□□□ -0.96
LRCH3-215ENST00000476664 HNRNPLLQ8WVV9 542 aaKnown RBP9.06□□□□□ -0.96
LRCH3-215ENST00000476664 CCDC74AQ96AQ1 378 aa9.06□□□□□ -0.96
LRCH3-215ENST00000476664 SPOCK3Q9BQ16 436 aa9.06□□□□□ -0.96
LRCH3-215ENST00000476664 PRR12Q9ULL5 1215 aa9.06□□□□□ -0.96
LRCH3-215ENST00000476664 HPS5Q9UPZ3 1129 aa9.06□□□□□ -0.96
LRCH3-215ENST00000476664 MAP3K1Q13233 1512 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 BCL9LQ86UU0 1499 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 SERTM1A2A2V5 107 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 FAM221BA6H8Z2 402 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 SOX9P48436 509 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 IFRD2Q12894 506 aaPredicted RBP9.05□□□□□ -0.96
LRCH3-215ENST00000476664 RELL1Q8IUW5 271 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 ANKK1Q8NFD2 765 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 GPR152Q8TDT2 470 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 UBA5Q9GZZ9 404 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 CCDC113Q9H0I3 377 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 PRKAG3Q9UGI9 489 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 TCEAL9Q9UHQ7 104 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 TSR3Q9UJK0 312 aaKnown RBP9.05□□□□□ -0.96
LRCH3-215ENST00000476664 MAP4K5Q9Y4K4 846 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 ARHGAP5Q13017 1502 aa9.05□□□□□ -0.96
LRCH3-215ENST00000476664 CDK2AP1O14519 115 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 CREB3O43889 395 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 ZPR1O75312 459 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 ADH1BP00325 375 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 WNT7BP56706 349 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 TNNI3KQ59H18 835 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 GGT6Q6P531 493 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 VASH1Q7L8A9 365 aaPredicted RBP9.04□□□□□ -0.96
LRCH3-215ENST00000476664 DEFB132Q7Z7B7 95 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 ALDH16A1Q8IZ83 802 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 RELTQ969Z4 430 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 C8orf48Q96LL4 319 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 FEZ1Q99689 392 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 HOMER2Q9NSB8 354 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 GINM1Q9NU53 330 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 ATP7AQ04656 1500 aa9.04□□□□□ -0.96
LRCH3-215ENST00000476664 KIF14Q15058 1648 aa9.03□□□□□ -0.96
LRCH3-215ENST00000476664 CCDC85CA6NKD9 419 aa9.03□□□□□ -0.96
LRCH3-215ENST00000476664 NOS2P35228 1153 aa9.03□□□□□ -0.96
LRCH3-215ENST00000476664 BIRC2Q13490 618 aa9.03□□□□□ -0.96
LRCH3-215ENST00000476664 PI16Q6UXB8 463 aa9.03□□□□□ -0.96
LRCH3-215ENST00000476664 C16orf86Q6ZW13 317 aa9.03□□□□□ -0.96
LRCH3-215ENST00000476664 EPS8L3Q8TE67 593 aaKnown RBP9.03□□□□□ -0.96
LRCH3-215ENST00000476664 GGNBP2Q9H3C7 697 aa9.03□□□□□ -0.96
LRCH3-215ENST00000476664 ADAMTS1Q9UHI8 967 aa9.03□□□□□ -0.96
LRCH3-215ENST00000476664 ESYT3A0FGR9 886 aa9.02□□□□□ -0.97
LRCH3-215ENST00000476664 SOWAHBA6NEL2 793 aa9.02□□□□□ -0.97
LRCH3-215ENST00000476664 POTECB2RU33 542 aa9.02□□□□□ -0.97
LRCH3-215ENST00000476664 EML1O00423 815 aa9.02□□□□□ -0.97
LRCH3-215ENST00000476664 MASP1P48740 699 aa9.02□□□□□ -0.97
LRCH3-215ENST00000476664 DHX9Q08211 1270 aaKnown RBP9.02□□□□□ -0.97
LRCH3-215ENST00000476664 TREML1Q86YW5 311 aa9.02□□□□□ -0.97
LRCH3-215ENST00000476664 TMEM260Q9NX78 707 aa9.02□□□□□ -0.97
LRCH3-215ENST00000476664 SAMD9Q5K651 1589 aa9.02□□□□□ -0.97
LRCH3-215ENST00000476664 EIF4A3P38919 411 aaKnown RBP9.01□□□□□ -0.97
LRCH3-215ENST00000476664 BLMP54132 1417 aaPredicted RBP9.01□□□□□ -0.97
LRCH3-215ENST00000476664 RHBDL3P58872 404 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 RALBP1Q15311 655 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 TEAD4Q15561 434 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 CCSAPQ6IQ19 270 aaPredicted RBP9.01□□□□□ -0.97
LRCH3-215ENST00000476664 POTEHQ6S545 545 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 POTEEQ6S8J3 1075 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 SNX29Q8TEQ0 813 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 ANAPC16Q96DE5 110 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 SGSM3Q96HU1 749 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 DNAJC7Q99615 494 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 IER2Q9BTL4 223 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 ZNF232Q9UNY5 417 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 AXIN2Q9Y2T1 843 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 MSRB2Q9Y3D2 182 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 NLRP1Q9C000 1473 aa9.01□□□□□ -0.97
LRCH3-215ENST00000476664 ADGBQ8N7X0 1667 aa9□□□□□ -0.97
LRCH3-215ENST00000476664 TK2O00142 265 aa9□□□□□ -0.97
LRCH3-215ENST00000476664 RLBP1P12271 317 aa9□□□□□ -0.97
LRCH3-215ENST00000476664 GSTT1P30711 240 aa9□□□□□ -0.97
LRCH3-215ENST00000476664 IRS1P35568 1242 aa9□□□□□ -0.97
LRCH3-215ENST00000476664 APBB1IPQ7Z5R6 666 aaPredicted RBP9□□□□□ -0.97
LRCH3-215ENST00000476664 LILRB2Q8N423 598 aa9□□□□□ -0.97
LRCH3-215ENST00000476664 NT5C1AQ9BXI3 368 aa9□□□□□ -0.97
LRCH3-215ENST00000476664 KLK14Q9P0G3 267 aa9□□□□□ -0.97
LRCH3-215ENST00000476664 TTF2Q9UNY4 1162 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms