RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 KARSQ15046 597 aaKnown RBP20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 NBPF6Q5VWK0 638 aa20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 NBPF5PQ86XG9 351 aaPredicted RBP20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 C8orf58Q8NAV2 365 aa20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 SREK1Q8WXA9 508 aaKnown RBP20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 NBPF4Q96M43 638 aa20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 NGLY1Q96IV0 654 aa20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 IL15P40933 162 aaPredicted RBP20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 GUCA1BQ9UMX6 200 aa20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 GJC1P36383 396 aa20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 CHRNA2Q15822 529 aa20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 ZMYND15Q9H091 742 aa20.13■□□□□ 0.81
LPCAT1-202ENST00000475622 LMBR1Q8WVP7 490 aa20.12■□□□□ 0.81
LPCAT1-202ENST00000475622 LZTFL1Q9NQ48 299 aa20.12■□□□□ 0.81
LPCAT1-202ENST00000475622 NAA16Q6N069 864 aaPredicted RBP20.12■□□□□ 0.81
LPCAT1-202ENST00000475622 PA2G4Q9UQ80 394 aaKnown RBP20.12■□□□□ 0.81
LPCAT1-202ENST00000475622 AK2P54819 239 aa20.12■□□□□ 0.81
LPCAT1-202ENST00000475622 C8orf34Q49A92 452 aa20.12■□□□□ 0.81
LPCAT1-202ENST00000475622 TTC16Q8NEE8 873 aa20.12■□□□□ 0.81
LPCAT1-202ENST00000475622 ZNF622Q969S3 477 aaKnown RBP eCLIP20.12■□□□□ 0.81
LPCAT1-202ENST00000475622 ZBTB9Q96C00 473 aa20.12■□□□□ 0.81
LPCAT1-202ENST00000475622 MSL1Q68DK7 614 aa20.12■□□□□ 0.81
LPCAT1-202ENST00000475622 CHST3Q7LGC8 479 aa20.11■□□□□ 0.81
LPCAT1-202ENST00000475622 RFC4P35249 363 aa20.11■□□□□ 0.81
LPCAT1-202ENST00000475622 PUS7Q96PZ0 661 aaKnown RBP20.11■□□□□ 0.81
LPCAT1-202ENST00000475622 PAG1Q9NWQ8 432 aa20.11■□□□□ 0.81
LPCAT1-202ENST00000475622 KSR2Q6VAB6 950 aa20.11■□□□□ 0.81
LPCAT1-202ENST00000475622 STMN4Q9H169 189 aaPredicted RBP20.11■□□□□ 0.81
LPCAT1-202ENST00000475622 IFNKQ9P0W0 207 aa20.11■□□□□ 0.81
LPCAT1-202ENST00000475622 TMEM110-MUSTN1A8MSY1 372 aa20.11■□□□□ 0.81
LPCAT1-202ENST00000475622 UBXN1Q04323 297 aa20.11■□□□□ 0.81
LPCAT1-202ENST00000475622 GSTA5Q7RTV2 222 aa20.11■□□□□ 0.81
LPCAT1-202ENST00000475622 SELENOSQ9BQE4 189 aa20.11■□□□□ 0.81
LPCAT1-202ENST00000475622 TRAF1Q13077 416 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 NPHP3Q7Z494 1330 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 SLC39A6Q13433 755 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 ZNF569Q5MCW4 686 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 APOBRQ0VD83 1088 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 RAB3GAP1Q15042 981 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 CCDC129Q6ZRS4 1044 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 ANKS4BQ8N8V4 417 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 TOP2BQ02880 1626 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 ATP2A1O14983 1001 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 EEF2P13639 858 aaKnown RBP20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 ZBTB16Q05516 673 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 SYT10Q6XYQ8 523 aa20.1■□□□□ 0.81
LPCAT1-202ENST00000475622 PTPN23Q9H3S7 1636 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 PLCB3Q01970 1234 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 ZGPATQ8N5A5 531 aaKnown RBP20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 C6orf50Q9HD87 102 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 SSX2IPQ9Y2D8 614 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 KRT79Q5XKE5 535 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 MICALL1Q8N3F8 863 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 VPS18Q9P253 973 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 F8W031 263 aaPredicted RBP20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 RHOXF2BP0C7M4 288 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 CCDC121Q6ZUS5 278 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 SMARCC2Q8TAQ2 1214 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 RHOXF2Q9BQY4 288 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 CD109Q6YHK3 1445 aa20.09■□□□□ 0.81
LPCAT1-202ENST00000475622 NEK11Q8NG66 645 aa20.08■□□□□ 0.81
LPCAT1-202ENST00000475622 UTP14AQ9BVJ6 771 aaKnown RBP20.08■□□□□ 0.81
LPCAT1-202ENST00000475622 CALM1P0DP23 149 aa20.08■□□□□ 0.81
LPCAT1-202ENST00000475622 CALM2P0DP24 149 aa20.08■□□□□ 0.81
LPCAT1-202ENST00000475622 CALM3P0DP25 149 aa20.08■□□□□ 0.81
LPCAT1-202ENST00000475622 CALML3P27482 149 aa20.08■□□□□ 0.81
LPCAT1-202ENST00000475622 ARL1P40616 181 aaPredicted RBP20.08■□□□□ 0.81
LPCAT1-202ENST00000475622 GTF2A1P52655 376 aaPredicted RBP20.08■□□□□ 0.81
LPCAT1-202ENST00000475622 TTC14Q96N46 770 aa20.08■□□□□ 0.81
LPCAT1-202ENST00000475622 EBAG9O00559 213 aa20.08■□□□□ 0.81
LPCAT1-202ENST00000475622 RALGAPBQ86X10 1494 aa20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 KIAA0586Q9BVV6 1533 aa20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 PTPDC1A2A3K4 754 aa20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 CEBPAP49715 358 aaPredicted RBP20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 PICALMQ13492 652 aa20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 CREB3L3Q68CJ9 461 aa20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 BICDL2A1A5D9 508 aa20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 ZEB2O60315 1214 aa20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 DNAJC21Q5F1R6 531 aaKnown RBP20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 SMC5Q8IY18 1101 aa20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 IFT81Q8WYA0 676 aa20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 MPHOSPH6Q99547 160 aaKnown RBP20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 TCHPQ9BT92 498 aa20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 IMPG2Q9BZV3 1241 aa20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 RPRD2Q5VT52 1461 aaKnown RBP20.08■□□□□ 0.8
LPCAT1-202ENST00000475622 SMIM23A6NLE4 172 aa20.07■□□□□ 0.8
LPCAT1-202ENST00000475622 PAXIP1Q6ZW49 1069 aaPredicted RBP20.07■□□□□ 0.8
LPCAT1-202ENST00000475622 TERF1P54274 439 aa20.07■□□□□ 0.8
LPCAT1-202ENST00000475622 CCDC63Q8NA47 563 aa20.07■□□□□ 0.8
LPCAT1-202ENST00000475622 TTC41PQ6P2S7 1318 aa20.07■□□□□ 0.8
LPCAT1-202ENST00000475622 MAP3K1Q13233 1512 aa20.07■□□□□ 0.8
LPCAT1-202ENST00000475622 KRT2P35908 639 aa20.07■□□□□ 0.8
LPCAT1-202ENST00000475622 SMC6Q96SB8 1091 aa20.07■□□□□ 0.8
LPCAT1-202ENST00000475622 ADGRL1O94910 1474 aa20.07■□□□□ 0.8
LPCAT1-202ENST00000475622 TLDC2A0PJX2 215 aa20.06■□□□□ 0.8
LPCAT1-202ENST00000475622 ST5P78524 1137 aa20.06■□□□□ 0.8
LPCAT1-202ENST00000475622 ZNF354CQ86Y25 554 aa20.06■□□□□ 0.8
LPCAT1-202ENST00000475622 CCDC50Q8IVM0 306 aa20.06■□□□□ 0.8
LPCAT1-202ENST00000475622 PPP1R9BQ96SB3 815 aa20.06■□□□□ 0.8
LPCAT1-202ENST00000475622 MAGEB6P1A0A0J9YX57 407 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms