RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 NFE2L2Q16236 605 aa7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 C1QTNF12Q5T7M4 302 aa7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 ZNF746Q6NUN9 644 aaPredicted RBP7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 LMNTD2Q8IXW0 634 aa7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 MPHOSPH6Q99547 160 aaKnown RBP7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 AVENQ9NQS1 362 aaPredicted RBP7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 ANKRD33BA6NCL7 494 aa7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 NEFHP12036 1026 aa7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 KCNA2P16389 499 aa7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 FOXK2Q01167 660 aa7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 C6orf132Q5T0Z8 1188 aa7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 KLHL10Q6JEL2 608 aa7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 CATIPQ7Z7H3 387 aa7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 NGDNQ8NEJ9 315 aaKnown RBP7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 DMGDHQ9UI17 866 aaKnown RBP7.34□□□□□ -1.23
SMARCE1-208ENST00000474246 RRBP1Q9P2E9 1410 aaKnown RBP7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 GOLGA6L6A8MZA4 724 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 IPO5O00410 1097 aaKnown RBP7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 CA12O43570 354 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 MTA2O94776 668 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 TXNRD1Q16881 649 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 MSL1Q68DK7 614 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 ANKRD13DQ6ZTN6 518 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 CLIP1P30622 1438 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 PABPN1LA6NDY0 278 aaKnown RBP7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 EIF5P55010 431 aaKnown RBP7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 NAP1L1P55209 391 aaKnown RBP7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 ALDH1L2Q3SY69 923 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 CCDC73Q6ZRK6 1079 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 UBE2Q1Q7Z7E8 422 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 RAPGEFL1Q9UHV5 662 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 ACAD8Q9UKU7 415 aa7.33□□□□□ -1.24
SMARCE1-208ENST00000474246 SNPHO15079 494 aa7.32□□□□□ -1.24
SMARCE1-208ENST00000474246 FOSP01100 380 aaPredicted RBP7.32□□□□□ -1.24
SMARCE1-208ENST00000474246 C9orf131Q5VYM1 1079 aa7.32□□□□□ -1.24
SMARCE1-208ENST00000474246 CHCHD4Q8N4Q1 142 aa7.32□□□□□ -1.24
SMARCE1-208ENST00000474246 FMNL2Q96PY5 1086 aa7.32□□□□□ -1.24
SMARCE1-208ENST00000474246 CCDC94Q9BW85 323 aaPredicted RBP7.32□□□□□ -1.24
SMARCE1-208ENST00000474246 PCGF6Q9BYE7 350 aa7.32□□□□□ -1.24
SMARCE1-208ENST00000474246 ALDH8A1Q9H2A2 487 aaPredicted RBP7.32□□□□□ -1.24
SMARCE1-208ENST00000474246 GDPD2Q9HCC8 539 aa7.32□□□□□ -1.24
SMARCE1-208ENST00000474246 SNRKQ9NRH2 765 aa7.32□□□□□ -1.24
SMARCE1-208ENST00000474246 TRPM2O94759 1503 aa7.32□□□□□ -1.24
SMARCE1-208ENST00000474246 KIF1CO43896 1103 aaKnown RBP7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 CLK1P49759 484 aaKnown RBP7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 IFT88Q13099 833 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 CCDC89Q8N998 374 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 GOLGA1Q92805 767 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 TTC14Q96N46 770 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 ORAI2Q96SN7 254 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 TINF2Q9BSI4 451 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 C22orf23Q9BZE7 217 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 LZTS1Q9Y250 596 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 TNRC6CQ9HCJ0 1690 aaKnown RBP7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 COL24A1Q17RW2 1714 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 NPHP1O15259 732 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 PLIN1O60240 522 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 DNAJC6O75061 913 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 PDGFRBP09619 1106 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 COL19A1Q14993 1142 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 LONRF1Q17RB8 773 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 ZC3H12AQ5D1E8 599 aaKnown RBP7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 PPP4R3BQ5MIZ7 849 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 LCA5Q86VQ0 697 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 CHMP3Q9Y3E7 222 aa7.31□□□□□ -1.24
SMARCE1-208ENST00000474246 VIRMAQ69YN4 1812 aaKnown RBP7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 KIF20AO95235 890 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 HOXB1P14653 301 aaPredicted RBP7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 VEGFAP15692 232 aaPredicted RBP7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 ODR4Q5SWX8 454 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 CCDC70Q6NSX1 233 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 PADI6Q6TGC4 694 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 CHPFQ8IZ52 775 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 SLC39A13Q96H72 371 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 BTG4Q9NY30 223 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 TTF2Q9UNY4 1162 aaKnown RBP7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 CDC42BPBQ9Y5S2 1711 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 DYTNA2CJ06 578 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 MPHOSPH10O00566 681 aaKnown RBP7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 FOSL1P15407 271 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 TAGLNQ01995 201 aaKnown RBP7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 FAM160A1Q05DH4 1040 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 RAD51AP2Q09MP3 1159 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 WASHC5Q12768 1159 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 RAPGEF1Q13905 1077 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 TTLL12Q14166 644 aaPredicted RBP7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 PRPF38AQ8NAV1 312 aaKnown RBP7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 SLC43A3Q8NBI5 491 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 TSC1Q92574 1164 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 BACH2Q9BYV9 841 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 NLRP2Q9NX02 1062 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 STK26Q9P289 416 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 MRPL42Q9Y6G3 142 aaKnown RBP7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 PTPRUQ92729 1446 aa7.3□□□□□ -1.24
SMARCE1-208ENST00000474246 ERBB4Q15303 1308 aa7.29□□□□□ -1.24
SMARCE1-208ENST00000474246 PDE6BP35913 854 aa7.29□□□□□ -1.24
SMARCE1-208ENST00000474246 DCTN1Q14203 1278 aa7.29□□□□□ -1.24
SMARCE1-208ENST00000474246 SAMD3Q8N6K7 520 aa7.29□□□□□ -1.24
SMARCE1-208ENST00000474246 RELTQ969Z4 430 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms