RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 SCNN1DP51172 638 aa22.24■■□□□ 1.15
LMNA-211ENST00000470199 POLA2Q14181 598 aa22.24■■□□□ 1.15
LMNA-211ENST00000470199 DDX19BQ9UMR2 479 aa22.24■■□□□ 1.15
LMNA-211ENST00000470199 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.24■■□□□ 1.15
LMNA-211ENST00000470199 SCN9AQ15858 1988 aa22.24■■□□□ 1.15
LMNA-211ENST00000470199 SHTN1A0MZ66 631 aa22.23■■□□□ 1.15
LMNA-211ENST00000470199 CIAO1O76071 339 aa22.23■■□□□ 1.15
LMNA-211ENST00000470199 GMPSP49915 693 aaPredicted RBP22.23■■□□□ 1.15
LMNA-211ENST00000470199 UBE4AQ14139 1066 aa22.23■■□□□ 1.15
LMNA-211ENST00000470199 CEP85Q6P2H3 762 aa22.23■■□□□ 1.15
LMNA-211ENST00000470199 C15orf52Q6ZUT6 534 aaKnown RBP22.23■■□□□ 1.15
LMNA-211ENST00000470199 POTEIP0CG38 1075 aa22.22■■□□□ 1.15
LMNA-211ENST00000470199 POTEJP0CG39 1038 aa22.22■■□□□ 1.15
LMNA-211ENST00000470199 EPS15P42566 896 aa22.22■■□□□ 1.15
LMNA-211ENST00000470199 GYG1P46976 350 aa22.22■■□□□ 1.15
LMNA-211ENST00000470199 TNIP1Q15025 636 aa22.22■■□□□ 1.15
LMNA-211ENST00000470199 SSH3Q8TE77 659 aa22.22■■□□□ 1.15
LMNA-211ENST00000470199 MXD3Q9BW11 206 aa22.22■■□□□ 1.15
LMNA-211ENST00000470199 COA1Q9GZY4 146 aa22.22■■□□□ 1.15
LMNA-211ENST00000470199 FGFR2P21802 821 aa22.21■■□□□ 1.15
LMNA-211ENST00000470199 PODNQ7Z5L7 613 aa22.21■■□□□ 1.15
LMNA-211ENST00000470199 TAF1DQ9H5J8 278 aaPredicted RBP22.21■■□□□ 1.15
LMNA-211ENST00000470199 CD209Q9NNX6 404 aa22.21■■□□□ 1.15
LMNA-211ENST00000470199 IL15P40933 162 aaPredicted RBP22.2■■□□□ 1.14
LMNA-211ENST00000470199 FAM84BQ96KN1 310 aaPredicted RBP22.2■■□□□ 1.14
LMNA-211ENST00000470199 HACL1Q9UJ83 578 aa22.2■■□□□ 1.14
LMNA-211ENST00000470199 FBXO3Q9UK99 471 aa22.2■■□□□ 1.14
LMNA-211ENST00000470199 VIL1P09327 827 aaKnown RBP22.19■■□□□ 1.14
LMNA-211ENST00000470199 TFCP2Q12800 502 aa22.19■■□□□ 1.14
LMNA-211ENST00000470199 SIRT2Q8IXJ6 389 aa22.19■■□□□ 1.14
LMNA-211ENST00000470199 CEP126Q9P2H0 1117 aa22.19■■□□□ 1.14
LMNA-211ENST00000470199 EPHX2P34913 555 aa22.18■■□□□ 1.14
LMNA-211ENST00000470199 PUM3Q15397 648 aaKnown RBP22.18■■□□□ 1.14
LMNA-211ENST00000470199 FBXW7Q969H0 707 aa22.18■■□□□ 1.14
LMNA-211ENST00000470199 GPRC5DQ9NZD1 345 aa22.18■■□□□ 1.14
LMNA-211ENST00000470199 JAG2Q9Y219 1238 aa22.18■■□□□ 1.14
LMNA-211ENST00000470199 IQCA1LA6NCM1 817 aa22.17■■□□□ 1.14
LMNA-211ENST00000470199 USP17L3A6NCW0 530 aa22.17■■□□□ 1.14
LMNA-211ENST00000470199 USP17L4A6NCW7 530 aa22.17■■□□□ 1.14
LMNA-211ENST00000470199 SASH1O94885 1247 aa22.17■■□□□ 1.14
LMNA-211ENST00000470199 GTF2IP78347 998 aa22.17■■□□□ 1.14
LMNA-211ENST00000470199 DACT2Q5SW24 774 aa22.17■■□□□ 1.14
LMNA-211ENST00000470199 USP17L1Q7RTZ2 530 aa22.17■■□□□ 1.14
LMNA-211ENST00000470199 ZNF804AQ7Z570 1209 aa22.17■■□□□ 1.14
LMNA-211ENST00000470199 TOMM70O94826 608 aa22.16■■□□□ 1.14
LMNA-211ENST00000470199 IL1R1P14778 569 aa22.16■■□□□ 1.14
LMNA-211ENST00000470199 HIBADHP31937 336 aaKnown RBP22.16■■□□□ 1.14
LMNA-211ENST00000470199 BCAMP50895 628 aa22.16■■□□□ 1.14
LMNA-211ENST00000470199 RSBN1LQ6PCB5 846 aaPredicted RBP22.16■■□□□ 1.14
LMNA-211ENST00000470199 FBXO33Q7Z6M2 555 aa22.16■■□□□ 1.14
LMNA-211ENST00000470199 C16orf71Q8IYS4 520 aaPredicted RBP22.16■■□□□ 1.14
LMNA-211ENST00000470199 CRBNQ96SW2 442 aa22.16■■□□□ 1.14
LMNA-211ENST00000470199 CNOT7Q9UIV1 285 aaKnown RBP22.16■■□□□ 1.14
LMNA-211ENST00000470199 IQSEC3Q9UPP2 1182 aaPredicted RBP22.16■■□□□ 1.14
LMNA-211ENST00000470199 SURF6O75683 361 aaKnown RBP22.15■■□□□ 1.14
LMNA-211ENST00000470199 LMOD1P29536 600 aaPredicted RBP22.15■■□□□ 1.14
LMNA-211ENST00000470199 ADORA1P30542 326 aa22.15■■□□□ 1.14
LMNA-211ENST00000470199 TIMM10P62072 90 aa22.15■■□□□ 1.14
LMNA-211ENST00000470199 G3BP1Q13283 466 aaKnown RBP eCLIP22.15■■□□□ 1.144e-10■■■□□ 15.7
LMNA-211ENST00000470199 ATP2B3Q16720 1220 aa22.15■■□□□ 1.14
LMNA-211ENST00000470199 EAPPQ56P03 285 aaPredicted RBP22.15■■□□□ 1.14
LMNA-211ENST00000470199 LPIN2Q92539 896 aa22.15■■□□□ 1.14
LMNA-211ENST00000470199 GMLQ99445 158 aa22.15■■□□□ 1.14
LMNA-211ENST00000470199 SUPT16HQ9Y5B9 1047 aaKnown RBP22.15■■□□□ 1.14
LMNA-211ENST00000470199 ZNF646O15015 1829 aaPredicted RBP22.15■■□□□ 1.14
LMNA-211ENST00000470199 SCN4AP35499 1836 aa22.15■■□□□ 1.14
LMNA-211ENST00000470199 EGFRP00533 1210 aa22.14■■□□□ 1.13
LMNA-211ENST00000470199 C1QTNF8P60827 252 aa22.14■■□□□ 1.13
LMNA-211ENST00000470199 TTLL5Q6EMB2 1281 aa22.14■■□□□ 1.13
LMNA-211ENST00000470199 MICALL2Q8IY33 904 aa22.14■■□□□ 1.13
LMNA-211ENST00000470199 TDRD7Q8NHU6 1098 aaKnown RBP22.14■■□□□ 1.13
LMNA-211ENST00000470199 IFIT1P09914 478 aaKnown RBP22.13■■□□□ 1.13
LMNA-211ENST00000470199 SLC5A1P13866 664 aa22.13■■□□□ 1.13
LMNA-211ENST00000470199 STRIP1Q5VSL9 837 aa22.13■■□□□ 1.13
LMNA-211ENST00000470199 CERS5Q8N5B7 392 aa22.13■■□□□ 1.13
LMNA-211ENST00000470199 TRPM4Q8TD43 1214 aa22.13■■□□□ 1.13
LMNA-211ENST00000470199 DPF2Q92785 391 aa22.13■■□□□ 1.13
LMNA-211ENST00000470199 NOP58Q9Y2X3 529 aaKnown RBP22.13■■□□□ 1.13
LMNA-211ENST00000470199 HIRAP54198 1017 aaPredicted RBP22.12■■□□□ 1.13
LMNA-211ENST00000470199 SAMD7Q7Z3H4 446 aa22.12■■□□□ 1.13
LMNA-211ENST00000470199 RPAP2Q8IXW5 612 aaPredicted RBP22.12■■□□□ 1.13
LMNA-211ENST00000470199 RBM46Q8TBY0 533 aaKnown RBP22.12■■□□□ 1.13
LMNA-211ENST00000470199 EXOC6BQ9Y2D4 811 aa22.12■■□□□ 1.13
LMNA-211ENST00000470199 PSME4Q14997 1843 aa22.12■■□□□ 1.13
LMNA-211ENST00000470199 RPS12P25398 132 aaKnown RBP22.11■■□□□ 1.13
LMNA-211ENST00000470199 CHMP4BQ9H444 224 aaKnown RBP22.11■■□□□ 1.13
LMNA-211ENST00000470199 ADARB2Q9NS39 739 aaKnown RBP22.11■■□□□ 1.13
LMNA-211ENST00000470199 A0A1B0GUL7 405 aa22.1■■□□□ 1.13
LMNA-211ENST00000470199 OS9Q13438 667 aaPredicted RBP22.1■■□□□ 1.13
LMNA-211ENST00000470199 TBC1D10BQ4KMP7 808 aaPredicted RBP22.1■■□□□ 1.13
LMNA-211ENST00000470199 CAVIN4Q5BKX8 364 aa22.1■■□□□ 1.13
LMNA-211ENST00000470199 RBM26Q5T8P6 1007 aaKnown RBP22.1■■□□□ 1.13
LMNA-211ENST00000470199 VPS37DQ86XT2 251 aa22.1■■□□□ 1.13
LMNA-211ENST00000470199 AGBL3Q8NEM8 1001 aa22.1■■□□□ 1.13
LMNA-211ENST00000470199 PHKA1P46020 1223 aa22.09■■□□□ 1.13
LMNA-211ENST00000470199 CLEC11AQ9Y240 323 aa22.09■■□□□ 1.13
LMNA-211ENST00000470199 ZNF609O15014 1411 aa22.08■■□□□ 1.13
LMNA-211ENST00000470199 ADAMTSL1Q8N6G6 1762 aa22.08■■□□□ 1.13
LMNA-211ENST00000470199 H7C1D1 291 aa22.08■■□□□ 1.13
LMNA-211ENST00000470199 CHAF1AQ13111 956 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms