RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 POLR2AP24928 1970 aaKnown RBP18.18■□□□□ 0.5
COL27A1-203ENST00000468565 KIF16BQ96L93 1317 aa18.18■□□□□ 0.5
COL27A1-203ENST00000468565 IRX6P78412 446 aaPredicted RBP18.17■□□□□ 0.5
COL27A1-203ENST00000468565 TAF7LQ5H9L4 462 aa18.17■□□□□ 0.5
COL27A1-203ENST00000468565 MICALL2Q8IY33 904 aa18.17■□□□□ 0.5
COL27A1-203ENST00000468565 ATXN8OSP0DMR3 200 aa18.17■□□□□ 0.5
COL27A1-203ENST00000468565 ZC3H15Q8WU90 426 aaKnown RBP18.17■□□□□ 0.5
COL27A1-203ENST00000468565 COA1Q9GZY4 146 aa18.17■□□□□ 0.5
COL27A1-203ENST00000468565 BICC1Q9H694 974 aaKnown RBP18.17■□□□□ 0.5
COL27A1-203ENST00000468565 PGAP2Q9UHJ9 254 aa18.17■□□□□ 0.5
COL27A1-203ENST00000468565 LDHAL6AQ6ZMR3 332 aa18.16■□□□□ 0.5
COL27A1-203ENST00000468565 AGBL3Q8NEM8 1001 aa18.16■□□□□ 0.5
COL27A1-203ENST00000468565 ARHGAP45Q92619 1136 aa18.16■□□□□ 0.5
COL27A1-203ENST00000468565 ZNF594Q96JF6 807 aaPredicted RBP18.16■□□□□ 0.5
COL27A1-203ENST00000468565 SHTN1A0MZ66 631 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 KCNJ4P48050 445 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 RSBN1LQ6PCB5 846 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-203ENST00000468565 ANKRD44Q8N8A2 993 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 TRPM4Q8TD43 1214 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 PPP4R2Q9NY27 417 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 USP17L3A6NCW0 530 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 USP17L4A6NCW7 530 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 TMEM88BA6NKF7 163 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 HIRAP54198 1017 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-203ENST00000468565 C15orf52Q6ZUT6 534 aaKnown RBP18.15■□□□□ 0.5
COL27A1-203ENST00000468565 USP17L1Q7RTZ2 530 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 TXNRD3Q86VQ6 643 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 CNNM1Q9NRU3 951 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 IRS2Q9Y4H2 1338 aa18.15■□□□□ 0.5
COL27A1-203ENST00000468565 TAF5LO75529 589 aa18.13■□□□□ 0.49
COL27A1-203ENST00000468565 JMYQ8N9B5 988 aa18.13■□□□□ 0.49
COL27A1-203ENST00000468565 KLRK1P26718 216 aa18.13■□□□□ 0.49
COL27A1-203ENST00000468565 SAMD7Q7Z3H4 446 aa18.13■□□□□ 0.49
COL27A1-203ENST00000468565 HELBQ8NG08 1087 aaPredicted RBP18.13■□□□□ 0.49
COL27A1-203ENST00000468565 STRIP1Q5VSL9 837 aa18.12■□□□□ 0.49
COL27A1-203ENST00000468565 GMLQ99445 158 aa18.12■□□□□ 0.49
COL27A1-203ENST00000468565 ZNF280AP59817 542 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-203ENST00000468565 MYO3BQ8WXR4 1341 aa18.11■□□□□ 0.49
COL27A1-203ENST00000468565 IPO8O15397 1037 aaKnown RBP18.11■□□□□ 0.49
COL27A1-203ENST00000468565 TBC1D10BQ4KMP7 808 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-203ENST00000468565 DACT2Q5SW24 774 aa18.11■□□□□ 0.49
COL27A1-203ENST00000468565 MROH5Q6ZUA9 1318 aa18.11■□□□□ 0.49
COL27A1-203ENST00000468565 SNAP23O00161 211 aa18.1■□□□□ 0.49
COL27A1-203ENST00000468565 UBTFL1P0CB47 393 aaPredicted RBP18.1■□□□□ 0.49
COL27A1-203ENST00000468565 KIF4BQ2VIQ3 1234 aa18.1■□□□□ 0.49
COL27A1-203ENST00000468565 INTS3Q68E01 1043 aaKnown RBP18.1■□□□□ 0.49
COL27A1-203ENST00000468565 CDC37L1Q7L3B6 337 aa18.1■□□□□ 0.49
COL27A1-203ENST00000468565 CD209Q9NNX6 404 aa18.1■□□□□ 0.49
COL27A1-203ENST00000468565 HDAC5Q9UQL6 1122 aa18.1■□□□□ 0.49
COL27A1-203ENST00000468565 RIPOR2Q9Y4F9 1068 aa18.1■□□□□ 0.49
COL27A1-203ENST00000468565 CNTNAP1P78357 1384 aa18.1■□□□□ 0.49
COL27A1-203ENST00000468565 EGFRP00533 1210 aa18.1■□□□□ 0.49
COL27A1-203ENST00000468565 USP17L8P0C7I0 530 aa18.1■□□□□ 0.49
COL27A1-203ENST00000468565 UBE4AQ14139 1066 aa18.1■□□□□ 0.49
COL27A1-203ENST00000468565 PUS3Q9BZE2 481 aaKnown RBP18.1■□□□□ 0.49
COL27A1-203ENST00000468565 TRAF5O00463 557 aa18.09■□□□□ 0.49
COL27A1-203ENST00000468565 MMP14P50281 582 aa18.09■□□□□ 0.49
COL27A1-203ENST00000468565 ZNF804AQ7Z570 1209 aa18.09■□□□□ 0.49
COL27A1-203ENST00000468565 GLIS2Q9BZE0 524 aaPredicted RBP18.09■□□□□ 0.49
COL27A1-203ENST00000468565 PLIN1O60240 522 aa18.08■□□□□ 0.49
COL27A1-203ENST00000468565 BCAR3O75815 825 aa18.08■□□□□ 0.49
COL27A1-203ENST00000468565 RBM26Q5T8P6 1007 aaKnown RBP18.08■□□□□ 0.49
COL27A1-203ENST00000468565 TTLL5Q6EMB2 1281 aa18.08■□□□□ 0.49
COL27A1-203ENST00000468565 ATF7IPQ6VMQ6 1270 aa18.08■□□□□ 0.49
COL27A1-203ENST00000468565 IL1R1P14778 569 aa18.08■□□□□ 0.48
COL27A1-203ENST00000468565 FMR1Q06787 632 aaKnown RBP eCLIP18.08■□□□□ 0.48
COL27A1-203ENST00000468565 MKRN1Q9UHC7 482 aaKnown RBP18.08■□□□□ 0.48
COL27A1-203ENST00000468565 ARAP2Q8WZ64 1704 aa18.07■□□□□ 0.48
COL27A1-203ENST00000468565 ECM29Q5VYK3 1845 aa18.07■□□□□ 0.48
COL27A1-203ENST00000468565 RASSF10A6NK89 507 aa18.07■□□□□ 0.48
COL27A1-203ENST00000468565 TRIM27P14373 513 aa18.07■□□□□ 0.48
COL27A1-203ENST00000468565 RFX5P48382 616 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-203ENST00000468565 FBXW7Q969H0 707 aa18.07■□□□□ 0.48
COL27A1-203ENST00000468565 MYOZ2Q9NPC6 264 aa18.07■□□□□ 0.48
COL27A1-203ENST00000468565 GTF2IP78347 998 aa18.06■□□□□ 0.48
COL27A1-203ENST00000468565 LRRC24Q50LG9 513 aa18.06■□□□□ 0.48
COL27A1-203ENST00000468565 DCPSQ96C86 337 aaKnown RBP18.06■□□□□ 0.48
COL27A1-203ENST00000468565 CST9Q5W186 159 aa18.06■□□□□ 0.48
COL27A1-203ENST00000468565 FRAT1Q92837 279 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-203ENST00000468565 MEIS3Q99687 375 aa18.06■□□□□ 0.48
COL27A1-203ENST00000468565 MXD3Q9BW11 206 aa18.06■□□□□ 0.48
COL27A1-203ENST00000468565 MYH13Q9UKX3 1938 aa18.05■□□□□ 0.48
COL27A1-203ENST00000468565 METTL24Q5JXM2 366 aa18.05■□□□□ 0.48
COL27A1-203ENST00000468565 OGFOD1Q8N543 542 aa18.05■□□□□ 0.48
COL27A1-203ENST00000468565 VGLL2Q8N8G2 317 aa18.05■□□□□ 0.48
COL27A1-203ENST00000468565 KLHDC4Q8TBB5 520 aa18.05■□□□□ 0.48
COL27A1-203ENST00000468565 ABT1Q9ULW3 272 aaKnown RBP18.05■□□□□ 0.48
COL27A1-203ENST00000468565 LRRFIP2Q9Y608 721 aaKnown RBP18.05■□□□□ 0.48
COL27A1-203ENST00000468565 PCNTO95613 3336 aa18.05■□□□□ 0.48
COL27A1-203ENST00000468565 PDE8BO95263 885 aa18.04■□□□□ 0.48
COL27A1-203ENST00000468565 GNAI3P08754 354 aa18.04■□□□□ 0.48
COL27A1-203ENST00000468565 FKBP1AP62942 108 aaKnown RBP18.04■□□□□ 0.48
COL27A1-203ENST00000468565 PTPN12Q05209 780 aaKnown RBP18.04■□□□□ 0.48
COL27A1-203ENST00000468565 ZKSCAN2Q63HK3 967 aa18.04■□□□□ 0.48
COL27A1-203ENST00000468565 KRT26Q7Z3Y9 468 aa18.04■□□□□ 0.48
COL27A1-203ENST00000468565 USP48Q86UV5 1035 aa18.04■□□□□ 0.48
COL27A1-203ENST00000468565 GGA3Q9NZ52 723 aa18.04■□□□□ 0.48
COL27A1-203ENST00000468565 FBXO3Q9UK99 471 aa18.04■□□□□ 0.48
COL27A1-203ENST00000468565 EYA2O00167 538 aa18.04■□□□□ 0.48
COL27A1-203ENST00000468565 CELF2O95319 508 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms