RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 RPS8P62241 208 aaKnown RBP13.49□□□□□ -0.25
HDAC3-203ENST00000467533 APOBEC3FQ8IUX4 373 aaKnown RBP13.49□□□□□ -0.25
HDAC3-203ENST00000467533 OGFOD1Q8N543 542 aa13.49□□□□□ -0.25
HDAC3-203ENST00000467533 XAGE3Q8WTP9 111 aa13.49□□□□□ -0.25
HDAC3-203ENST00000467533 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
HDAC3-203ENST00000467533 WNK4Q96J92 1243 aa13.49□□□□□ -0.25
HDAC3-203ENST00000467533 PTCH2Q9Y6C5 1203 aa13.49□□□□□ -0.25
HDAC3-203ENST00000467533 COL1A1P02452 1464 aaPredicted RBP13.48□□□□□ -0.25
HDAC3-203ENST00000467533 FBXW7Q969H0 707 aa13.48□□□□□ -0.25
HDAC3-203ENST00000467533 CAP1Q01518 475 aa13.47□□□□□ -0.25
HDAC3-203ENST00000467533 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
HDAC3-203ENST00000467533 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
HDAC3-203ENST00000467533 CLMNQ96JQ2 1002 aa13.47□□□□□ -0.25
HDAC3-203ENST00000467533 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
HDAC3-203ENST00000467533 ECM29Q5VYK3 1845 aa13.47□□□□□ -0.25
HDAC3-203ENST00000467533 ZSWIM8A7E2V4 1837 aa13.46□□□□□ -0.25
HDAC3-203ENST00000467533 SPEF2Q9C093 1822 aa13.46□□□□□ -0.25
HDAC3-203ENST00000467533 OTOFQ9HC10 1997 aa13.46□□□□□ -0.25
HDAC3-203ENST00000467533 PODNQ7Z5L7 613 aa13.46□□□□□ -0.25
HDAC3-203ENST00000467533 MXD3Q9BW11 206 aa13.46□□□□□ -0.25
HDAC3-203ENST00000467533 SSC5DA1L4H1 1573 aa13.45□□□□□ -0.26
HDAC3-203ENST00000467533 COL6A3P12111 3177 aa13.45□□□□□ -0.26
HDAC3-203ENST00000467533 XDHP47989 1333 aa13.45□□□□□ -0.26
HDAC3-203ENST00000467533 MYO3BQ8WXR4 1341 aa13.45□□□□□ -0.26
HDAC3-203ENST00000467533 SH3TC2Q8TF17 1288 aa13.45□□□□□ -0.26
HDAC3-203ENST00000467533 WTIPA6NIX2 430 aaPredicted RBP13.44□□□□□ -0.26
HDAC3-203ENST00000467533 IRS4O14654 1257 aaPredicted RBP13.44□□□□□ -0.26
HDAC3-203ENST00000467533 PPP1R12BO60237 982 aaPredicted RBP13.44□□□□□ -0.26
HDAC3-203ENST00000467533 SEC31BQ9NQW1 1179 aa13.44□□□□□ -0.26
HDAC3-203ENST00000467533 ATP5J2-PTCD1G3V325 749 aa13.43□□□□□ -0.26
HDAC3-203ENST00000467533 MAP3K11Q16584 847 aa13.43□□□□□ -0.26
HDAC3-203ENST00000467533 DACT2Q5SW24 774 aa13.43□□□□□ -0.26
HDAC3-203ENST00000467533 HTATIP2Q9BUP3 242 aa13.43□□□□□ -0.26
HDAC3-203ENST00000467533 PRO3102Q9H379 93 aa13.43□□□□□ -0.26
HDAC3-203ENST00000467533 RANBP2P49792 3224 aaKnown RBP13.43□□□□□ -0.26
HDAC3-203ENST00000467533 SOX1O00570 391 aaPredicted RBP13.42□□□□□ -0.26
HDAC3-203ENST00000467533 ATP2B4P23634 1241 aa13.42□□□□□ -0.26
HDAC3-203ENST00000467533 GJA5P36382 358 aa13.42□□□□□ -0.26
HDAC3-203ENST00000467533 NFE2L2Q16236 605 aa13.42□□□□□ -0.26
HDAC3-203ENST00000467533 SHISA4Q96DD7 197 aa13.42□□□□□ -0.26
HDAC3-203ENST00000467533 LRCH3Q96II8 777 aa13.42□□□□□ -0.26
HDAC3-203ENST00000467533 PTPN18Q99952 460 aa13.42□□□□□ -0.26
HDAC3-203ENST00000467533 ISCA1Q9BUE6 129 aa13.42□□□□□ -0.26
HDAC3-203ENST00000467533 DEFB129Q9H1M3 183 aa13.42□□□□□ -0.26
HDAC3-203ENST00000467533 MED23Q9ULK4 1368 aa13.42□□□□□ -0.26
HDAC3-203ENST00000467533 A0A0C4DFX4 3053 aa13.42□□□□□ -0.26
HDAC3-203ENST00000467533 A0A1W2PPC1 479 aa13.41□□□□□ -0.26
HDAC3-203ENST00000467533 TAF1CQ15572 869 aaPredicted RBP13.41□□□□□ -0.26
HDAC3-203ENST00000467533 PLBD2Q8NHP8 589 aa13.41□□□□□ -0.26
HDAC3-203ENST00000467533 NR2E3Q9Y5X4 410 aa13.41□□□□□ -0.26
HDAC3-203ENST00000467533 UNCXA6NJT0 531 aa13.4□□□□□ -0.26
HDAC3-203ENST00000467533 IREB2P48200 963 aaKnown RBP13.4□□□□□ -0.26
HDAC3-203ENST00000467533 CCDC152Q4G0S7 254 aa13.4□□□□□ -0.26
HDAC3-203ENST00000467533 STRIP1Q5VSL9 837 aa13.4□□□□□ -0.26
HDAC3-203ENST00000467533 KIAA0825Q8IV33 1275 aa13.4□□□□□ -0.26
HDAC3-203ENST00000467533 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
HDAC3-203ENST00000467533 ZFYVE28Q9HCC9 887 aa13.4□□□□□ -0.26
HDAC3-203ENST00000467533 TESPA1A2RU30 521 aaPredicted RBP13.39□□□□□ -0.27
HDAC3-203ENST00000467533 PPP2R1AP30153 589 aa13.39□□□□□ -0.27
HDAC3-203ENST00000467533 MMP14P50281 582 aa13.39□□□□□ -0.27
HDAC3-203ENST00000467533 KIF22Q14807 665 aa13.39□□□□□ -0.27
HDAC3-203ENST00000467533 ANKRD18AQ8IVF6 992 aa13.39□□□□□ -0.27
HDAC3-203ENST00000467533 ANKRD13AQ8IZ07 590 aa13.39□□□□□ -0.27
HDAC3-203ENST00000467533 CHPF2Q9P2E5 772 aa13.39□□□□□ -0.27
HDAC3-203ENST00000467533 PPP2R3BQ9Y5P8 575 aa13.39□□□□□ -0.27
HDAC3-203ENST00000467533 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
HDAC3-203ENST00000467533 ZBTB7BO15156 539 aaPredicted RBP13.38□□□□□ -0.27
HDAC3-203ENST00000467533 HSP90B1P14625 803 aaKnown RBP13.38□□□□□ -0.27
HDAC3-203ENST00000467533 MTFR1Q15390 333 aa13.38□□□□□ -0.27
HDAC3-203ENST00000467533 SUPT20HL1Q3ZLR7 823 aa13.38□□□□□ -0.27
HDAC3-203ENST00000467533 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
HDAC3-203ENST00000467533 NKX2-3Q8TAU0 364 aa13.38□□□□□ -0.27
HDAC3-203ENST00000467533 OPTNQ96CV9 577 aa13.38□□□□□ -0.27
HDAC3-203ENST00000467533 COL25A1Q9BXS0 654 aaPredicted RBP13.38□□□□□ -0.27
HDAC3-203ENST00000467533 ELP3Q9H9T3 547 aa13.38□□□□□ -0.27
HDAC3-203ENST00000467533 CLSPNQ9HAW4 1339 aa13.38□□□□□ -0.27
HDAC3-203ENST00000467533 DLGAP5Q15398 846 aa13.37□□□□□ -0.27
HDAC3-203ENST00000467533 ZBED3Q96IU2 234 aaPredicted RBP13.37□□□□□ -0.27
HDAC3-203ENST00000467533 ARHGAP39Q9C0H5 1083 aa13.37□□□□□ -0.27
HDAC3-203ENST00000467533 COA1Q9GZY4 146 aa13.37□□□□□ -0.27
HDAC3-203ENST00000467533 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
HDAC3-203ENST00000467533 CCL15-CCL14A0A0B4J2E2 113 aa13.36□□□□□ -0.27
HDAC3-203ENST00000467533 WDHD1O75717 1129 aaPredicted RBP13.36□□□□□ -0.27
HDAC3-203ENST00000467533 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
HDAC3-203ENST00000467533 CCL15Q16663 113 aa13.36□□□□□ -0.27
HDAC3-203ENST00000467533 TTLL5Q6EMB2 1281 aa13.36□□□□□ -0.27
HDAC3-203ENST00000467533 DEFB123Q8N688 67 aa13.36□□□□□ -0.27
HDAC3-203ENST00000467533 ZBTB38Q8NAP3 1195 aaPredicted RBP13.36□□□□□ -0.27
HDAC3-203ENST00000467533 BRI3BPQ8WY22 251 aa13.36□□□□□ -0.27
HDAC3-203ENST00000467533 VEZTQ9HBM0 779 aa13.36□□□□□ -0.27
HDAC3-203ENST00000467533 MYH3P11055 1940 aa13.35□□□□□ -0.27
HDAC3-203ENST00000467533 CLRN2A0PK11 232 aa13.35□□□□□ -0.27
HDAC3-203ENST00000467533 MYO1BO43795 1136 aa13.35□□□□□ -0.27
HDAC3-203ENST00000467533 PRMT2P55345 433 aa13.35□□□□□ -0.27
HDAC3-203ENST00000467533 LACTBP83111 547 aaPredicted RBP13.35□□□□□ -0.27
HDAC3-203ENST00000467533 NBPF12Q5TAG4 269 aaPredicted RBP13.35□□□□□ -0.27
HDAC3-203ENST00000467533 MS4A4AQ96JQ5 239 aa13.35□□□□□ -0.27
HDAC3-203ENST00000467533 PLEKHF1Q96S99 279 aa13.35□□□□□ -0.27
HDAC3-203ENST00000467533 STXBP5LQ9Y2K9 1186 aa13.35□□□□□ -0.27
HDAC3-203ENST00000467533 PDE8AO60658 829 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms