RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 GPSM2P81274 684 aa16.95■□□□□ 0.3
UBR4-210ENST00000466969 GIGYF2Q6Y7W6 1299 aaKnown RBP16.95■□□□□ 0.3
UBR4-210ENST00000466969 POLR3GLQ9BT43 218 aa16.95■□□□□ 0.3
UBR4-210ENST00000466969 LRRC37AA6NMS7 1700 aa16.95■□□□□ 0.3
UBR4-210ENST00000466969 LAMB1P07942 1786 aa16.94■□□□□ 0.3
UBR4-210ENST00000466969 ANKRD36CQ5JPF3 1778 aa16.94■□□□□ 0.3
UBR4-210ENST00000466969 PRUNE2Q8WUY3 3088 aa16.94■□□□□ 0.3
UBR4-210ENST00000466969 TESPA1A2RU30 521 aaPredicted RBP16.94■□□□□ 0.3
UBR4-210ENST00000466969 PPP1R12BO60237 982 aaPredicted RBP16.94■□□□□ 0.3
UBR4-210ENST00000466969 APOBEC3FQ8IUX4 373 aaKnown RBP16.94■□□□□ 0.3
UBR4-210ENST00000466969 OGFOD1Q8N543 542 aa16.94■□□□□ 0.3
UBR4-210ENST00000466969 TBC1D16Q8TBP0 767 aa16.94■□□□□ 0.3
UBR4-210ENST00000466969 GMLQ99445 158 aa16.94■□□□□ 0.3
UBR4-210ENST00000466969 RRP7AQ9Y3A4 280 aaKnown RBP16.94■□□□□ 0.3
UBR4-210ENST00000466969 UNCXA6NJT0 531 aa16.93■□□□□ 0.3
UBR4-210ENST00000466969 WNT10BO00744 389 aa16.93■□□□□ 0.3
UBR4-210ENST00000466969 WDHD1O75717 1129 aaPredicted RBP16.93■□□□□ 0.3
UBR4-210ENST00000466969 MAP3K11Q16584 847 aa16.93■□□□□ 0.3
UBR4-210ENST00000466969 U2AF1L4Q8WU68 220 aaKnown RBP16.93■□□□□ 0.3
UBR4-210ENST00000466969 FAM161BQ96MY7 647 aa16.93■□□□□ 0.3
UBR4-210ENST00000466969 BIN2Q9UBW5 565 aaPredicted RBP16.93■□□□□ 0.3
UBR4-210ENST00000466969 ECM2O94769 699 aaPredicted RBP16.92■□□□□ 0.3
UBR4-210ENST00000466969 MYL6BP14649 208 aa16.92■□□□□ 0.3
UBR4-210ENST00000466969 GRK4P32298 578 aa16.92■□□□□ 0.3
UBR4-210ENST00000466969 UBXN2AP68543 259 aa16.92■□□□□ 0.3
UBR4-210ENST00000466969 MAP3K12Q12852 859 aa16.92■□□□□ 0.3
UBR4-210ENST00000466969 FAM109BQ6ICB4 259 aaPredicted RBP16.92■□□□□ 0.3
UBR4-210ENST00000466969 MAFAQ8NHW3 353 aaPredicted RBP16.92■□□□□ 0.3
UBR4-210ENST00000466969 ARHGAP39Q9C0H5 1083 aa16.92■□□□□ 0.3
UBR4-210ENST00000466969 LAMB2P55268 1798 aa16.92■□□□□ 0.3
UBR4-210ENST00000466969 LACTBP83111 547 aaPredicted RBP16.91■□□□□ 0.3
UBR4-210ENST00000466969 RAET1EQ8TD07 263 aa16.91■□□□□ 0.3
UBR4-210ENST00000466969 ZMYND8Q9ULU4 1186 aaPredicted RBP16.91■□□□□ 0.3
UBR4-210ENST00000466969 USP17L3A6NCW0 530 aa16.9■□□□□ 0.3
UBR4-210ENST00000466969 USP17L4A6NCW7 530 aa16.9■□□□□ 0.3
UBR4-210ENST00000466969 DIAPH1O60610 1272 aaKnown RBP16.9■□□□□ 0.3
UBR4-210ENST00000466969 USP17L1Q7RTZ2 530 aa16.9■□□□□ 0.3
UBR4-210ENST00000466969 SNX27Q96L92 541 aa16.9■□□□□ 0.3
UBR4-210ENST00000466969 TRIM47Q96LD4 638 aa16.9■□□□□ 0.3
UBR4-210ENST00000466969 UBE2OQ9C0C9 1292 aaKnown RBP16.9■□□□□ 0.3
UBR4-210ENST00000466969 POTEB2H3BUK9 544 aa16.89■□□□□ 0.29
UBR4-210ENST00000466969 SGPL1O95470 568 aa16.89■□□□□ 0.29
UBR4-210ENST00000466969 GJA5P36382 358 aa16.89■□□□□ 0.29
UBR4-210ENST00000466969 C7orf61Q8IZ16 206 aa16.89■□□□□ 0.29
UBR4-210ENST00000466969 RIPOR2Q9Y4F9 1068 aa16.89■□□□□ 0.29
UBR4-210ENST00000466969 SASH1O94885 1247 aa16.88■□□□□ 0.29
UBR4-210ENST00000466969 CAPN2P17655 700 aa16.88■□□□□ 0.29
UBR4-210ENST00000466969 HOXD10P28358 340 aa16.88■□□□□ 0.29
UBR4-210ENST00000466969 MAGEA10P43363 369 aaPredicted RBP16.88■□□□□ 0.29
UBR4-210ENST00000466969 CELF1Q92879 486 aaKnown RBP16.88■□□□□ 0.29
UBR4-210ENST00000466969 UFL1O94874 794 aa16.87■□□□□ 0.29
UBR4-210ENST00000466969 TFRCP02786 760 aaKnown RBP16.87■□□□□ 0.29
UBR4-210ENST00000466969 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
UBR4-210ENST00000466969 ZNF697Q5TEC3 545 aa16.87■□□□□ 0.29
UBR4-210ENST00000466969 SRRDQ9UH36 339 aa16.87■□□□□ 0.29
UBR4-210ENST00000466969 COL1A1P02452 1464 aaPredicted RBP16.86■□□□□ 0.29
UBR4-210ENST00000466969 TLR2O60603 784 aa16.86■□□□□ 0.29
UBR4-210ENST00000466969 TJAP1Q5JTD0 557 aa16.86■□□□□ 0.29
UBR4-210ENST00000466969 ANKRD13AQ8IZ07 590 aa16.86■□□□□ 0.29
UBR4-210ENST00000466969 RTF1Q92541 710 aaKnown RBP16.86■□□□□ 0.29
UBR4-210ENST00000466969 DEFB129Q9H1M3 183 aa16.86■□□□□ 0.29
UBR4-210ENST00000466969 TRMT112Q9UI30 125 aaKnown RBP16.86■□□□□ 0.29
UBR4-210ENST00000466969 SH3TC1Q8TE82 1336 aa16.86■□□□□ 0.29
UBR4-210ENST00000466969 ZSWIM8A7E2V4 1837 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 PSME4Q14997 1843 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 CCL15-CCL14A0A0B4J2E2 113 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 SYN1P17600 705 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 CCL15Q16663 113 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 BRI3BPQ8WY22 251 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 OPTNQ96CV9 577 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 MS4A4AQ96JQ5 239 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 PANK3Q9H999 370 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 ANKIB1Q9P2G1 1089 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 GGA1Q9UJY5 639 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 SYNGAP1Q96PV0 1343 aa16.85■□□□□ 0.29
UBR4-210ENST00000466969 SUPT20HL1Q3ZLR7 823 aa16.84■□□□□ 0.29
UBR4-210ENST00000466969 PODNQ7Z5L7 613 aa16.84■□□□□ 0.29
UBR4-210ENST00000466969 NECAB2Q7Z6G3 386 aa16.84■□□□□ 0.29
UBR4-210ENST00000466969 PAWRQ96IZ0 340 aaKnown RBP16.84■□□□□ 0.29
UBR4-210ENST00000466969 CDX2Q99626 313 aaPredicted RBP16.84■□□□□ 0.29
UBR4-210ENST00000466969 PODXL2Q9NZ53 605 aa16.84■□□□□ 0.29
UBR4-210ENST00000466969 LAMA2P24043 3122 aaKnown RBP16.84■□□□□ 0.29
UBR4-210ENST00000466969 MMP14P50281 582 aa16.83■□□□□ 0.28
UBR4-210ENST00000466969 GTF2A2P52657 109 aa16.83■□□□□ 0.28
UBR4-210ENST00000466969 FAM43AQ8N2R8 423 aa16.83■□□□□ 0.28
UBR4-210ENST00000466969 HELBQ8NG08 1087 aaPredicted RBP16.83■□□□□ 0.28
UBR4-210ENST00000466969 UNC93B1Q9H1C4 597 aa16.83■□□□□ 0.28
UBR4-210ENST00000466969 MYPNQ86TC9 1320 aa16.82■□□□□ 0.28
UBR4-210ENST00000466969 MYO3BQ8WXR4 1341 aa16.82■□□□□ 0.28
UBR4-210ENST00000466969 U2SURPO15042 1029 aaKnown RBP16.82■□□□□ 0.28
UBR4-210ENST00000466969 FMNL1O95466 1100 aaPredicted RBP16.82■□□□□ 0.28
UBR4-210ENST00000466969 PSMC4P43686 418 aa16.82■□□□□ 0.28
UBR4-210ENST00000466969 ELP3Q9H9T3 547 aa16.82■□□□□ 0.28
UBR4-210ENST00000466969 PPP2R3BQ9Y5P8 575 aa16.82■□□□□ 0.28
UBR4-210ENST00000466969 FAM205AQ6ZU69 1335 aa16.81■□□□□ 0.28
UBR4-210ENST00000466969 ALPK3Q96L96 1907 aa16.81■□□□□ 0.28
UBR4-210ENST00000466969 OSBPP22059 807 aa16.81■□□□□ 0.28
UBR4-210ENST00000466969 HSP90AB3PQ58FF7 597 aa16.81■□□□□ 0.28
UBR4-210ENST00000466969 MCM10Q7L590 875 aa16.81■□□□□ 0.28
UBR4-210ENST00000466969 NLRP10Q86W26 655 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1039.1 ms