RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 UTRNP46939 3433 aa19.74■□□□□ 0.75
GPC1-207ENST00000466624 IFIT1P09914 478 aaKnown RBP19.74■□□□□ 0.75
GPC1-207ENST00000466624 SLC5A1P13866 664 aa19.74■□□□□ 0.75
GPC1-207ENST00000466624 AOC3Q16853 763 aa19.74■□□□□ 0.75
GPC1-207ENST00000466624 ZC3H4Q9UPT8 1303 aaKnown RBP19.74■□□□□ 0.75
GPC1-207ENST00000466624 COL4A5P29400 1685 aa19.73■□□□□ 0.75
GPC1-207ENST00000466624 WTIPA6NIX2 430 aaPredicted RBP19.73■□□□□ 0.75
GPC1-207ENST00000466624 SNAP23O00161 211 aa19.73■□□□□ 0.75
GPC1-207ENST00000466624 LARGE2Q8N3Y3 721 aa19.73■□□□□ 0.75
GPC1-207ENST00000466624 A0A1B0GUL7 405 aa19.72■□□□□ 0.75
GPC1-207ENST00000466624 TNNI3KQ59H18 835 aa19.72■□□□□ 0.75
GPC1-207ENST00000466624 SMC5Q8IY18 1101 aa19.72■□□□□ 0.75
GPC1-207ENST00000466624 GPR101Q96P66 508 aaPredicted RBP19.72■□□□□ 0.75
GPC1-207ENST00000466624 LRRCC1Q9C099 1032 aa19.72■□□□□ 0.75
GPC1-207ENST00000466624 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.72■□□□□ 0.75
GPC1-207ENST00000466624 FPGT-TNNI3KV9GXZ4 949 aa19.72■□□□□ 0.75
GPC1-207ENST00000466624 MYH13Q9UKX3 1938 aa19.72■□□□□ 0.75
GPC1-207ENST00000466624 RIMBP2O15034 1052 aa19.71■□□□□ 0.75
GPC1-207ENST00000466624 IGHDP01880 384 aa19.71■□□□□ 0.75
GPC1-207ENST00000466624 KLRK1P26718 216 aa19.71■□□□□ 0.75
GPC1-207ENST00000466624 C9orf131Q5VYM1 1079 aa19.71■□□□□ 0.75
GPC1-207ENST00000466624 TXNRD3Q86VQ6 643 aa19.71■□□□□ 0.75
GPC1-207ENST00000466624 JDP2Q8WYK2 163 aa19.71■□□□□ 0.75
GPC1-207ENST00000466624 COA1Q9GZY4 146 aa19.71■□□□□ 0.75
GPC1-207ENST00000466624 RNF181Q9P0P0 153 aa19.71■□□□□ 0.75
GPC1-207ENST00000466624 ZBTB22O15209 634 aa19.7■□□□□ 0.74
GPC1-207ENST00000466624 CAVIN4Q5BKX8 364 aa19.7■□□□□ 0.74
GPC1-207ENST00000466624 ZNF804AQ7Z570 1209 aa19.7■□□□□ 0.74
GPC1-207ENST00000466624 NIM1KQ8IY84 436 aa19.7■□□□□ 0.74
GPC1-207ENST00000466624 CLASRPQ8N2M8 674 aaKnown RBP19.7■□□□□ 0.74
GPC1-207ENST00000466624 SCN9AQ15858 1988 aa19.7■□□□□ 0.74
GPC1-207ENST00000466624 ZNF646O15015 1829 aaPredicted RBP19.69■□□□□ 0.74
GPC1-207ENST00000466624 TIMM10P62072 90 aa19.69■□□□□ 0.74
GPC1-207ENST00000466624 PODNQ7Z5L7 613 aa19.69■□□□□ 0.74
GPC1-207ENST00000466624 FBXO33Q7Z6M2 555 aa19.69■□□□□ 0.74
GPC1-207ENST00000466624 FAM84BQ96KN1 310 aaPredicted RBP19.69■□□□□ 0.74
GPC1-207ENST00000466624 FZD9O00144 591 aa19.68■□□□□ 0.74
GPC1-207ENST00000466624 APBB1O00213 710 aa19.68■□□□□ 0.74
GPC1-207ENST00000466624 ECE2O60344 883 aa19.68■□□□□ 0.74
GPC1-207ENST00000466624 EAF2Q96CJ1 260 aaPredicted RBP19.68■□□□□ 0.74
GPC1-207ENST00000466624 XAGE2Q96GT9 111 aa19.68■□□□□ 0.74
GPC1-207ENST00000466624 ZNRF3Q9ULT6 936 aa19.68■□□□□ 0.74
GPC1-207ENST00000466624 G3V3G9 751 aa19.67■□□□□ 0.74
GPC1-207ENST00000466624 IL1R1P14778 569 aa19.67■□□□□ 0.74
GPC1-207ENST00000466624 HIBADHP31937 336 aaKnown RBP19.67■□□□□ 0.74
GPC1-207ENST00000466624 GYG1P46976 350 aa19.67■□□□□ 0.74
GPC1-207ENST00000466624 DCAF8Q5TAQ9 597 aa19.67■□□□□ 0.74
GPC1-207ENST00000466624 NEUROD6Q96NK8 337 aa19.67■□□□□ 0.74
GPC1-207ENST00000466624 DBNDD1Q9H9R9 158 aa19.67■□□□□ 0.74
GPC1-207ENST00000466624 CD209Q9NNX6 404 aa19.67■□□□□ 0.74
GPC1-207ENST00000466624 IL1RAPL2Q9NP60 686 aa19.67■□□□□ 0.74
GPC1-207ENST00000466624 DOK7Q18PE1 504 aa19.66■□□□□ 0.74
GPC1-207ENST00000466624 VPS37DQ86XT2 251 aa19.66■□□□□ 0.74
GPC1-207ENST00000466624 YDJCA8MPS7 323 aa19.65■□□□□ 0.74
GPC1-207ENST00000466624 ADORA1P30542 326 aa19.65■□□□□ 0.74
GPC1-207ENST00000466624 AACSQ86V21 672 aa19.65■□□□□ 0.74
GPC1-207ENST00000466624 TDRD7Q8NHU6 1098 aaKnown RBP19.65■□□□□ 0.74
GPC1-207ENST00000466624 DBNLQ9UJU6 430 aaKnown RBP19.65■□□□□ 0.74
GPC1-207ENST00000466624 SEMA3EO15041 775 aa19.64■□□□□ 0.73
GPC1-207ENST00000466624 BCAMP50895 628 aa19.64■□□□□ 0.73
GPC1-207ENST00000466624 EIF6P56537 245 aaKnown RBP19.64■□□□□ 0.73
GPC1-207ENST00000466624 CCDC102BQ68D86 513 aa19.64■□□□□ 0.73
GPC1-207ENST00000466624 DBNDD2Q9BQY9 259 aa19.64■□□□□ 0.73
GPC1-207ENST00000466624 GNL3LQ9NVN8 582 aaKnown RBP19.64■□□□□ 0.73
GPC1-207ENST00000466624 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.73
GPC1-207ENST00000466624 AKAP11Q9UKA4 1901 aa19.63■□□□□ 0.73
GPC1-207ENST00000466624 KDM2BQ8NHM5 1336 aa19.63■□□□□ 0.73
GPC1-207ENST00000466624 SMARCA5O60264 1052 aaPredicted RBP19.63■□□□□ 0.73
GPC1-207ENST00000466624 IFIT2P09913 472 aaKnown RBP19.63■□□□□ 0.73
GPC1-207ENST00000466624 GORABQ5T7V8 394 aa19.63■□□□□ 0.73
GPC1-207ENST00000466624 ANKRD45Q5TZF3 282 aa19.63■□□□□ 0.73
GPC1-207ENST00000466624 ZNF512BQ96KM6 892 aaPredicted RBP19.63■□□□□ 0.73
GPC1-207ENST00000466624 CCDC8Q9H0W5 538 aaPredicted RBP19.63■□□□□ 0.73
GPC1-207ENST00000466624 PPP4R2Q9NY27 417 aa19.63■□□□□ 0.73
GPC1-207ENST00000466624 PDS5AQ29RF7 1337 aaKnown RBP19.62■□□□□ 0.73
GPC1-207ENST00000466624 ARID4AP29374 1257 aaPredicted RBP19.62■□□□□ 0.73
GPC1-207ENST00000466624 PHKA1P46020 1223 aa19.62■□□□□ 0.73
GPC1-207ENST00000466624 NUCB1Q02818 461 aa19.62■□□□□ 0.73
GPC1-207ENST00000466624 CCDC158Q5M9N0 1113 aa19.62■□□□□ 0.73
GPC1-207ENST00000466624 CENPQQ7L2Z9 268 aaPredicted RBP19.62■□□□□ 0.73
GPC1-207ENST00000466624 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
GPC1-207ENST00000466624 TLR7Q9NYK1 1049 aaKnown RBP19.62■□□□□ 0.73
GPC1-207ENST00000466624 FAM205AQ6ZU69 1335 aa19.61■□□□□ 0.73
GPC1-207ENST00000466624 ZNF541Q9H0D2 1346 aa19.61■□□□□ 0.73
GPC1-207ENST00000466624 UQCRFS1P1P0C7P4 283 aa19.61■□□□□ 0.73
GPC1-207ENST00000466624 CXCL9Q07325 125 aa19.61■□□□□ 0.73
GPC1-207ENST00000466624 TNIP1Q15025 636 aa19.61■□□□□ 0.73
GPC1-207ENST00000466624 STRIP1Q5VSL9 837 aa19.61■□□□□ 0.73
GPC1-207ENST00000466624 CIAPIN1Q6FI81 312 aa19.61■□□□□ 0.73
GPC1-207ENST00000466624 USP17L3A6NCW0 530 aa19.6■□□□□ 0.73
GPC1-207ENST00000466624 USP17L4A6NCW7 530 aa19.6■□□□□ 0.73
GPC1-207ENST00000466624 DPY19L2Q6NUT2 758 aa19.6■□□□□ 0.73
GPC1-207ENST00000466624 USP17L1Q7RTZ2 530 aa19.6■□□□□ 0.73
GPC1-207ENST00000466624 CHD1LQ86WJ1 897 aa19.6■□□□□ 0.73
GPC1-207ENST00000466624 GPC2Q8N158 579 aa19.6■□□□□ 0.73
GPC1-207ENST00000466624 DENND2AQ9ULE3 1009 aa19.6■□□□□ 0.73
GPC1-207ENST00000466624 VIL1P09327 827 aaKnown RBP19.59■□□□□ 0.73
GPC1-207ENST00000466624 FKBP1AP62942 108 aaKnown RBP19.59■□□□□ 0.73
GPC1-207ENST00000466624 TTC39AQ5SRH9 613 aa19.59■□□□□ 0.73
GPC1-207ENST00000466624 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms