RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 MCF2L2Q86YR7 1114 aa10.95□□□□□ -0.66
SCAF11-205ENST00000465950 EP400NLQ6ZTU2 488 aa10.95□□□□□ -0.66
SCAF11-205ENST00000465950 CALML4Q96GE6 196 aa10.95□□□□□ -0.66
SCAF11-205ENST00000465950 SLC15A2Q16348 729 aa10.95□□□□□ -0.66
SCAF11-205ENST00000465950 LMBR1LQ6UX01 489 aa10.95□□□□□ -0.66
SCAF11-205ENST00000465950 STX8Q9UNK0 236 aa10.95□□□□□ -0.66
SCAF11-205ENST00000465950 STK38Q15208 465 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 ZBTB33Q86T24 672 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 RAET1EQ8TD07 263 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 PIBF1Q8WXW3 757 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 CCDC102AQ96A19 550 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 RRP36Q96EU6 259 aaKnown RBP10.94□□□□□ -0.66
SCAF11-205ENST00000465950 SYNMO15061 1565 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-205ENST00000465950 RPS12P25398 132 aaKnown RBP10.94□□□□□ -0.66
SCAF11-205ENST00000465950 PODXL2Q9NZ53 605 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 CD2APQ9Y5K6 639 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 CAMSAP1Q5T5Y3 1602 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 LMNB1P20700 586 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 NLRP5P59047 1200 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 ECHDC1Q9NTX5 307 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 DNMT1P26358 1616 aaKnown RBP10.94□□□□□ -0.66
SCAF11-205ENST00000465950 ADGBQ8N7X0 1667 aa10.94□□□□□ -0.66
SCAF11-205ENST00000465950 SNX16P57768 344 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 LPIN2Q92539 896 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 ARHGAP45Q92619 1136 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 DDX17Q92841 729 aaKnown RBP10.93□□□□□ -0.66
SCAF11-205ENST00000465950 TCP11L1Q9NUJ3 509 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 SLC4A4Q9Y6R1 1079 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 NUCB2P80303 420 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 FAM193BQ96PV7 902 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-205ENST00000465950 METTL22Q9BUU2 404 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-205ENST00000465950 LRFN2Q9ULH4 789 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 CARMIL3Q8ND23 1372 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 MSANTD4Q8NCY6 345 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 CCDC17Q96LX7 622 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 JPH2Q9BR39 696 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-205ENST00000465950 TCHPQ9BT92 498 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 MCM9Q9NXL9 1143 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 USP17L3A6NCW0 530 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 USP17L4A6NCW7 530 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 RRP1P56182 461 aaKnown RBP10.93□□□□□ -0.66
SCAF11-205ENST00000465950 KMT5BQ4FZB7 885 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 TTLL5Q6EMB2 1281 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 USP17L1Q7RTZ2 530 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 NUTM1Q86Y26 1132 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 SMARCE1Q969G3 411 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 LZTS2Q9BRK4 669 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 IMPG2Q9BZV3 1241 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 COA1Q9GZY4 146 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 CHPF2Q9P2E5 772 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 TTF2Q9UNY4 1162 aaKnown RBP10.93□□□□□ -0.66
SCAF11-205ENST00000465950 CALML3P27482 149 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 GNA11P29992 359 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 CDR1P51861 262 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 SLC8A3P57103 927 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 SSRP1Q08945 709 aaKnown RBP10.93□□□□□ -0.66
SCAF11-205ENST00000465950 BRIP1Q9BX63 1249 aa10.93□□□□□ -0.66
SCAF11-205ENST00000465950 RBM28Q9NW13 759 aaKnown RBP10.93□□□□□ -0.66
SCAF11-205ENST00000465950 VPS37CA5D8V6 355 aaPredicted RBP10.92□□□□□ -0.66
SCAF11-205ENST00000465950 ZNHIT6Q9NWK9 470 aaKnown RBP10.92□□□□□ -0.66
SCAF11-205ENST00000465950 BACH1O14867 736 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 PRKG1Q13976 671 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 CEP57L1Q8IYX8 460 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 NCOA7Q8NI08 942 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 HMG20BQ9P0W2 317 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 NARFQ9UHQ1 456 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 TBCAO75347 108 aaKnown RBP10.92□□□□□ -0.66
SCAF11-205ENST00000465950 PDE4CQ08493 712 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 FAM47CQ5HY64 1035 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 BICD1Q96G01 975 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 TBC1D2Q9BYX2 928 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 MIS18AQ9NYP9 233 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 POLKQ9UBT6 870 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 MTHFSDQ2M296 383 aaKnown RBP10.92□□□□□ -0.66
SCAF11-205ENST00000465950 ZBED2Q9BTP6 218 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 ZNF341Q9BYN7 854 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 DHX36Q9H2U1 1008 aaKnown RBP10.92□□□□□ -0.66
SCAF11-205ENST00000465950 FBXO40Q9UH90 709 aa10.92□□□□□ -0.66
SCAF11-205ENST00000465950 USP17L8P0C7I0 530 aa10.91□□□□□ -0.66
SCAF11-205ENST00000465950 RAB3GAP1Q15042 981 aa10.91□□□□□ -0.66
SCAF11-205ENST00000465950 MAP3K15Q6ZN16 1313 aa10.91□□□□□ -0.66
SCAF11-205ENST00000465950 ABCA9Q8IUA7 1624 aa10.91□□□□□ -0.66
SCAF11-205ENST00000465950 EIF5P55010 431 aaKnown RBP10.91□□□□□ -0.66
SCAF11-205ENST00000465950 HMGN5P82970 282 aaKnown RBP10.91□□□□□ -0.66
SCAF11-205ENST00000465950 SKOR2Q2VWA4 1001 aaPredicted RBP10.91□□□□□ -0.66
SCAF11-205ENST00000465950 MAP7D2Q96T17 732 aa10.91□□□□□ -0.66
SCAF11-205ENST00000465950 PRAG1Q86YV5 1406 aa10.91□□□□□ -0.66
SCAF11-205ENST00000465950 KDM4FA0A1W2PPD8 638 aa10.91□□□□□ -0.66
SCAF11-205ENST00000465950 ATP2B1P20020 1258 aa10.91□□□□□ -0.66
SCAF11-205ENST00000465950 BIRC2Q13490 618 aa10.91□□□□□ -0.66
SCAF11-205ENST00000465950 NOM1Q5C9Z4 860 aaKnown RBP10.91□□□□□ -0.66
SCAF11-205ENST00000465950 ABI1Q8IZP0 508 aa10.91□□□□□ -0.66
SCAF11-205ENST00000465950 TSR2Q969E8 191 aaKnown RBP10.91□□□□□ -0.66
SCAF11-205ENST00000465950 GNAT1P11488 350 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 CASTP20810 708 aaKnown RBP10.9□□□□□ -0.66
SCAF11-205ENST00000465950 ITGA6P23229 1130 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 UBE4AQ14139 1066 aa10.9□□□□□ -0.66
SCAF11-205ENST00000465950 EPB41L2O43491 1005 aaKnown RBP10.9□□□□□ -0.66
SCAF11-205ENST00000465950 USP40Q9NVE5 1235 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms