RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 ELL2O00472 640 aaPredicted RBP10.28□□□□□ -0.76
SHQ1-203ENST00000463369 SDSP20132 328 aa10.28□□□□□ -0.76
SHQ1-203ENST00000463369 KRT24Q2M2I5 525 aa10.28□□□□□ -0.76
SHQ1-203ENST00000463369 LONRF3Q496Y0 759 aa10.28□□□□□ -0.76
SHQ1-203ENST00000463369 C16orf71Q8IYS4 520 aaPredicted RBP10.28□□□□□ -0.76
SHQ1-203ENST00000463369 GABBR1Q9UBS5 961 aa10.28□□□□□ -0.76
SHQ1-203ENST00000463369 PNMA2Q9UL42 364 aa10.28□□□□□ -0.76
SHQ1-203ENST00000463369 HEG1Q9ULI3 1381 aa10.28□□□□□ -0.76
SHQ1-203ENST00000463369 BCL9O00512 1426 aa10.28□□□□□ -0.76
SHQ1-203ENST00000463369 SMTNL1A8MU46 457 aa10.27□□□□□ -0.76
SHQ1-203ENST00000463369 TULP2O00295 520 aa10.27□□□□□ -0.76
SHQ1-203ENST00000463369 CAPN15O75808 1086 aa10.27□□□□□ -0.76
SHQ1-203ENST00000463369 NEK4P51957 841 aa10.27□□□□□ -0.76
SHQ1-203ENST00000463369 SLC39A6Q13433 755 aa10.27□□□□□ -0.76
SHQ1-203ENST00000463369 MRPL50Q8N5N7 158 aaKnown RBP10.27□□□□□ -0.76
SHQ1-203ENST00000463369 TMEM87AQ8NBN3 555 aa10.27□□□□□ -0.76
SHQ1-203ENST00000463369 KIF18AQ8NI77 898 aa10.27□□□□□ -0.76
SHQ1-203ENST00000463369 TMOD3Q9NYL9 352 aa10.27□□□□□ -0.76
SHQ1-203ENST00000463369 TMA7Q9Y2S6 64 aaKnown RBP10.27□□□□□ -0.76
SHQ1-203ENST00000463369 GOLGA6L6A8MZA4 724 aa10.27□□□□□ -0.77
SHQ1-203ENST00000463369 AP5Z1O43299 807 aa10.27□□□□□ -0.77
SHQ1-203ENST00000463369 FAM193AP78312 1265 aa10.27□□□□□ -0.77
SHQ1-203ENST00000463369 EGFLAMQ63HQ2 1017 aa10.27□□□□□ -0.77
SHQ1-203ENST00000463369 PIGBQ92521 554 aa10.27□□□□□ -0.77
SHQ1-203ENST00000463369 KCPQ6ZWJ8 1503 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 hCG_2014768A0A024R1R8 64 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 ERC2O15083 957 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 HOXB7P09629 217 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 ADAMTS19Q8TE59 1207 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 SPACA7Q96KW9 195 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 CALCOCO1Q9P1Z2 691 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 FAN1Q9Y2M0 1017 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 ABCC4O15439 1325 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 ZNF831Q5JPB2 1677 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 TCHHQ07283 1943 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 RXRBP28702 533 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 NOP9Q86U38 636 aaKnown RBP10.26□□□□□ -0.77
SHQ1-203ENST00000463369 TTC5Q8N0Z6 440 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 KRT222Q8N1A0 295 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 SPOCK3Q9BQ16 436 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 FUCA2Q9BTY2 467 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 FAM53CQ9NYF3 392 aa10.26□□□□□ -0.77
SHQ1-203ENST00000463369 LY75O60449 1722 aa10.25□□□□□ -0.77
SHQ1-203ENST00000463369 GIGYF1O75420 1035 aaPredicted RBP10.25□□□□□ -0.77
SHQ1-203ENST00000463369 ERCC3P19447 782 aa10.25□□□□□ -0.77
SHQ1-203ENST00000463369 IGBP1P78318 339 aa10.25□□□□□ -0.77
SHQ1-203ENST00000463369 PTPROQ16827 1216 aa10.25□□□□□ -0.77
SHQ1-203ENST00000463369 ZFYVE27Q5T4F4 411 aa10.25□□□□□ -0.77
SHQ1-203ENST00000463369 MAGEC2Q9UBF1 373 aaPredicted RBP10.25□□□□□ -0.77
SHQ1-203ENST00000463369 PAXBP1Q9Y5B6 917 aa10.25□□□□□ -0.77
SHQ1-203ENST00000463369 WDR33Q9C0J8 1336 aaKnown RBP10.25□□□□□ -0.77
SHQ1-203ENST00000463369 CICQ96RK0 1608 aaPredicted RBP10.24□□□□□ -0.77
SHQ1-203ENST00000463369 ABL2P42684 1182 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 TAGLNQ01995 201 aaKnown RBP10.24□□□□□ -0.77
SHQ1-203ENST00000463369 POTEAQ6S8J7 498 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 NPAS4Q8IUM7 802 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 ACSBG1Q96GR2 724 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 ZNF496Q96IT1 587 aaPredicted RBP10.24□□□□□ -0.77
SHQ1-203ENST00000463369 FMNL2Q96PY5 1086 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 TAF1LQ8IZX4 1826 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 TLDC2A0PJX2 215 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 CAPN2P17655 700 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 FECHP22830 423 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 TJP1Q07157 1748 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 KRT27Q7Z3Y8 459 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 ZNF467Q7Z7K2 595 aaPredicted RBP10.24□□□□□ -0.77
SHQ1-203ENST00000463369 SPC24Q8NBT2 197 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 OTUD7AQ8TE49 926 aaPredicted RBP10.24□□□□□ -0.77
SHQ1-203ENST00000463369 SYTL4Q96C24 671 aaPredicted RBP10.24□□□□□ -0.77
SHQ1-203ENST00000463369 ATG3Q9NT62 314 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 CHPF2Q9P2E5 772 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 ASAP1Q9ULH1 1129 aa10.24□□□□□ -0.77
SHQ1-203ENST00000463369 SH3BP5O60239 455 aa10.23□□□□□ -0.77
SHQ1-203ENST00000463369 UBE2HP62256 183 aa10.23□□□□□ -0.77
SHQ1-203ENST00000463369 NAA30Q147X3 362 aaPredicted RBP10.23□□□□□ -0.77
SHQ1-203ENST00000463369 CCDC30Q5VVM6 783 aa10.23□□□□□ -0.77
SHQ1-203ENST00000463369 CREBRFQ8IUR6 639 aa10.23□□□□□ -0.77
SHQ1-203ENST00000463369 COL5A3P25940 1745 aaPredicted RBP10.23□□□□□ -0.77
SHQ1-203ENST00000463369 N4BP2Q86UW6 1770 aaPredicted RBP10.23□□□□□ -0.77
SHQ1-203ENST00000463369 SNRPA1P09661 255 aaKnown RBP10.22□□□□□ -0.77
SHQ1-203ENST00000463369 APLP1P51693 650 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 FAM182BQ5T319 152 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 CCDC112Q8NEF3 446 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 MTA3Q9BTC8 594 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 TSPYL1Q9H0U9 437 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 POLR3EQ9NVU0 708 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 EP400Q96L91 3159 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 MYH14Q7Z406 1995 aaKnown RBP10.22□□□□□ -0.77
SHQ1-203ENST00000463369 RPAP1Q9BWH6 1393 aaPredicted RBP10.22□□□□□ -0.77
SHQ1-203ENST00000463369 KCNQ2O43526 872 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 TNNT1P13805 278 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 PTGS1P23219 599 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 HDGFL1Q5TGJ6 251 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 ZNF397Q8NF99 534 aaPredicted RBP10.22□□□□□ -0.77
SHQ1-203ENST00000463369 SRCIN1Q9C0H9 1055 aa10.22□□□□□ -0.77
SHQ1-203ENST00000463369 RGS12O14924 1447 aa10.21□□□□□ -0.77
SHQ1-203ENST00000463369 PRAMEF22A3QJZ6 481 aa10.21□□□□□ -0.77
SHQ1-203ENST00000463369 FAM196AQ6ZSG2 479 aa10.21□□□□□ -0.77
SHQ1-203ENST00000463369 NLGN1Q8N2Q7 840 aa10.21□□□□□ -0.77
SHQ1-203ENST00000463369 ANKRD44Q8N8A2 993 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms