RNA–Protein interactions for RNA: ENST00000463058.5

HHLA3-204, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 2

Gene HHLA3, Length 832 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-204ENST00000463058 HEG1Q9ULI3 1381 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 FANCIQ9NVI1 1328 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 ZC3H4Q9UPT8 1303 aaKnown RBP8.92□□□□□ -0.98
HHLA3-204ENST00000463058 PRAMEF22A3QJZ6 481 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 PIK3CDO00329 1044 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 GIGYF1O75420 1035 aaPredicted RBP8.92□□□□□ -0.98
HHLA3-204ENST00000463058 CTHP32929 405 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 KCNH2Q12809 1159 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 ITPK1Q13572 414 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 TBC1D9Q6ZT07 1266 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 NPM2Q86SE8 214 aaKnown RBP8.92□□□□□ -0.98
HHLA3-204ENST00000463058 COL23A1Q86Y22 540 aaPredicted RBP8.92□□□□□ -0.98
HHLA3-204ENST00000463058 C8orf58Q8NAV2 365 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 PBXIP1Q96AQ6 731 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 SLC4A9Q96Q91 983 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 TRAIPQ9BWF2 469 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 PODXL2Q9NZ53 605 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 CHD4Q14839 1912 aa8.92□□□□□ -0.98
HHLA3-204ENST00000463058 CEP350Q5VT06 3117 aa8.91□□□□□ -0.98
HHLA3-204ENST00000463058 DOT1LQ8TEK3 1739 aa8.91□□□□□ -0.98
HHLA3-204ENST00000463058 SHANK3Q9BYB0 1731 aa8.91□□□□□ -0.98
HHLA3-204ENST00000463058 C1QTNF8P60827 252 aa8.91□□□□□ -0.98
HHLA3-204ENST00000463058 TWISTNBQ3B726 338 aaPredicted RBP8.91□□□□□ -0.98
HHLA3-204ENST00000463058 PTCRAQ6ISU1 281 aaPredicted RBP8.91□□□□□ -0.98
HHLA3-204ENST00000463058 TSPYL6Q8N831 410 aa8.91□□□□□ -0.98
HHLA3-204ENST00000463058 TFIP11Q9UBB9 837 aaKnown RBP8.91□□□□□ -0.98
HHLA3-204ENST00000463058 MAFBQ9Y5Q3 323 aaPredicted RBP8.91□□□□□ -0.98
HHLA3-204ENST00000463058 USP16Q9Y5T5 823 aa8.91□□□□□ -0.98
HHLA3-204ENST00000463058 TUBGCP6Q96RT7 1819 aa8.91□□□□□ -0.98
HHLA3-204ENST00000463058 MRC1P22897 1456 aa8.9□□□□□ -0.98
HHLA3-204ENST00000463058 TCERG1O14776 1098 aaKnown RBP8.9□□□□□ -0.98
HHLA3-204ENST00000463058 A1BGP04217 495 aa8.9□□□□□ -0.98
HHLA3-204ENST00000463058 CYP19A1P11511 503 aaPredicted RBP8.9□□□□□ -0.98
HHLA3-204ENST00000463058 YBX3P16989 372 aaKnown RBP eCLIP8.9□□□□□ -0.986e-6■■■■□ 20
HHLA3-204ENST00000463058 CANXP27824 592 aaKnown RBP8.9□□□□□ -0.98
HHLA3-204ENST00000463058 CRKLP46109 303 aaKnown RBP8.9□□□□□ -0.98
HHLA3-204ENST00000463058 MSL1Q68DK7 614 aa8.9□□□□□ -0.98
HHLA3-204ENST00000463058 NYAP1Q6ZVC0 841 aa8.9□□□□□ -0.98
HHLA3-204ENST00000463058 LINC00116Q8NCU8 138 aa8.9□□□□□ -0.98
HHLA3-204ENST00000463058 CHMP4AQ9BY43 222 aa8.9□□□□□ -0.98
HHLA3-204ENST00000463058 QSER1Q2KHR3 1735 aa8.9□□□□□ -0.98
HHLA3-204ENST00000463058 LY75O60449 1722 aa8.89□□□□□ -0.99
HHLA3-204ENST00000463058 COL24A1Q17RW2 1714 aa8.89□□□□□ -0.99
HHLA3-204ENST00000463058 PIP4K2AP48426 406 aaPredicted RBP8.89□□□□□ -0.99
HHLA3-204ENST00000463058 PTPN5P54829 565 aa8.89□□□□□ -0.99
HHLA3-204ENST00000463058 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
HHLA3-204ENST00000463058 CCDC30Q5VVM6 783 aa8.89□□□□□ -0.99
HHLA3-204ENST00000463058 PNMA1Q8ND90 353 aa8.89□□□□□ -0.99
HHLA3-204ENST00000463058 CCDC87Q9NVE4 849 aa8.89□□□□□ -0.99
HHLA3-204ENST00000463058 RTCBQ9Y3I0 505 aaKnown RBP8.89□□□□□ -0.99
HHLA3-204ENST00000463058 VAMP4O75379 141 aa8.88□□□□□ -0.99
HHLA3-204ENST00000463058 HOXB7P09629 217 aa8.88□□□□□ -0.99
HHLA3-204ENST00000463058 MYL6BP14649 208 aa8.88□□□□□ -0.99
HHLA3-204ENST00000463058 LMOD1P29536 600 aaPredicted RBP8.88□□□□□ -0.99
HHLA3-204ENST00000463058 RC3H1Q5TC82 1133 aaKnown RBP8.88□□□□□ -0.99
HHLA3-204ENST00000463058 TRMT2AQ8IZ69 625 aaKnown RBP8.88□□□□□ -0.99
HHLA3-204ENST00000463058 FAM174AQ8TBP5 190 aa8.88□□□□□ -0.99
HHLA3-204ENST00000463058 STK31Q9BXU1 1019 aa8.88□□□□□ -0.99
HHLA3-204ENST00000463058 SCN11AQ9UI33 1791 aa8.88□□□□□ -0.99
HHLA3-204ENST00000463058 TOGARAM1Q9Y4F4 1720 aa8.88□□□□□ -0.99
HHLA3-204ENST00000463058 SOS1Q07889 1333 aaPredicted RBP8.87□□□□□ -0.99
HHLA3-204ENST00000463058 RPS6KA4O75676 772 aa8.87□□□□□ -0.99
HHLA3-204ENST00000463058 ANXA1P04083 346 aa8.87□□□□□ -0.99
HHLA3-204ENST00000463058 TRAPPC3LQ5T215 181 aa8.87□□□□□ -0.99
HHLA3-204ENST00000463058 INTS5Q6P9B9 1019 aaKnown RBP8.87□□□□□ -0.99
HHLA3-204ENST00000463058 SMIM5Q71RC9 77 aa8.87□□□□□ -0.99
HHLA3-204ENST00000463058 AMIGO3Q86WK7 504 aa8.87□□□□□ -0.99
HHLA3-204ENST00000463058 NKX2-3Q8TAU0 364 aa8.87□□□□□ -0.99
HHLA3-204ENST00000463058 DBF4Q9UBU7 674 aaPredicted RBP8.87□□□□□ -0.99
HHLA3-204ENST00000463058 ZBTB1Q9Y2K1 713 aa8.87□□□□□ -0.99
HHLA3-204ENST00000463058 DLG5Q8TDM6 1919 aa8.87□□□□□ -0.99
HHLA3-204ENST00000463058 CNTNAP4Q9C0A0 1308 aa8.86□□□□□ -0.99
HHLA3-204ENST00000463058 ADAMTS7Q9UKP4 1686 aa8.86□□□□□ -0.99
HHLA3-204ENST00000463058 CARNS1A5YM72 827 aa8.86□□□□□ -0.99
HHLA3-204ENST00000463058 ATP9BO43861 1147 aa8.86□□□□□ -0.99
HHLA3-204ENST00000463058 RFC4P35249 363 aa8.86□□□□□ -0.99
HHLA3-204ENST00000463058 AIMP1Q12904 312 aaKnown RBP8.86□□□□□ -0.99
HHLA3-204ENST00000463058 PDXDC2PQ6P474 469 aa8.86□□□□□ -0.99
HHLA3-204ENST00000463058 FLAD1Q8NFF5 587 aa8.86□□□□□ -0.99
HHLA3-204ENST00000463058 UNC93B1Q9H1C4 597 aa8.86□□□□□ -0.99
HHLA3-204ENST00000463058 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
HHLA3-204ENST00000463058 DDX21Q9NR30 783 aaKnown RBP eCLIP8.86□□□□□ -0.99
HHLA3-204ENST00000463058 CHPF2Q9P2E5 772 aa8.86□□□□□ -0.99
HHLA3-204ENST00000463058 KCPQ6ZWJ8 1503 aa8.85□□□□□ -0.99
HHLA3-204ENST00000463058 ITGB4P16144 1822 aa8.85□□□□□ -0.99
HHLA3-204ENST00000463058 A0A087WZG4 1122 aa8.85□□□□□ -0.99
HHLA3-204ENST00000463058 GRIN3BO60391 1043 aa8.85□□□□□ -0.99
HHLA3-204ENST00000463058 CT47B1P0C2W7 299 aaPredicted RBP8.85□□□□□ -0.99
HHLA3-204ENST00000463058 IL6STP40189 918 aaPredicted RBP8.85□□□□□ -0.99
HHLA3-204ENST00000463058 NBPF10Q6P3W6 841 aaKnown RBP8.85□□□□□ -0.99
HHLA3-204ENST00000463058 SH3BP5LQ7L8J4 393 aa8.85□□□□□ -0.99
HHLA3-204ENST00000463058 NBPF15Q8N660 670 aa8.85□□□□□ -0.99
HHLA3-204ENST00000463058 BCL2L13Q9BXK5 485 aa8.85□□□□□ -0.99
HHLA3-204ENST00000463058 SLC6A16Q9GZN6 736 aa8.85□□□□□ -0.99
HHLA3-204ENST00000463058 HYPKQ9NX55 129 aa8.85□□□□□ -0.99
HHLA3-204ENST00000463058 GPSM3Q9Y4H4 160 aa8.85□□□□□ -0.99
HHLA3-204ENST00000463058 C5P01031 1676 aa8.85□□□□□ -0.99
HHLA3-204ENST00000463058 ERBB4Q15303 1308 aa8.84□□□□□ -0.99
HHLA3-204ENST00000463058 S1PR4O95977 384 aa8.84□□□□□ -0.99
HHLA3-204ENST00000463058 SSFA2P28290 1259 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms