RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 CWC25Q9NXE8 425 aaPredicted RBP14.05□□□□□ -0.16
CBX3-205ENST00000462165 TM4SF4P48230 202 aa14.04□□□□□ -0.16
CBX3-205ENST00000462165 NOM1Q5C9Z4 860 aaKnown RBP14.04□□□□□ -0.16
CBX3-205ENST00000462165 MOB2Q70IA6 237 aa14.04□□□□□ -0.16
CBX3-205ENST00000462165 ZNF296Q8WUU4 475 aaPredicted RBP14.04□□□□□ -0.16
CBX3-205ENST00000462165 CCDC85AQ96PX6 553 aaPredicted RBP14.04□□□□□ -0.16
CBX3-205ENST00000462165 METTL22Q9BUU2 404 aaPredicted RBP14.04□□□□□ -0.16
CBX3-205ENST00000462165 ADAMTS8Q9UP79 889 aa14.04□□□□□ -0.16
CBX3-205ENST00000462165 HTTP42858 3142 aa14.04□□□□□ -0.16
CBX3-205ENST00000462165 MED23Q9ULK4 1368 aa14.04□□□□□ -0.16
CBX3-205ENST00000462165 MKI67P46013 3256 aaKnown RBP14.04□□□□□ -0.16
CBX3-205ENST00000462165 CENPFP49454 3210 aa14.03□□□□□ -0.16
CBX3-205ENST00000462165 UBE2Q2LH0YL09 131 aa14.03□□□□□ -0.16
CBX3-205ENST00000462165 TBC1D8O95759 1140 aa14.03□□□□□ -0.16
CBX3-205ENST00000462165 NBPF9Q3BBW0 867 aa14.03□□□□□ -0.16
CBX3-205ENST00000462165 HDAC9Q9UKV0 1011 aa14.03□□□□□ -0.16
CBX3-205ENST00000462165 SCAF8Q9UPN6 1271 aaKnown RBP14.03□□□□□ -0.16
CBX3-205ENST00000462165 MYO3BQ8WXR4 1341 aa14.02□□□□□ -0.17
CBX3-205ENST00000462165 WNT10BO00744 389 aa14.02□□□□□ -0.17
CBX3-205ENST00000462165 DACT2Q5SW24 774 aa14.02□□□□□ -0.17
CBX3-205ENST00000462165 PRAMEF18Q5VWM3 479 aa14.02□□□□□ -0.17
CBX3-205ENST00000462165 JARID2Q92833 1246 aaPredicted RBP14.02□□□□□ -0.17
CBX3-205ENST00000462165 CDC5LQ99459 802 aaKnown RBP14.02□□□□□ -0.17
CBX3-205ENST00000462165 IFT57Q9NWB7 429 aa14.02□□□□□ -0.17
CBX3-205ENST00000462165 GPR25O00155 361 aa14.01□□□□□ -0.17
CBX3-205ENST00000462165 ELL2O00472 640 aaPredicted RBP14.01□□□□□ -0.17
CBX3-205ENST00000462165 DDX58O95786 925 aaKnown RBP14.01□□□□□ -0.17
CBX3-205ENST00000462165 NF2P35240 595 aa14.01□□□□□ -0.17
CBX3-205ENST00000462165 MMP14P50281 582 aa14.01□□□□□ -0.17
CBX3-205ENST00000462165 CTSWP56202 376 aa14.01□□□□□ -0.17
CBX3-205ENST00000462165 GNAI1P63096 354 aa14.01□□□□□ -0.17
CBX3-205ENST00000462165 OGFOD1Q8N543 542 aa14.01□□□□□ -0.17
CBX3-205ENST00000462165 CFHR5Q9BXR6 569 aa14.01□□□□□ -0.17
CBX3-205ENST00000462165 BSDC1Q9NW68 430 aaPredicted RBP14.01□□□□□ -0.17
CBX3-205ENST00000462165 MINPP1Q9UNW1 487 aa14.01□□□□□ -0.17
CBX3-205ENST00000462165 LAMB1P07942 1786 aa14.01□□□□□ -0.17
CBX3-205ENST00000462165 WTIPA6NIX2 430 aaPredicted RBP14□□□□□ -0.17
CBX3-205ENST00000462165 CCT4P50991 539 aaKnown RBP14□□□□□ -0.17
CBX3-205ENST00000462165 SREBF2Q12772 1141 aa14□□□□□ -0.17
CBX3-205ENST00000462165 TTLL12Q14166 644 aaPredicted RBP14□□□□□ -0.17
CBX3-205ENST00000462165 STRIP1Q5VSL9 837 aa14□□□□□ -0.17
CBX3-205ENST00000462165 FBXO46Q6PJ61 603 aaPredicted RBP14□□□□□ -0.17
CBX3-205ENST00000462165 TTLL11Q8NHH1 800 aa14□□□□□ -0.17
CBX3-205ENST00000462165 MXD3Q9BW11 206 aa14□□□□□ -0.17
CBX3-205ENST00000462165 ECM29Q5VYK3 1845 aa13.99□□□□□ -0.17
CBX3-205ENST00000462165 CALD1Q05682 793 aaKnown RBP13.99□□□□□ -0.17
CBX3-205ENST00000462165 CCDC30Q5VVM6 783 aa13.99□□□□□ -0.17
CBX3-205ENST00000462165 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
CBX3-205ENST00000462165 C8orf58Q8NAV2 365 aa13.99□□□□□ -0.17
CBX3-205ENST00000462165 CHMP4AQ9BY43 222 aa13.99□□□□□ -0.17
CBX3-205ENST00000462165 COA1Q9GZY4 146 aa13.99□□□□□ -0.17
CBX3-205ENST00000462165 GREM2Q9H772 168 aa13.99□□□□□ -0.17
CBX3-205ENST00000462165 MAP3K2Q9Y2U5 619 aa13.99□□□□□ -0.17
CBX3-205ENST00000462165 IGKV5-2P06315 115 aa13.98□□□□□ -0.17
CBX3-205ENST00000462165 PTPN12Q05209 780 aaKnown RBP13.98□□□□□ -0.17
CBX3-205ENST00000462165 LEMD3Q9Y2U8 911 aa13.98□□□□□ -0.17
CBX3-205ENST00000462165 BRCA2P51587 3418 aa13.97□□□□□ -0.17
CBX3-205ENST00000462165 PI4KAP2A4QPH2 592 aa13.97□□□□□ -0.17
CBX3-205ENST00000462165 FKTNO75072 461 aa13.97□□□□□ -0.17
CBX3-205ENST00000462165 SASH1O94885 1247 aa13.97□□□□□ -0.17
CBX3-205ENST00000462165 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
CBX3-205ENST00000462165 LDLRAD1Q5T700 205 aa13.97□□□□□ -0.17
CBX3-205ENST00000462165 TTLL5Q6EMB2 1281 aa13.97□□□□□ -0.17
CBX3-205ENST00000462165 KSR2Q6VAB6 950 aa13.97□□□□□ -0.17
CBX3-205ENST00000462165 ARMC9Q7Z3E5 817 aa13.97□□□□□ -0.17
CBX3-205ENST00000462165 TXNRD3Q86VQ6 643 aa13.97□□□□□ -0.17
CBX3-205ENST00000462165 APOBEC3FQ8IUX4 373 aaKnown RBP13.97□□□□□ -0.17
CBX3-205ENST00000462165 PI4KAP1Q8N8J0 262 aa13.97□□□□□ -0.17
CBX3-205ENST00000462165 FBXW7Q969H0 707 aa13.97□□□□□ -0.17
CBX3-205ENST00000462165 COL1A1P02452 1464 aaPredicted RBP13.97□□□□□ -0.17
CBX3-205ENST00000462165 APAF1O14727 1248 aa13.96□□□□□ -0.17
CBX3-205ENST00000462165 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.17
CBX3-205ENST00000462165 SPRYD7Q5W111 196 aa13.96□□□□□ -0.17
CBX3-205ENST00000462165 ZBED3Q96IU2 234 aaPredicted RBP13.96□□□□□ -0.17
CBX3-205ENST00000462165 R3HDMLQ9H3Y0 253 aa13.96□□□□□ -0.17
CBX3-205ENST00000462165 ALDH1A1P00352 501 aa13.95□□□□□ -0.18
CBX3-205ENST00000462165 IGHMBP2P38935 993 aaKnown RBP13.95□□□□□ -0.18
CBX3-205ENST00000462165 NEXNQ0ZGT2 675 aa13.95□□□□□ -0.18
CBX3-205ENST00000462165 ZNF804BA4D1E1 1349 aa13.94□□□□□ -0.18
CBX3-205ENST00000462165 A0A1B0GUL6 1792 aa13.94□□□□□ -0.18
CBX3-205ENST00000462165 RBBP6Q7Z6E9 1792 aaKnown RBP13.94□□□□□ -0.18
CBX3-205ENST00000462165 NEURL1BA8MQ27 555 aa13.94□□□□□ -0.18
CBX3-205ENST00000462165 H7C1W4 665 aa13.94□□□□□ -0.18
CBX3-205ENST00000462165 INHBEP58166 350 aa13.94□□□□□ -0.18
CBX3-205ENST00000462165 PRKG1Q13976 671 aa13.94□□□□□ -0.18
CBX3-205ENST00000462165 MAP3K11Q16584 847 aa13.94□□□□□ -0.18
CBX3-205ENST00000462165 CWF19L2Q2TBE0 894 aaKnown RBP13.94□□□□□ -0.18
CBX3-205ENST00000462165 KIAA0825Q8IV33 1275 aa13.94□□□□□ -0.18
CBX3-205ENST00000462165 TSPYL6Q8N831 410 aa13.94□□□□□ -0.18
CBX3-205ENST00000462165 PLA2G12BQ9BX93 195 aa13.94□□□□□ -0.18
CBX3-205ENST00000462165 ANKRD2Q9GZV1 360 aa13.94□□□□□ -0.18
CBX3-205ENST00000462165 ANGEL1Q9UNK9 670 aaKnown RBP13.94□□□□□ -0.18
CBX3-205ENST00000462165 KLRK1P26718 216 aa13.93□□□□□ -0.18
CBX3-205ENST00000462165 GTF2IP78347 998 aa13.93□□□□□ -0.18
CBX3-205ENST00000462165 GCC1Q96CN9 775 aa13.93□□□□□ -0.18
CBX3-205ENST00000462165 CACNA1FO60840 1977 aa13.92□□□□□ -0.18
CBX3-205ENST00000462165 MANSC4A6NHS7 340 aaPredicted RBP13.92□□□□□ -0.18
CBX3-205ENST00000462165 ZBTB48P10074 688 aaPredicted RBP13.92□□□□□ -0.18
CBX3-205ENST00000462165 ITGA6P23229 1130 aa13.92□□□□□ -0.18
CBX3-205ENST00000462165 UBE3BQ7Z3V4 1068 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms