RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 CREB3L3Q68CJ9 461 aa4.9□□□□□ -1.63
ATP13A3-206ENST00000461660 SPTY2D1Q68D10 685 aaPredicted RBP4.9□□□□□ -1.63
ATP13A3-206ENST00000461660 ZNF804AQ7Z570 1209 aa4.9□□□□□ -1.63
ATP13A3-206ENST00000461660 NAPBQ9H115 298 aa4.9□□□□□ -1.63
ATP13A3-206ENST00000461660 BSDC1Q9NW68 430 aaPredicted RBP4.9□□□□□ -1.63
ATP13A3-206ENST00000461660 DENND2AQ9ULE3 1009 aa4.9□□□□□ -1.63
ATP13A3-206ENST00000461660 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.9□□□□□ -1.63
ATP13A3-206ENST00000461660 SIPA1L3O60292 1781 aaPredicted RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 MMP10P09238 476 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 HMGB1P09429 215 aaKnown RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 CYP7A1P22680 504 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 HSPA4P34932 840 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 PDE6BP35913 854 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 CPLX2Q6PUV4 134 aaKnown RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 SYNE3Q6ZMZ3 975 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 CCDC129Q6ZRS4 1044 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 TICAM2Q86XR7 235 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 ZGPATQ8N5A5 531 aaKnown RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 CELF1Q92879 486 aaKnown RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 ZSCAN31Q96LW9 406 aaPredicted RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 CWC22Q9HCG8 908 aaKnown RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 GGA1Q9UJY5 639 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 ZNF609O15014 1411 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 LAMB4A4D0S4 1761 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 ZNF213O14771 459 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 PTMSP20962 102 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 GYG1P46976 350 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 BCAMP50895 628 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 GRAPQ13588 217 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 SLC10A5Q5PT55 438 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 NAA16Q6N069 864 aaPredicted RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 MAGEB6Q8N7X4 407 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 FAM184AQ8NB25 1140 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 GRAPLQ8TC17 118 aaPredicted RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 LRRC4BQ9NT99 713 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 PPP1R1BQ9UD71 204 aaPredicted RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 TAOK2Q9UL54 1235 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 LIMCH1Q9UPQ0 1083 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 RFX7Q2KHR2 1363 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 NRAPQ86VF7 1730 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 ABCC12Q96J65 1359 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 ZNF804BA4D1E1 1349 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 ERICH2A1L162 156 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 CPLX1O14810 134 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 PLSCR1O15162 318 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 LDHCP07864 332 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 SLC3A2P08195 630 aaKnown RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 GYS1P13807 737 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 SART3Q15020 963 aaKnown RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 RRP12Q5JTH9 1297 aaKnown RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 FOXD4L5Q5VV16 416 aaPredicted RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 PRR5LQ6MZQ0 368 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 NFXL1Q6ZNB6 911 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 TMC4Q7Z404 712 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 FOXD4L4Q8WXT5 416 aaPredicted RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 NEK1Q96PY6 1258 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 ZC3H12CQ9C0D7 883 aaKnown RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 LSG1Q9H089 658 aaKnown RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 SH2B1Q9NRF2 756 aaPredicted RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 ZNF219Q9P2Y4 722 aaPredicted RBP4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 MINPP1Q9UNW1 487 aa4.89□□□□□ -1.63
ATP13A3-206ENST00000461660 RTL9Q8NET4 1388 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 XDHP47989 1333 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 DDX11L8A8MPP1 907 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 H0YIN7 160 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 SNAP23O00161 211 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 SLC27A2O14975 620 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 GPAA1O43292 621 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 BBOX1O75936 387 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 MBD4O95243 580 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 PDE6AP16499 860 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 HAND2P61296 217 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 PTH1RQ03431 593 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 EN1Q05925 392 aaPredicted RBP4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 ZMYM1Q5SVZ6 1142 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 PI16Q6UXB8 463 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 ANTXR1Q9H6X2 564 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 BCL2L12Q9HB09 334 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 PALD1Q9ULE6 856 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 LEMD3Q9Y2U8 911 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 SNX14Q9Y5W7 946 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 ZNF532Q9HCE3 1301 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 SEMA3EO15041 775 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 GNAT2P19087 354 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 ATP2B4P23634 1241 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 ALDH1B1P30837 517 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 RASGRF1Q13972 1273 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 SLF2Q8IX21 1173 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 TMX3Q96JJ7 454 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 SEC62Q99442 399 aaKnown RBP4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 ATP6V1DQ9Y5K8 247 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 TOGARAM1Q9Y4F4 1720 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 MAGEB6P1A0A0J9YX57 407 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 H3BQV1 296 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 PDCP20941 246 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 POLD1P28340 1107 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 MCAMP43121 646 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 GSTO1P78417 241 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 UBE3CQ15386 1083 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 NFKBIBQ15653 356 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms